Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04141

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,340,814	+		MPMX20_04140	0.38	-1.4
4,340,857	+		MPMX20_04140	0.42	+1.7
4,341,110	+		MPMX20_04140	0.69	+0.4
4,341,122	+		MPMX20_04140	0.70	-1.9
4,341,122	+		MPMX20_04140	0.70	+1.1
4,341,130	-		MPMX20_04140	0.71	-1.6
4,341,132	+		MPMX20_04140	0.71	-1.1
4,341,132	+		MPMX20_04140	0.71	-0.4
4,341,132	+		MPMX20_04140	0.71	-1.0
4,341,132	+		MPMX20_04140	0.71	+0.4
4,341,140	-		MPMX20_04140	0.72	-2.0
4,341,140	-		MPMX20_04140	0.72	-2.8
4,341,140	-		MPMX20_04140	0.72	-0.3
4,341,140	-		MPMX20_04140	0.72	-2.3
4,341,150	-		MPMX20_04140	0.73	-2.6
4,341,175	+		MPMX20_04140	0.76	-1.2
4,341,183	-		MPMX20_04140	0.77	-0.1
4,341,194	-		MPMX20_04140	0.78	-0.4
4,341,204	-		MPMX20_04140	0.79	-0.6
4,341,204	-		MPMX20_04140	0.79	-1.3
4,341,256	-		MPMX20_04140	0.85	-0.7
4,341,264	+		MPMX20_04140	0.86	+0.1
4,341,276	+		MPMX20_04140	0.87	-2.0
4,341,276	+		MPMX20_04140	0.87	-0.9
4,341,276	+		MPMX20_04140	0.87	+0.7
4,341,276	+		MPMX20_04140	0.87	-2.8
4,341,278	+		MPMX20_04140	0.87	-2.4
4,341,284	-		MPMX20_04140	0.88	-0.3
4,341,284	-		MPMX20_04140	0.88	-0.4
4,341,284	-		MPMX20_04140	0.88	-1.3
4,341,294	-		MPMX20_04140	0.89	-2.0
4,341,296	+		MPMX20_04140	0.89	-2.7
4,341,312	+				-2.1
4,341,320	-				-0.4
4,341,327	-				-1.3
4,341,363	-				+0.7
4,341,367	+				-0.7
4,341,368	-				-2.7
4,341,375	-				-0.1
4,341,377	+				-1.6
4,341,377	+				-2.3
4,341,377	+				-1.2
4,341,385	-				-1.7
4,341,387	-				-2.8
4,341,432	+				-1.4
4,341,448	-				+0.4
4,341,532	-				+0.4
4,341,532	-				-1.8
4,341,532	-				-0.6
4,341,532	-				+0.2
4,341,532	-				-1.6
4,341,532	-				-3.2
4,341,535	+				-0.8
4,341,580	-				-2.2
4,341,597	-				+1.7
4,341,625	+				-3.5
4,341,645	+				-2.5
4,341,649	+				-1.1
4,341,855	-		MPMX20_04141	0.12	-2.5
4,341,884	+		MPMX20_04141	0.18	-1.6
4,341,899	-		MPMX20_04141	0.22	-2.4
4,341,913	-		MPMX20_04141	0.25	-1.3
4,341,970	-		MPMX20_04141	0.37	-2.0
4,342,005	+		MPMX20_04141	0.44	-1.4
4,342,029	+		MPMX20_04141	0.49	-1.8
4,342,029	+		MPMX20_04141	0.49	-1.4
4,342,082	+		MPMX20_04141	0.61	-1.3
4,342,090	-		MPMX20_04141	0.62	-1.0
4,342,107	+		MPMX20_04141	0.66	-0.7
4,342,141	+		MPMX20_04141	0.73	-0.6
4,342,141	+		MPMX20_04141	0.73	-1.6
4,342,147	+		MPMX20_04141	0.74	-0.8
4,342,147	+		MPMX20_04141	0.74	-2.5
4,342,147	+		MPMX20_04141	0.74	-2.1
4,342,147	+		MPMX20_04141	0.74	-1.8
4,342,155	-		MPMX20_04141	0.76	-1.9
4,342,155	-		MPMX20_04141	0.76	-1.4
4,342,246	-				-0.1
4,342,264	+				-0.1
4,342,308	-				-3.2
4,342,327	+				-1.2
4,342,335	-				+0.2
4,342,335	-				-0.1
4,342,335	-				+0.2
4,342,335	-				+0.1
4,342,466	-				-0.3
4,342,642	-				-2.3
4,342,690	-		MPMX20_04142	0.17	-2.3
4,342,746	-		MPMX20_04142	0.38	+0.4
4,342,777	+		MPMX20_04142	0.50	-1.4
4,342,827	+		MPMX20_04142	0.69	+1.5
4,342,835	-		MPMX20_04142	0.72	-1.7
4,342,836	-		MPMX20_04142	0.72	-2.0
4,342,863	+		MPMX20_04142	0.83	+1.0
4,342,863	-		MPMX20_04142	0.83	-0.8
4,342,871	-		MPMX20_04142	0.86	+0.8
4,342,875	+		MPMX20_04142	0.87	+0.3
4,342,875	+		MPMX20_04142	0.87	-2.7
4,342,878	-		MPMX20_04142	0.88	-1.1
4,342,878	-		MPMX20_04142	0.88	-0.5
4,342,897	-				-0.7
4,342,899	-				+0.4
4,342,941	-				+6.5
4,342,969	+				+1.1
4,342,969	+				+0.6
4,343,083	+		MPMX20_04143	0.24	-2.9
4,343,174	-		MPMX20_04143	0.58	+0.9
4,343,192	+		MPMX20_04143	0.65	+1.1
4,343,230	+		MPMX20_04143	0.79	-1.3
4,343,240	+		MPMX20_04143	0.83	+1.3
4,343,248	-		MPMX20_04143	0.86	+1.7
4,343,252	+		MPMX20_04143	0.87	-0.0
4,343,255	-		MPMX20_04143	0.88	-0.3
4,343,259	-				-1.2