Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03672

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,866,597	+		MPMX20_03671	0.39	-0.0
3,866,602	+		MPMX20_03671	0.39	-0.6
3,866,642	-		MPMX20_03671	0.44	-1.8
3,866,644	+		MPMX20_03671	0.44	-2.6
3,866,644	+		MPMX20_03671	0.44	+2.4
3,866,652	-		MPMX20_03671	0.45	-1.4
3,866,652	-		MPMX20_03671	0.45	-0.6
3,866,695	+		MPMX20_03671	0.50	-2.1
3,866,703	-		MPMX20_03671	0.50	-3.7
3,866,703	-		MPMX20_03671	0.50	-1.6
3,866,703	-		MPMX20_03671	0.50	-2.4
3,866,732	+		MPMX20_03671	0.54	-1.7
3,866,772	+		MPMX20_03671	0.58	+1.0
3,866,877	+		MPMX20_03671	0.69	+0.2
3,866,886	+		MPMX20_03671	0.70	-0.2
3,866,886	+		MPMX20_03671	0.70	+0.7
3,866,977	+		MPMX20_03671	0.80	-0.7
3,866,987	-		MPMX20_03671	0.81	+1.2
3,867,004	+		MPMX20_03671	0.83	+0.3
3,867,004	+		MPMX20_03671	0.83	+0.8
3,867,004	+		MPMX20_03671	0.83	-0.6
3,867,012	-		MPMX20_03671	0.84	-1.8
3,867,012	-		MPMX20_03671	0.84	-2.1
3,867,012	-		MPMX20_03671	0.84	-0.5
3,867,129	-				-0.5
3,867,137	-				-3.1
3,867,148	+				+0.5
3,867,350	+				-0.2
3,867,358	-				-0.7
3,867,358	-				+0.3
3,867,363	-				+0.0
3,867,389	+				+0.5
3,867,389	+				+1.6
3,867,433	+				-0.4
3,867,433	+				+0.4
3,867,433	+				+0.7
3,867,455	-				-3.5
3,867,455	-				-1.4
3,867,456	+				-0.7
3,867,461	+				+0.6
3,867,539	-		MPMX20_03672	0.14	-4.0
3,867,544	-		MPMX20_03672	0.16	-1.8
3,867,565	-		MPMX20_03672	0.25	+1.4
3,867,565	-		MPMX20_03672	0.25	-1.0
3,867,607	-		MPMX20_03672	0.44	-3.4
3,867,666	-		MPMX20_03672	0.70	-0.7
3,867,666	-		MPMX20_03672	0.70	+0.3
3,867,686	+		MPMX20_03672	0.79	-0.9
3,867,686	+		MPMX20_03672	0.79	-3.0
3,867,686	+		MPMX20_03672	0.79	+1.3
3,867,686	+		MPMX20_03672	0.79	-0.5
3,867,686	+		MPMX20_03672	0.79	-1.4
3,867,693	+		MPMX20_03672	0.82	-3.6
3,867,693	+		MPMX20_03672	0.82	-0.6
3,867,693	+		MPMX20_03672	0.82	-0.2
3,867,694	-		MPMX20_03672	0.82	+0.0
3,867,694	-		MPMX20_03672	0.82	-0.6
3,867,694	-		MPMX20_03672	0.82	+0.7
3,867,701	-		MPMX20_03672	0.85	-0.6
3,867,705	+		MPMX20_03672	0.87	+0.0
3,867,711	+		MPMX20_03672	0.89	-2.7
3,867,713	-				-2.4
3,867,722	-				-1.5
3,867,752	+				+0.1
3,867,760	-				+0.0
3,867,792	-				-1.0
3,867,792	-				+0.6
3,867,792	-				-2.3
3,867,804	-				-0.3
3,867,880	-				-2.3
3,867,881	+				+1.9
3,867,881	+				-0.9
3,867,881	+				+0.7
3,867,958	-				-0.3
3,867,960	+				-0.5
3,867,961	-				-2.3
3,867,968	-				-2.5
3,867,972	+				+0.7
3,867,972	+				-0.9
3,867,972	+				-1.2
3,867,978	-				-1.8
3,867,980	-				-0.6
3,867,980	-				-1.4
3,867,995	+				+1.7
3,868,023	-				-1.8
3,868,028	+				-0.7
3,868,049	-				+0.3
3,868,059	+		MPMX20_03673	0.10	-1.0
3,868,059	+		MPMX20_03673	0.10	+0.2
3,868,121	-		MPMX20_03673	0.15	-1.0
3,868,128	+		MPMX20_03673	0.16	+0.0
3,868,128	+		MPMX20_03673	0.16	+1.0
3,868,136	-		MPMX20_03673	0.17	-3.0
3,868,156	+		MPMX20_03673	0.18	+1.0
3,868,221	-		MPMX20_03673	0.24	-1.7
3,868,228	+		MPMX20_03673	0.24	+1.0
3,868,228	+		MPMX20_03673	0.24	-0.7
3,868,233	+		MPMX20_03673	0.25	-0.3
3,868,236	-		MPMX20_03673	0.25	-1.0
3,868,241	-		MPMX20_03673	0.25	-0.1
3,868,291	-		MPMX20_03673	0.29	-1.3
3,868,471	-		MPMX20_03673	0.44	-2.2
3,868,528	+		MPMX20_03673	0.49	-0.3
3,868,536	-		MPMX20_03673	0.50	+0.0
3,868,610	+		MPMX20_03673	0.56	-0.1
3,868,618	-		MPMX20_03673	0.56	+2.0
3,868,619	+		MPMX20_03673	0.57	-1.7
3,868,689	-		MPMX20_03673	0.62	-0.0
3,868,711	-		MPMX20_03673	0.64	-0.4
3,868,711	-		MPMX20_03673	0.64	+0.3