Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04524

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,732,070	-		MPMX20_04523	0.51	-0.3
4,732,075	-		MPMX20_04523	0.51	+1.1
4,732,189	+		MPMX20_04523	0.61	+0.3
4,732,224	+		MPMX20_04523	0.64	-1.5
4,732,232	-		MPMX20_04523	0.65	-0.5
4,732,251	-		MPMX20_04523	0.66	-1.3
4,732,298	-		MPMX20_04523	0.70	-1.6
4,732,377	+		MPMX20_04523	0.77	-3.1
4,732,482	-		MPMX20_04523	0.86	+3.1
4,732,504	+		MPMX20_04523	0.88	-1.9
4,732,509	+		MPMX20_04523	0.89	-0.1
4,732,509	+		MPMX20_04523	0.89	-0.3
4,732,509	+		MPMX20_04523	0.89	-1.0
4,732,509	+		MPMX20_04523	0.89	-3.0
4,732,517	-		MPMX20_04523	0.89	-1.7
4,732,589	-				-2.9
4,732,593	+				+0.5
4,732,612	+				+0.7
4,732,674	+				+0.1
4,732,680	+				-0.7
4,732,680	+				-1.5
4,732,680	+				-1.2
4,732,680	+				+0.9
4,732,682	-				-0.9
4,732,688	-				+1.1
4,732,688	-				-2.7
4,732,688	-				+1.3
4,732,688	-				-2.6
4,732,688	-				-0.3
4,732,688	-				-0.5
4,732,727	+				-1.6
4,732,727	+				-0.6
4,732,779	-				+0.7
4,732,835	-				-0.1
4,732,941	-				-2.6
4,732,941	-				-2.8
4,732,970	-				-0.1
4,733,077	+				-1.3
4,733,085	-				-2.7
4,733,152	+				-2.1
4,733,165	+				-1.8
4,733,168	-				-0.9
4,733,282	+		MPMX20_04524	0.14	-3.2
4,733,312	-		MPMX20_04524	0.15	+0.7
4,733,316	-		MPMX20_04524	0.15	-0.9
4,733,369	+		MPMX20_04524	0.17	-1.0
4,733,369	-		MPMX20_04524	0.17	-2.6
4,733,379	+		MPMX20_04524	0.18	-3.0
4,733,456	+		MPMX20_04524	0.21	-1.8
4,733,461	+		MPMX20_04524	0.21	-0.0
4,733,461	+		MPMX20_04524	0.21	-2.9
4,733,461	+		MPMX20_04524	0.21	-2.8
4,733,469	-		MPMX20_04524	0.21	-3.0
4,733,493	+		MPMX20_04524	0.22	+0.7
4,733,493	+		MPMX20_04524	0.22	+1.8
4,733,512	+		MPMX20_04524	0.23	-1.1
4,733,523	+		MPMX20_04524	0.23	-1.7
4,733,524	-		MPMX20_04524	0.23	+0.4
4,733,548	+		MPMX20_04524	0.24	-1.9
4,733,548	+		MPMX20_04524	0.24	-2.4
4,733,590	+		MPMX20_04524	0.26	-1.8
4,733,770	-		MPMX20_04524	0.32	+1.1
4,733,777	-		MPMX20_04524	0.33	-1.6
4,733,785	+		MPMX20_04524	0.33	+1.1
4,733,796	+		MPMX20_04524	0.33	-0.8
4,733,796	+		MPMX20_04524	0.33	-0.6
4,733,796	+		MPMX20_04524	0.33	+2.5
4,733,796	+		MPMX20_04524	0.33	+0.5
4,733,796	+		MPMX20_04524	0.33	+0.4
4,733,804	-		MPMX20_04524	0.34	-2.1
4,733,804	-		MPMX20_04524	0.34	-2.5
4,733,804	-		MPMX20_04524	0.34	-1.7
4,733,804	-		MPMX20_04524	0.34	-0.4
4,733,806	-		MPMX20_04524	0.34	+0.1
4,733,828	-		MPMX20_04524	0.35	-0.7
4,733,864	-		MPMX20_04524	0.36	+0.1
4,733,883	-		MPMX20_04524	0.37	-3.0
4,733,890	+		MPMX20_04524	0.37	-3.1
4,733,970	-		MPMX20_04524	0.40	-1.5
4,733,983	-		MPMX20_04524	0.40	+1.9
4,734,037	+		MPMX20_04524	0.42	-0.6
4,734,037	+		MPMX20_04524	0.42	-2.2
4,734,045	-		MPMX20_04524	0.43	-0.3
4,734,229	+		MPMX20_04524	0.50	-2.0
4,734,248	-		MPMX20_04524	0.50	-1.1
4,734,254	+		MPMX20_04524	0.51	+0.7
4,734,269	+		MPMX20_04524	0.51	+3.4
4,734,277	-		MPMX20_04524	0.52	+0.1
4,734,279	+		MPMX20_04524	0.52	+0.3
4,734,279	+		MPMX20_04524	0.52	-1.2
4,734,279	-		MPMX20_04524	0.52	-0.3
4,734,403	-		MPMX20_04524	0.56	-0.1
4,734,445	-		MPMX20_04524	0.58	+1.1
4,734,480	-		MPMX20_04524	0.59	-1.1
4,734,480	-		MPMX20_04524	0.59	-0.7
4,734,495	+		MPMX20_04524	0.60	-2.3
4,734,495	+		MPMX20_04524	0.60	+0.5
4,734,503	-		MPMX20_04524	0.60	+1.5
4,734,640	+		MPMX20_04524	0.65	+0.5
4,734,707	-		MPMX20_04524	0.68	+0.1
4,734,806	+		MPMX20_04524	0.71	-0.9
4,734,806	+		MPMX20_04524	0.71	+0.1
4,734,806	+		MPMX20_04524	0.71	-0.1
4,734,806	+		MPMX20_04524	0.71	-1.2
4,734,814	-		MPMX20_04524	0.72	-1.7
4,734,814	-		MPMX20_04524	0.72	-0.9
4,734,814	-		MPMX20_04524	0.72	-2.3
4,734,846	+		MPMX20_04524	0.73	-2.1
4,734,870	-		MPMX20_04524	0.74	-2.3
4,734,961	+		MPMX20_04524	0.77	-1.4
4,734,980	-		MPMX20_04524	0.78	-1.8
4,735,018	-		MPMX20_04524	0.79	-2.8
4,735,039	-		MPMX20_04524	0.80	-1.3
4,735,073	+		MPMX20_04524	0.82	-1.8
4,735,073	+		MPMX20_04524	0.82	-1.5
4,735,090	-		MPMX20_04524	0.82	-0.9
4,735,204	-		MPMX20_04524	0.87	-0.1
4,735,249	+		MPMX20_04524	0.88	-1.1
4,735,293	+		MPMX20_04524	0.90	-1.1
4,735,293	+		MPMX20_04524	0.90	+1.7
4,735,293	+		MPMX20_04524	0.90	-2.0
4,735,298	+				-1.6
4,735,299	-				+0.8
4,735,301	-				-2.4
4,735,392	+				-3.6
4,735,392	+				-2.1
4,735,417	-				-2.1
4,735,463	-				-1.3
4,735,546	+				-0.3
4,735,554	-				+0.4
4,735,554	-				-1.9
4,735,554	-				-0.6
4,735,556	+				-2.4
4,735,556	+				+1.7
4,735,556	+				-0.7
4,735,668	-				+0.9
4,735,668	-				+0.2
4,735,671	+				-0.5
4,735,679	-				+1.0
4,735,712	-		MPMX20_04525	0.11	-2.9
4,735,725	-		MPMX20_04525	0.13	+0.9
4,735,729	+		MPMX20_04525	0.14	+0.4
4,735,835	+		MPMX20_04525	0.27	-0.4
4,735,925	-		MPMX20_04525	0.39	+1.1
4,736,007	+		MPMX20_04525	0.50	-2.9
4,736,059	+		MPMX20_04525	0.57	-3.5
4,736,059	+		MPMX20_04525	0.57	-0.3
4,736,059	+		MPMX20_04525	0.57	-0.9
4,736,067	-		MPMX20_04525	0.58	+0.3
4,736,067	-		MPMX20_04525	0.58	-1.1
4,736,067	-		MPMX20_04525	0.58	-2.3
4,736,067	-		MPMX20_04525	0.58	-0.2
4,736,067	-		MPMX20_04525	0.58	-1.6
4,736,097	+		MPMX20_04525	0.62	+1.1
4,736,105	-		MPMX20_04525	0.63	+2.7
4,736,110	-		MPMX20_04525	0.63	+0.2
4,736,182	+		MPMX20_04525	0.73	-2.4
4,736,223	-		MPMX20_04525	0.78	-0.1
4,736,234	-		MPMX20_04525	0.80	+1.4
4,736,477	+				+1.3
4,736,477	+				+0.7
4,736,480	-				-0.6