Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS00210 and SGL_RS00215 overlap by 4 nucleotides SGL_RS00215 and SGL_RS00220 are separated by 4 nucleotides
SGL_RS00210: SGL_RS00210 - hypothetical protein, at 44,338 to 45,855
_RS00210
SGL_RS00215: SGL_RS00215 - glycosyltransferase family 4 protein, at 45,852 to 46,940
_RS00215
SGL_RS00220: SGL_RS00220 - oligosaccharide flippase family protein, at 46,945 to 48,288
_RS00220
Position (kb)
45
46
47 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 44.992 kb on - strand, within SGL_RS00210 at 45.310 kb on + strand, within SGL_RS00210 at 45.540 kb on + strand, within SGL_RS00210 at 45.915 kb on - strand at 45.944 kb on + strand at 45.974 kb on + strand, within SGL_RS00215 at 46.031 kb on - strand, within SGL_RS00215 at 46.076 kb on - strand, within SGL_RS00215 at 46.097 kb on + strand, within SGL_RS00215 at 46.145 kb on - strand, within SGL_RS00215 at 46.156 kb on + strand, within SGL_RS00215 at 46.164 kb on + strand, within SGL_RS00215 at 46.363 kb on - strand, within SGL_RS00215 at 46.414 kb on + strand, within SGL_RS00215 at 46.432 kb on + strand, within SGL_RS00215 at 46.443 kb on - strand, within SGL_RS00215 at 46.455 kb on - strand, within SGL_RS00215 at 46.518 kb on - strand, within SGL_RS00215 at 46.578 kb on + strand, within SGL_RS00215 at 46.578 kb on - strand, within SGL_RS00215 at 46.735 kb on - strand, within SGL_RS00215 at 46.899 kb on - strand at 46.917 kb on + strand at 46.925 kb on - strand at 47.089 kb on - strand, within SGL_RS00220 at 47.214 kb on + strand, within SGL_RS00220 at 47.268 kb on + strand, within SGL_RS00220 at 47.305 kb on + strand, within SGL_RS00220 at 47.366 kb on - strand, within SGL_RS00220 at 47.378 kb on + strand, within SGL_RS00220 at 47.378 kb on + strand, within SGL_RS00220 at 47.378 kb on + strand, within SGL_RS00220 at 47.439 kb on + strand, within SGL_RS00220 at 47.457 kb on - strand, within SGL_RS00220 at 47.479 kb on + strand, within SGL_RS00220 at 47.511 kb on - strand, within SGL_RS00220 at 47.518 kb on + strand, within SGL_RS00220 at 47.532 kb on + strand, within SGL_RS00220 at 47.532 kb on + strand, within SGL_RS00220 at 47.540 kb on - strand, within SGL_RS00220 at 47.554 kb on - strand, within SGL_RS00220 at 47.625 kb on - strand, within SGL_RS00220 at 47.817 kb on + strand, within SGL_RS00220 at 47.852 kb on + strand, within SGL_RS00220 at 47.905 kb on - strand, within SGL_RS00220
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 44,992 - SGL_RS00210 0.43 -4.9 45,310 + SGL_RS00210 0.64 -1.5 45,540 + SGL_RS00210 0.79 -4.9 45,915 - -0.5 45,944 + -3.7 45,974 + SGL_RS00215 0.11 -2.8 46,031 - SGL_RS00215 0.16 -3.7 46,076 - SGL_RS00215 0.21 -5.4 46,097 + SGL_RS00215 0.22 -5.0 46,145 - SGL_RS00215 0.27 -4.6 46,156 + SGL_RS00215 0.28 -3.1 46,164 + SGL_RS00215 0.29 -3.0 46,363 - SGL_RS00215 0.47 -3.8 46,414 + SGL_RS00215 0.52 -4.0 46,432 + SGL_RS00215 0.53 -4.3 46,443 - SGL_RS00215 0.54 -4.5 46,455 - SGL_RS00215 0.55 -2.8 46,518 - SGL_RS00215 0.61 -0.4 46,578 + SGL_RS00215 0.67 -3.7 46,578 - SGL_RS00215 0.67 -4.9 46,735 - SGL_RS00215 0.81 -6.1 46,899 - -4.8 46,917 + -1.8 46,925 - -4.7 47,089 - SGL_RS00220 0.11 -1.4 47,214 + SGL_RS00220 0.20 -1.5 47,268 + SGL_RS00220 0.24 -4.9 47,305 + SGL_RS00220 0.27 -4.3 47,366 - SGL_RS00220 0.31 -4.1 47,378 + SGL_RS00220 0.32 -5.0 47,378 + SGL_RS00220 0.32 -4.9 47,378 + SGL_RS00220 0.32 -6.5 47,439 + SGL_RS00220 0.37 -2.0 47,457 - SGL_RS00220 0.38 -0.8 47,479 + SGL_RS00220 0.40 -5.2 47,511 - SGL_RS00220 0.42 -6.0 47,518 + SGL_RS00220 0.43 -5.1 47,532 + SGL_RS00220 0.44 -2.6 47,532 + SGL_RS00220 0.44 -4.7 47,540 - SGL_RS00220 0.44 -4.9 47,554 - SGL_RS00220 0.45 -6.1 47,625 - SGL_RS00220 0.51 -1.3 47,817 + SGL_RS00220 0.65 -2.5 47,852 + SGL_RS00220 0.67 -5.5 47,905 - SGL_RS00220 0.71 -2.5
Or see this region's nucleotide sequence