Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04412

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,604,751	-				+1.1
4,604,753	+				-1.2
4,604,761	-				-1.3
4,604,761	-				+0.2
4,604,761	-				-1.9
4,604,883	-		MPMX20_04411	0.12	-1.2
4,604,989	-		MPMX20_04411	0.24	+0.0
4,605,033	-		MPMX20_04411	0.28	-2.8
4,605,107	+		MPMX20_04411	0.36	-0.4
4,605,115	+		MPMX20_04411	0.37	+1.6
4,605,141	-		MPMX20_04411	0.40	+0.0
4,605,146	-		MPMX20_04411	0.41	+1.6
4,605,172	+		MPMX20_04411	0.43	+6.5
4,605,172	+		MPMX20_04411	0.43	-0.7
4,605,172	+		MPMX20_04411	0.43	+1.9
4,605,172	+		MPMX20_04411	0.43	+0.8
4,605,172	+		MPMX20_04411	0.43	-0.4
4,605,172	+		MPMX20_04411	0.43	+0.0
4,605,172	+		MPMX20_04411	0.43	+0.2
4,605,180	-		MPMX20_04411	0.44	+0.3
4,605,180	-		MPMX20_04411	0.44	+1.0
4,605,180	-		MPMX20_04411	0.44	+1.0
4,605,185	-		MPMX20_04411	0.45	-0.8
4,605,218	+		MPMX20_04411	0.48	-1.8
4,605,228	+		MPMX20_04411	0.49	+0.2
4,605,277	-		MPMX20_04411	0.55	-1.8
4,605,284	+		MPMX20_04411	0.55	-0.3
4,605,284	+		MPMX20_04411	0.55	+0.1
4,605,284	+		MPMX20_04411	0.55	+0.6
4,605,292	-		MPMX20_04411	0.56	-0.7
4,605,295	+		MPMX20_04411	0.57	+1.1
4,605,295	+		MPMX20_04411	0.57	-2.4
4,605,295	+		MPMX20_04411	0.57	-1.5
4,605,295	+		MPMX20_04411	0.57	+1.9
4,605,295	+		MPMX20_04411	0.57	+0.9
4,605,303	-		MPMX20_04411	0.57	-1.0
4,605,303	-		MPMX20_04411	0.57	+3.6
4,605,303	-		MPMX20_04411	0.57	+0.3
4,605,323	+		MPMX20_04411	0.60	+1.4
4,605,404	+		MPMX20_04411	0.68	-1.1
4,605,444	-		MPMX20_04411	0.73	-0.4
4,605,457	+		MPMX20_04411	0.74	-0.7
4,605,568	+		MPMX20_04411	0.86	-2.4
4,605,795	-				-1.8
4,605,883	-				+0.5
4,605,923	+		MPMX20_04412	0.12	+0.1
4,605,965	-		MPMX20_04412	0.15	+2.1
4,605,965	-		MPMX20_04412	0.15	+0.1
4,605,978	+		MPMX20_04412	0.16	-1.4
4,605,986	-		MPMX20_04412	0.16	+1.3
4,606,015	+		MPMX20_04412	0.18	+1.6
4,606,023	-		MPMX20_04412	0.19	+3.6
4,606,081	-		MPMX20_04412	0.23	+0.1
4,606,105	-		MPMX20_04412	0.24	+1.2
4,606,118	+		MPMX20_04412	0.25	-0.3
4,606,144	-		MPMX20_04412	0.27	+2.6
4,606,246	-		MPMX20_04412	0.34	-1.7
4,606,246	-		MPMX20_04412	0.34	+0.3
4,606,256	-		MPMX20_04412	0.34	-0.8
4,606,288	+		MPMX20_04412	0.37	+0.4
4,606,313	+		MPMX20_04412	0.38	+3.0
4,606,313	+		MPMX20_04412	0.38	+0.6
4,606,313	+		MPMX20_04412	0.38	+1.1
4,606,321	-		MPMX20_04412	0.39	+2.6
4,606,391	+		MPMX20_04412	0.43	-0.2
4,606,391	-		MPMX20_04412	0.43	-1.5
4,606,399	-		MPMX20_04412	0.44	+1.4
4,606,460	-		MPMX20_04412	0.48	+0.2
4,606,526	+		MPMX20_04412	0.52	-0.2
4,606,531	+		MPMX20_04412	0.53	+1.5
4,606,545	+		MPMX20_04412	0.54	+3.0
4,606,553	-		MPMX20_04412	0.54	+1.1
4,606,553	-		MPMX20_04412	0.54	+0.5
4,606,560	-		MPMX20_04412	0.55	+2.9
4,606,560	-		MPMX20_04412	0.55	-2.1
4,606,595	-		MPMX20_04412	0.57	+1.0
4,606,662	+		MPMX20_04412	0.62	+1.2
4,606,667	+		MPMX20_04412	0.62	+2.0
4,606,677	+		MPMX20_04412	0.63	-0.2
4,606,685	-		MPMX20_04412	0.63	+0.6
4,606,685	-		MPMX20_04412	0.63	-1.7
4,606,685	-		MPMX20_04412	0.63	-2.6
4,606,727	+		MPMX20_04412	0.66	+2.1
4,606,748	+		MPMX20_04412	0.67	-1.2
4,606,756	-		MPMX20_04412	0.68	+1.4
4,606,826	+		MPMX20_04412	0.73	+2.4
4,606,834	-		MPMX20_04412	0.73	-0.9
4,606,878	+		MPMX20_04412	0.76	+0.8
4,606,891	-		MPMX20_04412	0.77	+0.6
4,606,947	+		MPMX20_04412	0.81	-0.2
4,606,953	-		MPMX20_04412	0.81	-0.2
4,606,953	-		MPMX20_04412	0.81	+1.9
4,606,953	-		MPMX20_04412	0.81	-0.1
4,606,953	-		MPMX20_04412	0.81	+0.2
4,606,953	-		MPMX20_04412	0.81	-0.8
4,606,953	-		MPMX20_04412	0.81	+0.3
4,606,953	-		MPMX20_04412	0.81	-1.2
4,606,964	-		MPMX20_04412	0.82	-0.4
4,606,972	-		MPMX20_04412	0.82	-1.1
4,607,059	+		MPMX20_04412	0.88	+0.8
4,607,290	+				+1.4
4,607,334	+				-3.0
4,607,396	-				-0.6
4,607,413	-				-0.5
4,607,489	-				+4.5
4,607,591	+		MPMX20_04413	0.10	-1.5
4,607,599	-		MPMX20_04413	0.11	+2.9
4,607,733	-		MPMX20_04413	0.21	+2.1
4,607,733	-		MPMX20_04413	0.21	+1.2
4,607,753	-		MPMX20_04413	0.23	+1.4
4,607,763	-		MPMX20_04413	0.23	+2.2
4,607,807	-		MPMX20_04413	0.27	-0.9
4,607,853	-		MPMX20_04413	0.30	+2.7
4,607,860	-		MPMX20_04413	0.31	+5.2
4,607,860	-		MPMX20_04413	0.31	+1.9
4,607,874	+		MPMX20_04413	0.32	+1.5
4,607,935	-		MPMX20_04413	0.37	+2.0
4,607,979	-		MPMX20_04413	0.40	+6.5
4,608,013	-		MPMX20_04413	0.43	+6.2
4,608,027	+		MPMX20_04413	0.44	+4.0
4,608,035	-		MPMX20_04413	0.45	+1.7
4,608,063	-		MPMX20_04413	0.47	+1.7
4,608,084	+		MPMX20_04413	0.48	+2.5
4,608,092	+		MPMX20_04413	0.49	+2.0
4,608,097	+		MPMX20_04413	0.49	+0.7
4,608,097	+		MPMX20_04413	0.49	+1.6
4,608,110	-		MPMX20_04413	0.50	+3.8
4,608,136	-		MPMX20_04413	0.52	-1.1
4,608,149	+		MPMX20_04413	0.53	-0.0
4,608,152	-		MPMX20_04413	0.54	+2.8
4,608,200	-		MPMX20_04413	0.57	+1.9
4,608,200	-		MPMX20_04413	0.57	-1.2
4,608,209	+		MPMX20_04413	0.58	+2.1