Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07235 and SGL_RS07240 are separated by 105 nucleotides SGL_RS07240 and SGL_RS07245 are separated by 117 nucleotides SGL_RS07245 and SGL_RS07250 overlap by 1 nucleotides
SGL_RS07235: SGL_RS07235 - lipoyl synthase, at 1,150,122 to 1,151,033
_RS07235
SGL_RS07240: SGL_RS07240 - aldo/keto reductase, at 1,151,139 to 1,152,431
_RS07240
SGL_RS07245: SGL_RS07245 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,152,549 to 1,153,292
_RS07245
SGL_RS07250: SGL_RS07250 - aminotransferase class IV, at 1,153,292 to 1,154,101
_RS07250
Position (kb)
1151
1152
1153 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1150.642 kb on - strand, within SGL_RS07235 at 1150.669 kb on + strand, within SGL_RS07235 at 1151.003 kb on - strand at 1151.156 kb on + strand at 1151.314 kb on - strand, within SGL_RS07240 at 1151.317 kb on + strand, within SGL_RS07240 at 1151.322 kb on + strand, within SGL_RS07240 at 1151.414 kb on + strand, within SGL_RS07240 at 1151.421 kb on + strand, within SGL_RS07240 at 1151.434 kb on - strand, within SGL_RS07240 at 1151.449 kb on + strand, within SGL_RS07240 at 1151.455 kb on + strand, within SGL_RS07240 at 1151.463 kb on - strand, within SGL_RS07240 at 1151.473 kb on + strand, within SGL_RS07240 at 1151.494 kb on + strand, within SGL_RS07240 at 1151.556 kb on + strand, within SGL_RS07240 at 1151.664 kb on + strand, within SGL_RS07240 at 1151.671 kb on - strand, within SGL_RS07240 at 1151.709 kb on - strand, within SGL_RS07240 at 1151.711 kb on - strand, within SGL_RS07240 at 1151.762 kb on - strand, within SGL_RS07240 at 1151.800 kb on + strand, within SGL_RS07240 at 1151.906 kb on - strand, within SGL_RS07240 at 1151.984 kb on - strand, within SGL_RS07240 at 1152.138 kb on + strand, within SGL_RS07240 at 1152.191 kb on + strand, within SGL_RS07240 at 1152.199 kb on - strand, within SGL_RS07240 at 1152.208 kb on + strand, within SGL_RS07240 at 1152.209 kb on - strand, within SGL_RS07240 at 1152.268 kb on + strand, within SGL_RS07240 at 1152.272 kb on + strand, within SGL_RS07240 at 1152.351 kb on - strand at 1152.420 kb on - strand at 1152.420 kb on - strand at 1152.463 kb on - strand at 1152.470 kb on - strand at 1153.323 kb on + strand at 1153.363 kb on + strand at 1153.371 kb on - strand at 1153.371 kb on - strand at 1153.397 kb on - strand, within SGL_RS07250 at 1153.428 kb on - strand, within SGL_RS07250
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 1,150,642 - SGL_RS07235 0.57 +0.3 1,150,669 + SGL_RS07235 0.60 +0.0 1,151,003 - -1.5 1,151,156 + -1.3 1,151,314 - SGL_RS07240 0.14 -1.2 1,151,317 + SGL_RS07240 0.14 -1.4 1,151,322 + SGL_RS07240 0.14 +0.3 1,151,414 + SGL_RS07240 0.21 -2.2 1,151,421 + SGL_RS07240 0.22 -2.0 1,151,434 - SGL_RS07240 0.23 -2.1 1,151,449 + SGL_RS07240 0.24 -0.6 1,151,455 + SGL_RS07240 0.24 -2.1 1,151,463 - SGL_RS07240 0.25 -1.8 1,151,473 + SGL_RS07240 0.26 -3.0 1,151,494 + SGL_RS07240 0.27 +0.4 1,151,556 + SGL_RS07240 0.32 -0.5 1,151,664 + SGL_RS07240 0.41 -0.9 1,151,671 - SGL_RS07240 0.41 -2.3 1,151,709 - SGL_RS07240 0.44 -1.6 1,151,711 - SGL_RS07240 0.44 -1.3 1,151,762 - SGL_RS07240 0.48 -0.5 1,151,800 + SGL_RS07240 0.51 -1.8 1,151,906 - SGL_RS07240 0.59 -1.2 1,151,984 - SGL_RS07240 0.65 -2.1 1,152,138 + SGL_RS07240 0.77 -0.7 1,152,191 + SGL_RS07240 0.81 +1.2 1,152,199 - SGL_RS07240 0.82 -1.8 1,152,208 + SGL_RS07240 0.83 -1.9 1,152,209 - SGL_RS07240 0.83 -1.3 1,152,268 + SGL_RS07240 0.87 -3.3 1,152,272 + SGL_RS07240 0.88 -1.3 1,152,351 - -0.8 1,152,420 - +0.9 1,152,420 - +0.6 1,152,463 - -0.1 1,152,470 - -0.5 1,153,323 + -0.7 1,153,363 + -1.1 1,153,371 - +0.1 1,153,371 - -1.3 1,153,397 - SGL_RS07250 0.13 +0.7 1,153,428 - SGL_RS07250 0.17 +0.7
Or see this region's nucleotide sequence