Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04547

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,759,103	-		MPMX20_04545	0.44	-0.7
4,759,187	+		MPMX20_04545	0.56	-0.4
4,759,187	+		MPMX20_04545	0.56	-0.1
4,759,187	+		MPMX20_04545	0.56	+2.7
4,759,187	+		MPMX20_04545	0.56	-0.6
4,759,187	+		MPMX20_04545	0.56	+0.6
4,759,195	-		MPMX20_04545	0.57	-1.4
4,759,195	-		MPMX20_04545	0.57	-1.4
4,759,222	+		MPMX20_04545	0.60	+0.8
4,759,225	-		MPMX20_04545	0.61	-1.7
4,759,230	-		MPMX20_04545	0.61	+0.7
4,759,309	+		MPMX20_04545	0.72	-1.7
4,759,370	+		MPMX20_04545	0.80	-1.9
4,759,532	+				+1.4
4,759,630	-		MPMX20_04546	0.27	+1.2
4,759,669	-		MPMX20_04546	0.36	+0.4
4,759,679	-		MPMX20_04546	0.38	+2.4
4,759,744	+		MPMX20_04546	0.54	-1.5
4,759,785	-		MPMX20_04546	0.64	-1.5
4,759,815	-		MPMX20_04546	0.71	-0.8
4,759,933	-				+0.4
4,759,935	+				-0.9
4,759,942	+				+0.4
4,759,987	-				-0.5
4,760,047	-				+0.6
4,760,047	-				-0.1
4,760,076	+				-0.3
4,760,131	+		MPMX20_04547	0.14	+1.7
4,760,143	+		MPMX20_04547	0.16	-0.2
4,760,227	-		MPMX20_04547	0.30	-1.9
4,760,228	-		MPMX20_04547	0.30	-0.2
4,760,270	+		MPMX20_04547	0.37	+0.3
4,760,275	+		MPMX20_04547	0.38	-1.1
4,760,278	-		MPMX20_04547	0.38	-0.6
4,760,278	-		MPMX20_04547	0.38	-1.2
4,760,283	-		MPMX20_04547	0.39	-0.1
4,760,283	-		MPMX20_04547	0.39	-2.0
4,760,283	-		MPMX20_04547	0.39	-0.9
4,760,334	-		MPMX20_04547	0.48	+0.7
4,760,369	+		MPMX20_04547	0.53	-0.6
4,760,387	+		MPMX20_04547	0.56	-1.6
4,760,395	-		MPMX20_04547	0.58	-0.3
4,760,395	-		MPMX20_04547	0.58	-0.6
4,760,395	-		MPMX20_04547	0.58	-1.0
4,760,427	+		MPMX20_04547	0.63	-1.7
4,760,440	+		MPMX20_04547	0.65	-2.5
4,760,466	-		MPMX20_04547	0.70	-3.1
4,760,545	+		MPMX20_04547	0.83	-1.6
4,760,545	+		MPMX20_04547	0.83	-0.6
4,760,545	+		MPMX20_04547	0.83	-0.6
4,760,553	-		MPMX20_04547	0.84	+0.4
4,760,712	+				-1.6
4,761,500	+				+0.4
4,761,630	+				+0.2
4,761,630	+				+1.2
4,761,630	+				+0.7