Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03977

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,170,885	+				-1.3
4,170,905	-				-1.6
4,170,913	+				-2.4
4,170,948	+				-2.3
4,170,962	+				+0.7
4,170,962	+				+0.4
4,170,962	+				-1.0
4,170,970	-				-1.7
4,170,975	+				+0.1
4,171,048	+				-2.2
4,171,083	-				+1.1
4,171,132	+				-1.2
4,171,172	+				+0.7
4,171,239	+				-0.6
4,171,484	-		MPMX20_03977	0.26	+1.0
4,171,519	+		MPMX20_03977	0.29	-1.7
4,171,540	+		MPMX20_03977	0.31	+1.7
4,171,591	+		MPMX20_03977	0.35	+3.3
4,171,675	-		MPMX20_03977	0.42	-0.6
4,171,793	+		MPMX20_03977	0.53	-1.9
4,171,910	-		MPMX20_03977	0.63	+3.1
4,171,922	+		MPMX20_03977	0.64	-0.4
4,171,955	-		MPMX20_03977	0.66	+0.7
4,171,966	-		MPMX20_03977	0.67	-1.0
4,171,970	+		MPMX20_03977	0.68	-2.6
4,171,971	+		MPMX20_03977	0.68	+0.5
4,172,053	+		MPMX20_03977	0.75	-2.5
4,172,089	+		MPMX20_03977	0.78	-1.8
4,172,094	+		MPMX20_03977	0.78	+1.9
4,172,173	+		MPMX20_03977	0.85	+2.1
4,172,173	+		MPMX20_03977	0.85	+1.9
4,172,218	+		MPMX20_03977	0.89	+0.7
4,172,238	-				-2.1
4,172,309	+				-2.3
4,172,327	+				-0.1
4,172,335	-				+0.1
4,172,504	-		MPMX20_03978	0.20	+0.6
4,172,537	-		MPMX20_03978	0.25	-2.0
4,172,567	+		MPMX20_03978	0.29	+3.4
4,172,597	-		MPMX20_03978	0.33	-2.5
4,172,687	+		MPMX20_03978	0.44	-0.1
4,172,689	-		MPMX20_03978	0.45	+1.3
4,172,690	-		MPMX20_03978	0.45	+0.4
4,172,765	-		MPMX20_03978	0.55	-1.4
4,172,821	+		MPMX20_03978	0.62	+0.1
4,172,840	+		MPMX20_03978	0.64	+0.1
4,172,840	+		MPMX20_03978	0.64	-0.6
4,172,840	+		MPMX20_03978	0.64	+0.2
4,172,847	+		MPMX20_03978	0.65	+1.7
4,172,847	+		MPMX20_03978	0.65	-2.1
4,172,847	+		MPMX20_03978	0.65	+1.1
4,172,847	+		MPMX20_03978	0.65	-2.7
4,172,848	-		MPMX20_03978	0.65	+0.4
4,172,855	-		MPMX20_03978	0.66	+0.5
4,172,855	-		MPMX20_03978	0.66	+0.4
4,172,917	+		MPMX20_03978	0.74	-1.7
4,172,922	-		MPMX20_03978	0.75	-2.2
4,173,027	+		MPMX20_03978	0.89	+1.1
4,173,091	-				-0.8
4,173,094	+				-1.5
4,173,114	+				+2.5
4,173,116	-				-1.5
4,173,121	-				+0.9