Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04464

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,667,963	+		MPMX20_04463	0.64	+1.7
4,668,018	-		MPMX20_04463	0.66	+2.7
4,668,026	-		MPMX20_04463	0.66	+0.1
4,668,053	+		MPMX20_04463	0.68	+0.1
4,668,120	+		MPMX20_04463	0.71	-0.8
4,668,181	+		MPMX20_04463	0.74	+0.4
4,668,199	-		MPMX20_04463	0.74	-1.4
4,668,199	-		MPMX20_04463	0.74	+1.7
4,668,199	-		MPMX20_04463	0.74	-1.2
4,668,214	+		MPMX20_04463	0.75	+1.7
4,668,222	-		MPMX20_04463	0.75	+1.1
4,668,400	-		MPMX20_04463	0.84	+0.7
4,668,400	-		MPMX20_04463	0.84	-1.6
4,668,599	+				-2.2
4,668,668	-				-0.8
4,668,736	+				-0.8
4,668,879	+				+0.6
4,668,910	-		MPMX20_04464	0.11	-2.5
4,668,989	-		MPMX20_04464	0.22	-0.5
4,669,122	+		MPMX20_04464	0.40	+1.1
4,669,130	-		MPMX20_04464	0.42	-0.8
4,669,251	+		MPMX20_04464	0.58	-0.9
4,669,251	+		MPMX20_04464	0.58	-0.1
4,669,259	-		MPMX20_04464	0.60	+1.1
4,669,259	-		MPMX20_04464	0.60	+0.7
4,669,259	-		MPMX20_04464	0.60	+0.2
4,669,284	+		MPMX20_04464	0.63	+0.7
4,669,324	-		MPMX20_04464	0.69	+3.1
4,669,356	-		MPMX20_04464	0.73	+1.3
4,669,369	+		MPMX20_04464	0.75	+2.0
4,669,408	+		MPMX20_04464	0.80	-0.8
4,669,439	-		MPMX20_04464	0.85	+0.4
4,669,457	+		MPMX20_04464	0.87	+2.3
4,669,470	-		MPMX20_04464	0.89	-0.4
4,669,508	-				-2.0
4,669,508	-				+1.4
4,669,508	-				+0.3
4,669,520	-				+2.9
4,669,534	-				-0.5
4,669,618	+				-1.0
4,669,618	+				+0.4
4,669,626	-				-1.5
4,669,650	+		MPMX20_04465	0.11	-0.9
4,669,658	-		MPMX20_04465	0.12	-1.5
4,669,743	+		MPMX20_04465	0.22	+0.1
4,669,769	-		MPMX20_04465	0.24	-2.1
4,669,769	-		MPMX20_04465	0.24	-1.1
4,669,774	+		MPMX20_04465	0.25	-0.5
4,669,787	-		MPMX20_04465	0.26	+1.7
4,669,851	-		MPMX20_04465	0.34	+0.1
4,669,862	+		MPMX20_04465	0.35	-1.9
4,669,862	+		MPMX20_04465	0.35	+0.1
4,669,867	+		MPMX20_04465	0.35	+1.7
4,669,870	-		MPMX20_04465	0.36	+0.7
4,669,875	-		MPMX20_04465	0.36	-0.1
4,669,927	+		MPMX20_04465	0.42	+2.7
4,669,999	-		MPMX20_04465	0.50	+1.1
4,669,999	-		MPMX20_04465	0.50	+0.4
4,669,999	-		MPMX20_04465	0.50	-0.9
4,670,022	-		MPMX20_04465	0.52	+1.1
4,670,022	-		MPMX20_04465	0.52	-0.1
4,670,040	+		MPMX20_04465	0.54	+1.1
4,670,136	-		MPMX20_04465	0.65	+1.7
4,670,169	-		MPMX20_04465	0.69	-1.7
4,670,180	-		MPMX20_04465	0.70	-0.6
4,670,197	+		MPMX20_04465	0.72	-0.1
4,670,240	-		MPMX20_04465	0.77	-0.1
4,670,371	+				+2.7
4,670,385	-				-0.1
4,670,404	-				-0.1
4,670,404	-				-0.1
4,670,404	-				+1.7
4,670,481	+				+0.4
4,670,493	-				-0.6
4,670,518	-		MPMX20_04466	0.10	-2.9
4,670,535	-		MPMX20_04466	0.12	-1.5