Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04310

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,498,989	-		MPMX20_04309	0.40	+0.7
4,499,005	+		MPMX20_04309	0.41	-0.1
4,499,061	-		MPMX20_04309	0.45	+0.7
4,499,113	+		MPMX20_04309	0.49	-1.5
4,499,119	-		MPMX20_04309	0.49	-0.5
4,499,119	-		MPMX20_04309	0.49	-1.5
4,499,171	+		MPMX20_04309	0.52	-0.7
4,499,201	+		MPMX20_04309	0.54	-0.9
4,499,201	+		MPMX20_04309	0.54	-0.5
4,499,201	+		MPMX20_04309	0.54	-0.8
4,499,209	-		MPMX20_04309	0.55	-0.5
4,499,209	-		MPMX20_04309	0.55	-0.1
4,499,246	-		MPMX20_04309	0.57	-0.9
4,499,314	-		MPMX20_04309	0.62	+0.7
4,499,317	+		MPMX20_04309	0.62	+0.6
4,499,407	+		MPMX20_04309	0.68	-0.5
4,499,449	-		MPMX20_04309	0.71	-1.5
4,499,452	+		MPMX20_04309	0.71	-0.1
4,499,460	-		MPMX20_04309	0.72	+0.3
4,499,518	+		MPMX20_04309	0.75	-2.0
4,499,527	-		MPMX20_04309	0.76	+0.3
4,499,527	-		MPMX20_04309	0.76	+1.1
4,499,668	-		MPMX20_04309	0.85	-1.3
4,499,717	+		MPMX20_04309	0.89	+1.1
4,499,737	+		MPMX20_04309	0.90	-0.9
4,499,873	+				+1.7
4,499,916	+				+0.8
4,499,929	-				-1.5
4,499,938	+				-3.3
4,500,080	-				-2.0
4,500,119	-				-2.0
4,500,128	-				+0.0
4,500,176	+				-2.4
4,500,209	+				+1.7
4,500,219	+				-0.9
4,500,263	-		MPMX20_04310	0.12	+1.1
4,500,299	+		MPMX20_04310	0.13	-2.1
4,500,329	-		MPMX20_04310	0.14	-1.2
4,500,338	-		MPMX20_04310	0.15	+0.3
4,500,365	+		MPMX20_04310	0.16	-0.8
4,500,373	-		MPMX20_04310	0.16	-2.0
4,500,390	+		MPMX20_04310	0.17	-0.1
4,500,462	+		MPMX20_04310	0.20	+0.0
4,500,486	+		MPMX20_04310	0.21	-1.5
4,500,645	-		MPMX20_04310	0.27	+0.1
4,500,712	-		MPMX20_04310	0.30	-0.1
4,500,712	-		MPMX20_04310	0.30	-1.7
4,500,721	-		MPMX20_04310	0.30	-1.6
4,500,721	-		MPMX20_04310	0.30	-1.0
4,500,828	+		MPMX20_04310	0.35	+1.1
4,500,881	+		MPMX20_04310	0.37	+0.3
4,500,881	+		MPMX20_04310	0.37	-3.0
4,500,889	-		MPMX20_04310	0.37	+0.1
4,500,920	-		MPMX20_04310	0.39	-0.1
4,500,920	-		MPMX20_04310	0.39	-1.9
4,500,920	-		MPMX20_04310	0.39	-3.2
4,500,932	+		MPMX20_04310	0.39	+0.5
4,501,025	-		MPMX20_04310	0.43	-0.5
4,501,052	+		MPMX20_04310	0.44	+2.3
4,501,095	+		MPMX20_04310	0.46	-1.8
4,501,143	+		MPMX20_04310	0.48	-0.0
4,501,201	+		MPMX20_04310	0.50	-0.7
4,501,209	-		MPMX20_04310	0.50	-1.1
4,501,278	-		MPMX20_04310	0.53	+1.5
4,501,344	+		MPMX20_04310	0.56	-2.8
4,501,352	-		MPMX20_04310	0.56	-1.5
4,501,455	+		MPMX20_04310	0.60	-0.3
4,501,462	-		MPMX20_04310	0.61	-2.1
4,501,526	+		MPMX20_04310	0.63	-1.6
4,501,528	+		MPMX20_04310	0.63	-1.7
4,501,537	+		MPMX20_04310	0.64	-1.1
4,501,545	-		MPMX20_04310	0.64	+0.3
4,501,559	+		MPMX20_04310	0.65	-0.7
4,501,608	+		MPMX20_04310	0.67	+0.7
4,501,616	-		MPMX20_04310	0.67	+1.7
4,501,644	+		MPMX20_04310	0.68	-0.7
4,501,711	+		MPMX20_04310	0.71	-1.7
4,501,714	-		MPMX20_04310	0.71	-0.5
4,501,731	-		MPMX20_04310	0.72	-1.0
4,501,742	-		MPMX20_04310	0.72	-1.5
4,501,811	-		MPMX20_04310	0.75	-0.3
4,501,811	-		MPMX20_04310	0.75	-2.6
4,501,908	-		MPMX20_04310	0.79	+0.3
4,501,910	-		MPMX20_04310	0.79	-0.1
4,501,967	-		MPMX20_04310	0.81	+1.0
4,502,059	+		MPMX20_04310	0.85	+0.7
4,502,062	-		MPMX20_04310	0.85	-1.3
4,502,064	+		MPMX20_04310	0.85	-1.4
4,502,101	+		MPMX20_04310	0.87	-0.8
4,502,126	+		MPMX20_04310	0.88	-2.4
4,502,170	-		MPMX20_04310	0.90	-1.4
4,502,170	-		MPMX20_04310	0.90	-0.5
4,502,170	-		MPMX20_04310	0.90	-0.2
4,502,204	+				-0.5
4,502,261	-				-0.8
4,502,294	+				-0.3
4,502,360	-				-0.1
4,502,379	+				-3.0
4,502,476	-				-1.7
4,502,602	-		MPMX20_04311	0.11	-0.3
4,502,649	-		MPMX20_04311	0.14	-2.5
4,502,674	-		MPMX20_04311	0.16	+0.3
4,502,674	-		MPMX20_04311	0.16	+1.1
4,502,728	-		MPMX20_04311	0.20	+0.5
4,502,730	+		MPMX20_04311	0.20	-3.1
4,502,780	-		MPMX20_04311	0.24	-0.2
4,502,780	-		MPMX20_04311	0.24	-0.9
4,502,805	-		MPMX20_04311	0.25	-1.0
4,502,828	-		MPMX20_04311	0.27	+0.3
4,502,885	-		MPMX20_04311	0.31	+0.7
4,502,899	-		MPMX20_04311	0.32	-0.9
4,502,929	+		MPMX20_04311	0.34	-0.1
4,503,015	+		MPMX20_04311	0.40	-2.4
4,503,015	+		MPMX20_04311	0.40	-2.5
4,503,023	-		MPMX20_04311	0.40	-1.9
4,503,023	-		MPMX20_04311	0.40	-0.7
4,503,149	+		MPMX20_04311	0.49	-1.0
4,503,160	+		MPMX20_04311	0.50	-3.6
4,503,244	-		MPMX20_04311	0.56	-1.6
4,503,261	-		MPMX20_04311	0.57	-0.8
4,503,263	+		MPMX20_04311	0.57	+1.5
4,503,263	+		MPMX20_04311	0.57	-0.2
4,503,306	+		MPMX20_04311	0.60	-0.9
4,503,399	-		MPMX20_04311	0.67	+0.1