Experiment: high light; bubbling
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS00205 and SGL_RS00210 are separated by 44 nucleotides SGL_RS00210 and SGL_RS00215 overlap by 4 nucleotides
SGL_RS00205: SGL_RS00205 - sulfotransferase, at 43,343 to 44,293
_RS00205
SGL_RS00210: SGL_RS00210 - hypothetical protein, at 44,338 to 45,855
_RS00210
SGL_RS00215: SGL_RS00215 - glycosyltransferase family 4 protein, at 45,852 to 46,940
_RS00215
Position (kb) 44
45
46 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 43.439 kb on + strand, within SGL_RS00205 at 43.668 kb on - strand, within SGL_RS00205 at 43.823 kb on + strand, within SGL_RS00205 at 43.857 kb on - strand, within SGL_RS00205 at 43.885 kb on - strand, within SGL_RS00205 at 43.885 kb on - strand, within SGL_RS00205 at 43.931 kb on - strand, within SGL_RS00205 at 43.968 kb on + strand, within SGL_RS00205 at 43.976 kb on + strand, within SGL_RS00205 at 44.070 kb on + strand, within SGL_RS00205 at 44.079 kb on - strand, within SGL_RS00205 at 44.103 kb on + strand, within SGL_RS00205 at 44.112 kb on - strand, within SGL_RS00205 at 44.131 kb on - strand, within SGL_RS00205 at 44.159 kb on - strand, within SGL_RS00205 at 44.182 kb on + strand, within SGL_RS00205 at 44.223 kb on - strand at 44.233 kb on - strand at 44.342 kb on - strand at 44.346 kb on + strand at 44.356 kb on + strand at 44.374 kb on + strand at 44.404 kb on + strand at 44.449 kb on - strand at 44.460 kb on + strand at 44.504 kb on + strand, within SGL_RS00210 at 44.509 kb on + strand, within SGL_RS00210 at 44.517 kb on - strand, within SGL_RS00210 at 44.525 kb on - strand, within SGL_RS00210 at 44.628 kb on + strand, within SGL_RS00210 at 44.669 kb on + strand, within SGL_RS00210 at 44.669 kb on + strand, within SGL_RS00210 at 44.722 kb on - strand, within SGL_RS00210 at 44.724 kb on + strand, within SGL_RS00210 at 44.730 kb on + strand, within SGL_RS00210 at 44.732 kb on - strand, within SGL_RS00210 at 44.754 kb on - strand, within SGL_RS00210 at 44.992 kb on - strand, within SGL_RS00210 at 45.310 kb on + strand, within SGL_RS00210 at 45.540 kb on + strand, within SGL_RS00210 at 45.915 kb on - strand at 45.944 kb on + strand at 45.974 kb on + strand, within SGL_RS00215 at 46.031 kb on - strand, within SGL_RS00215 at 46.076 kb on - strand, within SGL_RS00215 at 46.097 kb on + strand, within SGL_RS00215 at 46.145 kb on - strand, within SGL_RS00215 at 46.156 kb on + strand, within SGL_RS00215 at 46.164 kb on + strand, within SGL_RS00215 at 46.363 kb on - strand, within SGL_RS00215 at 46.414 kb on + strand, within SGL_RS00215 at 46.432 kb on + strand, within SGL_RS00215 at 46.443 kb on - strand, within SGL_RS00215 at 46.455 kb on - strand, within SGL_RS00215 at 46.518 kb on - strand, within SGL_RS00215 at 46.578 kb on + strand, within SGL_RS00215 at 46.578 kb on - strand, within SGL_RS00215 at 46.735 kb on - strand, within SGL_RS00215
Per-strain Table
Position Strand Gene LocusTag Fraction high light; bubbling remove 43,439 + SGL_RS00205 0.10 -0.1 43,668 - SGL_RS00205 0.34 -1.8 43,823 + SGL_RS00205 0.50 -2.9 43,857 - SGL_RS00205 0.54 -1.6 43,885 - SGL_RS00205 0.57 +0.6 43,885 - SGL_RS00205 0.57 -1.1 43,931 - SGL_RS00205 0.62 -2.3 43,968 + SGL_RS00205 0.66 -3.5 43,976 + SGL_RS00205 0.67 -1.8 44,070 + SGL_RS00205 0.76 -2.5 44,079 - SGL_RS00205 0.77 -2.2 44,103 + SGL_RS00205 0.80 -1.6 44,112 - SGL_RS00205 0.81 -3.0 44,131 - SGL_RS00205 0.83 -2.5 44,159 - SGL_RS00205 0.86 -0.8 44,182 + SGL_RS00205 0.88 -1.0 44,223 - -2.2 44,233 - -2.0 44,342 - -1.5 44,346 + -2.0 44,356 + -2.4 44,374 + -0.7 44,404 + -0.7 44,449 - -0.1 44,460 + -0.9 44,504 + SGL_RS00210 0.11 -1.3 44,509 + SGL_RS00210 0.11 -2.0 44,517 - SGL_RS00210 0.12 -2.2 44,525 - SGL_RS00210 0.12 -1.4 44,628 + SGL_RS00210 0.19 -2.2 44,669 + SGL_RS00210 0.22 -2.6 44,669 + SGL_RS00210 0.22 -4.0 44,722 - SGL_RS00210 0.25 -2.4 44,724 + SGL_RS00210 0.25 -4.9 44,730 + SGL_RS00210 0.26 -4.8 44,732 - SGL_RS00210 0.26 -2.6 44,754 - SGL_RS00210 0.27 -3.3 44,992 - SGL_RS00210 0.43 -4.9 45,310 + SGL_RS00210 0.64 -1.5 45,540 + SGL_RS00210 0.79 -4.9 45,915 - -0.5 45,944 + -3.7 45,974 + SGL_RS00215 0.11 -2.8 46,031 - SGL_RS00215 0.16 -3.7 46,076 - SGL_RS00215 0.21 -5.4 46,097 + SGL_RS00215 0.22 -5.0 46,145 - SGL_RS00215 0.27 -4.6 46,156 + SGL_RS00215 0.28 -3.1 46,164 + SGL_RS00215 0.29 -3.0 46,363 - SGL_RS00215 0.47 -3.8 46,414 + SGL_RS00215 0.52 -4.0 46,432 + SGL_RS00215 0.53 -4.3 46,443 - SGL_RS00215 0.54 -4.5 46,455 - SGL_RS00215 0.55 -2.8 46,518 - SGL_RS00215 0.61 -0.4 46,578 + SGL_RS00215 0.67 -3.7 46,578 - SGL_RS00215 0.67 -4.9 46,735 - SGL_RS00215 0.81 -6.1
Or see this region's nucleotide sequence