Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03876

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
4,083,033	+		MPMX20_03875	0.30	-0.6
4,083,043	+		MPMX20_03875	0.31	-1.6
4,083,051	-		MPMX20_03875	0.32	-1.4
4,083,109	-		MPMX20_03875	0.39	+0.6
4,083,133	+		MPMX20_03875	0.42	+1.4
4,083,236	-		MPMX20_03875	0.55	+1.7
4,083,293	-		MPMX20_03875	0.62	-0.2
4,083,304	+		MPMX20_03875	0.63	-1.1
4,083,305	+		MPMX20_03875	0.63	-0.5
4,083,312	-		MPMX20_03875	0.64	+1.4
4,083,349	+		MPMX20_03875	0.69	+0.1
4,083,357	-		MPMX20_03875	0.70	+5.2
4,083,357	-		MPMX20_03875	0.70	-1.7
4,083,357	-		MPMX20_03875	0.70	+1.0
4,083,393	+		MPMX20_03875	0.74	-1.9
4,083,411	+		MPMX20_03875	0.77	+0.8
4,083,438	+		MPMX20_03875	0.80	+0.3
4,083,443	+		MPMX20_03875	0.80	+0.7
4,083,479	+		MPMX20_03875	0.85	+2.3
4,083,481	+		MPMX20_03875	0.85	+0.0
4,083,574	+				+0.3
4,083,577	-				-0.2
4,083,590	+				-0.9
4,083,598	-				-2.2
4,083,598	-				-2.0
4,083,673	+				+0.6
4,083,708	+				+1.3
4,083,794	+				+1.5
4,083,802	-				-2.1
4,083,802	-				+0.0
4,083,802	-				+1.3
4,083,914	+				-0.5
4,083,949	+				-2.0
4,083,957	-				+1.6
4,083,992	+				+0.3
4,084,001	+				-0.6
4,084,001	+				-3.1
4,084,001	-				-0.3
4,084,009	-				+1.3
4,084,035	+				-0.7
4,084,068	-				-0.7
4,084,078	-				-0.8
4,084,085	+				-2.2
4,084,093	-				+1.5
4,084,120	+				-1.1
4,084,160	+				-1.7
4,084,204	-		MPMX20_03876	0.10	-0.2
4,084,214	-		MPMX20_03876	0.11	-0.7
4,084,267	+		MPMX20_03876	0.13	-2.1
4,084,275	-		MPMX20_03876	0.13	+3.8
4,084,275	-		MPMX20_03876	0.13	-0.7
4,084,306	-		MPMX20_03876	0.15	+1.6
4,084,306	-		MPMX20_03876	0.15	-0.2
4,084,349	-		MPMX20_03876	0.17	+0.0
4,084,373	+		MPMX20_03876	0.18	-0.5
4,084,381	-		MPMX20_03876	0.18	-2.4
4,084,397	+		MPMX20_03876	0.19	+0.7
4,084,418	-		MPMX20_03876	0.20	-2.3
4,084,418	-		MPMX20_03876	0.20	-0.6
4,084,418	-		MPMX20_03876	0.20	-0.4
4,084,418	-		MPMX20_03876	0.20	-0.6
4,084,418	-		MPMX20_03876	0.20	-1.6
4,084,421	+		MPMX20_03876	0.20	+0.3
4,084,463	-		MPMX20_03876	0.22	-0.1
4,084,487	+		MPMX20_03876	0.23	+1.0
4,084,557	-		MPMX20_03876	0.27	+0.3
4,084,574	+		MPMX20_03876	0.27	+1.2
4,084,577	-		MPMX20_03876	0.28	+1.6
4,084,577	-		MPMX20_03876	0.28	-3.1
4,084,642	+		MPMX20_03876	0.31	+1.2
4,084,662	+		MPMX20_03876	0.32	+1.0
4,084,670	-		MPMX20_03876	0.32	-1.0
4,084,710	-		MPMX20_03876	0.34	-1.3
4,084,719	+		MPMX20_03876	0.34	-0.2
4,084,897	+		MPMX20_03876	0.43	+0.5
4,084,969	+		MPMX20_03876	0.46	+1.0
4,084,977	-		MPMX20_03876	0.46	-0.2
4,085,036	-		MPMX20_03876	0.49	+1.0
4,085,045	+		MPMX20_03876	0.49	+2.2
4,085,053	-		MPMX20_03876	0.50	+0.4
4,085,053	-		MPMX20_03876	0.50	-3.2
4,085,053	-		MPMX20_03876	0.50	-1.8
4,085,055	+		MPMX20_03876	0.50	+3.6
4,085,145	-		MPMX20_03876	0.54	+0.3
4,085,147	+		MPMX20_03876	0.54	-2.3
4,085,147	+		MPMX20_03876	0.54	+0.9
4,085,155	-		MPMX20_03876	0.55	-1.6
4,085,155	-		MPMX20_03876	0.55	+1.0
4,085,215	+		MPMX20_03876	0.57	-1.8
4,085,223	-		MPMX20_03876	0.58	+1.1
4,085,223	-		MPMX20_03876	0.58	+5.6
4,085,241	+		MPMX20_03876	0.59	+1.5
4,085,263	+		MPMX20_03876	0.60	+1.0
4,085,289	+		MPMX20_03876	0.61	+2.1
4,085,289	+		MPMX20_03876	0.61	+1.4
4,085,293	+		MPMX20_03876	0.61	+2.9
4,085,297	-		MPMX20_03876	0.61	-1.6
4,085,301	-		MPMX20_03876	0.61	+0.4
4,085,338	+		MPMX20_03876	0.63	-0.2
4,085,338	+		MPMX20_03876	0.63	+1.3
4,085,346	-		MPMX20_03876	0.63	-0.5
4,085,346	-		MPMX20_03876	0.63	+0.7
4,085,346	-		MPMX20_03876	0.63	+0.3
4,085,346	-		MPMX20_03876	0.63	-1.4
4,085,346	-		MPMX20_03876	0.63	+1.9
4,085,357	+		MPMX20_03876	0.64	+0.5
4,085,365	-		MPMX20_03876	0.64	-2.6
4,085,564	-		MPMX20_03876	0.74	-1.2
4,085,574	-		MPMX20_03876	0.74	+1.0
4,085,574	-		MPMX20_03876	0.74	-1.8
4,085,574	-		MPMX20_03876	0.74	+0.2
4,085,582	-		MPMX20_03876	0.75	+0.3
4,085,614	-		MPMX20_03876	0.76	-2.1
4,085,628	-		MPMX20_03876	0.77	+0.6
4,085,744	+		MPMX20_03876	0.82	-1.1
4,085,744	+		MPMX20_03876	0.82	+1.6
4,085,752	-		MPMX20_03876	0.82	+1.0
4,085,752	-		MPMX20_03876	0.82	+1.0
4,085,752	-		MPMX20_03876	0.82	-0.1
4,085,752	-		MPMX20_03876	0.82	-1.6
4,085,812	-		MPMX20_03876	0.85	-1.1
4,085,903	-		MPMX20_03876	0.89	+1.0
4,085,954	+				+1.3
4,085,954	+				-3.8
4,085,969	-				-0.4
4,086,002	+				-0.3
4,086,010	-				+2.3
4,086,014	+				+0.4
4,086,037	+				-0.9
4,086,098	+				-1.9
4,086,196	+				-1.4