Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06420 and SGL_RS06425 are separated by 98 nucleotides SGL_RS06425 and SGL_RS06430 are separated by 289 nucleotides
SGL_RS06420: SGL_RS06420 - hypothetical protein, at 972,485 to 973,954
_RS06420
SGL_RS06425: SGL_RS06425 - ATP-dependent DNA helicase RecQ, at 974,053 to 975,489
_RS06425
SGL_RS06430: SGL_RS06430 - glycosyltransferase family 2 protein, at 975,779 to 976,648
_RS06430
Position (kb) 974
975
976 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 973.238 kb on - strand, within SGL_RS06420 at 973.285 kb on - strand, within SGL_RS06420 at 973.287 kb on - strand, within SGL_RS06420 at 973.337 kb on + strand, within SGL_RS06420 at 973.337 kb on + strand, within SGL_RS06420 at 973.356 kb on - strand, within SGL_RS06420 at 973.453 kb on - strand, within SGL_RS06420 at 973.579 kb on - strand, within SGL_RS06420 at 973.626 kb on + strand, within SGL_RS06420 at 973.705 kb on - strand, within SGL_RS06420 at 973.897 kb on - strand at 974.022 kb on - strand at 974.126 kb on - strand at 974.167 kb on + strand at 974.230 kb on + strand, within SGL_RS06425 at 974.238 kb on - strand, within SGL_RS06425 at 974.366 kb on - strand, within SGL_RS06425 at 974.551 kb on + strand, within SGL_RS06425 at 974.572 kb on - strand, within SGL_RS06425 at 974.681 kb on + strand, within SGL_RS06425 at 974.825 kb on + strand, within SGL_RS06425 at 974.852 kb on + strand, within SGL_RS06425 at 975.047 kb on - strand, within SGL_RS06425 at 975.047 kb on - strand, within SGL_RS06425 at 975.203 kb on + strand, within SGL_RS06425 at 975.211 kb on - strand, within SGL_RS06425 at 975.289 kb on - strand, within SGL_RS06425 at 975.316 kb on - strand, within SGL_RS06425 at 975.376 kb on - strand at 975.461 kb on + strand at 975.572 kb on - strand at 975.840 kb on + strand at 975.982 kb on + strand, within SGL_RS06430 at 976.009 kb on + strand, within SGL_RS06430 at 976.400 kb on + strand, within SGL_RS06430
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 973,238 - SGL_RS06420 0.51 -0.8 973,285 - SGL_RS06420 0.54 -1.4 973,287 - SGL_RS06420 0.55 -0.6 973,337 + SGL_RS06420 0.58 -1.3 973,337 + SGL_RS06420 0.58 -1.8 973,356 - SGL_RS06420 0.59 +0.0 973,453 - SGL_RS06420 0.66 +1.1 973,579 - SGL_RS06420 0.74 -0.8 973,626 + SGL_RS06420 0.78 -0.7 973,705 - SGL_RS06420 0.83 -0.6 973,897 - +0.1 974,022 - -1.0 974,126 - -0.7 974,167 + +0.1 974,230 + SGL_RS06425 0.12 -0.4 974,238 - SGL_RS06425 0.13 +0.6 974,366 - SGL_RS06425 0.22 -0.9 974,551 + SGL_RS06425 0.35 +1.4 974,572 - SGL_RS06425 0.36 -0.5 974,681 + SGL_RS06425 0.44 +0.6 974,825 + SGL_RS06425 0.54 -0.3 974,852 + SGL_RS06425 0.56 -0.6 975,047 - SGL_RS06425 0.69 +0.1 975,047 - SGL_RS06425 0.69 +0.4 975,203 + SGL_RS06425 0.80 -1.6 975,211 - SGL_RS06425 0.81 -1.3 975,289 - SGL_RS06425 0.86 -4.2 975,316 - SGL_RS06425 0.88 -0.8 975,376 - -1.6 975,461 + -1.9 975,572 - -3.8 975,840 + -0.9 975,982 + SGL_RS06430 0.23 -1.8 976,009 + SGL_RS06430 0.26 -0.3 976,400 + SGL_RS06430 0.71 -0.3
Or see this region's nucleotide sequence