Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04138

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,336,866	-		MPMX20_04136	0.80	-1.5
4,336,884	+		MPMX20_04136	0.82	-1.7
4,336,921	+		MPMX20_04136	0.85	-0.4
4,336,921	+		MPMX20_04136	0.85	-0.7
4,336,926	+		MPMX20_04136	0.85	-1.6
4,336,929	-		MPMX20_04136	0.86	-2.0
4,336,929	-		MPMX20_04136	0.86	-1.2
4,336,929	-		MPMX20_04136	0.86	+1.2
4,336,948	+		MPMX20_04136	0.87	-2.8
4,337,023	-				-1.0
4,337,036	+				+1.3
4,337,042	-				-2.8
4,337,044	-				-2.5
4,337,046	+				-0.1
4,337,046	+				-1.8
4,337,054	-				-0.1
4,337,125	-				+0.1
4,337,154	+				-0.6
4,337,154	+				+0.2
4,337,154	+				+1.6
4,337,154	+				+0.5
4,337,154	+				+5.8
4,337,154	+				+1.2
4,337,162	-				-2.2
4,337,162	-				+1.7
4,337,162	-				+0.7
4,337,162	-				+0.7
4,337,177	-				-1.8
4,337,183	+				-2.5
4,337,188	-				-1.0
4,337,229	+				+0.7
4,337,229	+				-1.8
4,337,229	+				+0.7
4,337,229	+				+1.2
4,337,229	+				-0.7
4,337,229	+				-0.3
4,337,229	+				+0.0
4,337,229	+				-0.2
4,337,229	+				+1.2
4,337,229	+				+1.5
4,337,229	+				+0.7
4,337,229	+				-2.3
4,337,229	+				-1.8
4,337,229	+				+0.2
4,337,237	-				-3.1
4,337,237	-				-1.8
4,337,237	-				-1.1
4,337,237	-				-1.8
4,337,237	-				-0.6
4,337,240	+				+2.1
4,337,249	-				-1.0
4,337,256	-				-1.2
4,337,258	+				+1.1
4,337,258	-				-1.3
4,337,258	-				+0.7
4,337,266	-				+0.4
4,337,285	+				-2.3
4,337,285	-				+0.2
4,337,293	-				-1.8
4,337,345	-		MPMX20_04137	0.16	-1.1
4,337,380	+		MPMX20_04137	0.25	-0.4
4,337,380	+		MPMX20_04137	0.25	-0.8
4,337,400	+		MPMX20_04137	0.30	-0.7
4,337,408	-		MPMX20_04137	0.32	-1.1
4,337,426	+		MPMX20_04137	0.36	-0.4
4,337,431	+		MPMX20_04137	0.38	-0.8
4,337,444	+		MPMX20_04137	0.41	+0.4
4,337,497	-		MPMX20_04137	0.54	+0.9
4,337,611	+		MPMX20_04137	0.83	+1.2
4,337,611	+		MPMX20_04137	0.83	-1.0
4,337,619	-		MPMX20_04137	0.85	-3.2
4,337,709	+				-0.7
4,337,709	+				+0.8
4,337,758	+				-0.3
4,337,766	-				-0.4
4,337,768	+				-1.0
4,337,869	+				-0.4
4,337,882	-				-1.2
4,337,885	-				+0.7
4,337,889	+				+1.7
4,337,889	+				+0.9
4,337,889	+				+1.3
4,337,897	-				-3.5
4,337,950	+				-1.1
4,338,019	+		MPMX20_04138	0.12	-1.0
4,338,027	-		MPMX20_04138	0.13	+1.2
4,338,053	+		MPMX20_04138	0.15	+2.7
4,338,116	+		MPMX20_04138	0.20	-1.5
4,338,152	+		MPMX20_04138	0.22	+0.9
4,338,161	-		MPMX20_04138	0.23	+0.5
4,338,161	-		MPMX20_04138	0.23	-2.8
4,338,199	-		MPMX20_04138	0.26	-0.7
4,338,199	-		MPMX20_04138	0.26	-0.8
4,338,201	+		MPMX20_04138	0.26	+0.2
4,338,208	+		MPMX20_04138	0.26	-2.0
4,338,208	+		MPMX20_04138	0.26	+0.2
4,338,208	+		MPMX20_04138	0.26	+1.0
4,338,216	-		MPMX20_04138	0.27	-2.8
4,338,216	-		MPMX20_04138	0.27	-1.3
4,338,226	+		MPMX20_04138	0.28	-0.8
4,338,249	+		MPMX20_04138	0.29	+0.7
4,338,259	+		MPMX20_04138	0.30	-2.0
4,338,272	+		MPMX20_04138	0.31	-0.6
4,338,282	-		MPMX20_04138	0.32	-1.5
4,338,332	-		MPMX20_04138	0.35	+1.2
4,338,380	+		MPMX20_04138	0.39	+1.7
4,338,413	-		MPMX20_04138	0.41	-2.4
4,338,477	+		MPMX20_04138	0.46	-0.3
4,338,529	+		MPMX20_04138	0.50	-1.8
4,338,562	-		MPMX20_04138	0.52	-2.9
4,338,642	+		MPMX20_04138	0.58	-1.5
4,338,645	-		MPMX20_04138	0.58	-0.1
4,338,645	-		MPMX20_04138	0.58	-1.3
4,338,703	-		MPMX20_04138	0.62	+0.4
4,338,732	+		MPMX20_04138	0.65	-1.5
4,338,732	+		MPMX20_04138	0.65	-0.6
4,338,809	+		MPMX20_04138	0.70	+2.2
4,338,817	-		MPMX20_04138	0.71	-0.6
4,338,878	+		MPMX20_04138	0.75	-2.3
4,338,978	+		MPMX20_04138	0.83	+0.5
4,338,978	+		MPMX20_04138	0.83	-1.1
4,338,986	-		MPMX20_04138	0.83	-0.4
4,338,986	-		MPMX20_04138	0.83	-1.8
4,338,986	-		MPMX20_04138	0.83	-1.5
4,338,986	-		MPMX20_04138	0.83	-0.6
4,339,029	-		MPMX20_04138	0.86	-0.8
4,339,050	+		MPMX20_04138	0.88	+0.1
4,339,050	+		MPMX20_04138	0.88	-0.3
4,339,122	+				-0.4
4,339,174	+				-1.0
4,339,182	-				+0.4
4,339,204	-				-0.9
4,339,225	-				-0.3
4,339,242	-				-1.1
4,339,242	-				-2.8