Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04250 and SGL_RS04255 are separated by 35 nucleotides SGL_RS04255 and SGL_RS04260 are separated by 88 nucleotides SGL_RS04260 and SGL_RS04265 are separated by 92 nucleotides
SGL_RS04250: SGL_RS04250 - enoyl-ACP reductase FabI, at 503,943 to 504,719
_RS04250
SGL_RS04255: SGL_RS04255 - tetratricopeptide repeat protein, at 504,755 to 505,267
_RS04255
SGL_RS04260: SGL_RS04260 - DUF2993 domain-containing protein, at 505,356 to 506,159
_RS04260
SGL_RS04265: SGL_RS04265 - calcium-binding protein, at 506,252 to 508,027
_RS04265
Position (kb) 505
506
507 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 504.439 kb on - strand, within SGL_RS04250 at 504.530 kb on - strand, within SGL_RS04250 at 504.816 kb on + strand, within SGL_RS04255 at 504.875 kb on + strand, within SGL_RS04255 at 504.899 kb on + strand, within SGL_RS04255 at 504.921 kb on - strand, within SGL_RS04255 at 504.946 kb on - strand, within SGL_RS04255 at 504.990 kb on - strand, within SGL_RS04255 at 505.007 kb on + strand, within SGL_RS04255 at 505.058 kb on - strand, within SGL_RS04255 at 505.132 kb on - strand, within SGL_RS04255 at 505.202 kb on + strand, within SGL_RS04255 at 505.217 kb on - strand at 505.343 kb on + strand at 505.435 kb on - strand at 505.507 kb on + strand, within SGL_RS04260 at 505.507 kb on + strand, within SGL_RS04260 at 505.515 kb on - strand, within SGL_RS04260 at 505.571 kb on - strand, within SGL_RS04260 at 505.665 kb on + strand, within SGL_RS04260 at 505.665 kb on + strand, within SGL_RS04260 at 505.665 kb on + strand, within SGL_RS04260 at 505.680 kb on + strand, within SGL_RS04260 at 505.698 kb on + strand, within SGL_RS04260 at 505.782 kb on - strand, within SGL_RS04260 at 505.786 kb on + strand, within SGL_RS04260 at 505.809 kb on - strand, within SGL_RS04260 at 505.886 kb on - strand, within SGL_RS04260 at 506.093 kb on + strand at 506.223 kb on + strand at 506.311 kb on - strand at 506.410 kb on - strand at 506.456 kb on - strand, within SGL_RS04265 at 506.458 kb on + strand, within SGL_RS04265 at 506.499 kb on - strand, within SGL_RS04265 at 506.815 kb on + strand, within SGL_RS04265 at 506.896 kb on - strand, within SGL_RS04265 at 506.910 kb on + strand, within SGL_RS04265 at 507.136 kb on - strand, within SGL_RS04265
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 504,439 - SGL_RS04250 0.64 +1.0 504,530 - SGL_RS04250 0.76 +0.7 504,816 + SGL_RS04255 0.12 -1.7 504,875 + SGL_RS04255 0.23 +2.0 504,899 + SGL_RS04255 0.28 -0.3 504,921 - SGL_RS04255 0.32 -1.4 504,946 - SGL_RS04255 0.37 +1.1 504,990 - SGL_RS04255 0.46 -0.3 505,007 + SGL_RS04255 0.49 +0.2 505,058 - SGL_RS04255 0.59 +0.4 505,132 - SGL_RS04255 0.73 -1.0 505,202 + SGL_RS04255 0.87 -1.5 505,217 - -0.1 505,343 + -0.3 505,435 - -1.3 505,507 + SGL_RS04260 0.19 -0.5 505,507 + SGL_RS04260 0.19 -2.9 505,515 - SGL_RS04260 0.20 -1.5 505,571 - SGL_RS04260 0.27 -0.3 505,665 + SGL_RS04260 0.38 -4.0 505,665 + SGL_RS04260 0.38 -2.0 505,665 + SGL_RS04260 0.38 -1.7 505,680 + SGL_RS04260 0.40 -3.0 505,698 + SGL_RS04260 0.43 -2.0 505,782 - SGL_RS04260 0.53 -3.5 505,786 + SGL_RS04260 0.53 -0.9 505,809 - SGL_RS04260 0.56 -2.6 505,886 - SGL_RS04260 0.66 -1.2 506,093 + -2.9 506,223 + +2.0 506,311 - -0.2 506,410 - -1.1 506,456 - SGL_RS04265 0.11 -0.6 506,458 + SGL_RS04265 0.12 +0.5 506,499 - SGL_RS04265 0.14 -0.4 506,815 + SGL_RS04265 0.32 -0.4 506,896 - SGL_RS04265 0.36 -2.0 506,910 + SGL_RS04265 0.37 +0.1 507,136 - SGL_RS04265 0.50 +0.4
Or see this region's nucleotide sequence