Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03583

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,771,865	+				+0.8
3,771,870	+				-1.4
3,771,916	-				+0.9
3,771,938	+				+2.5
3,771,995	-				+1.2
3,772,009	+				-0.3
3,772,010	+				+3.0
3,772,010	+				+2.0
3,772,010	+				+1.5
3,772,018	-				-1.5
3,772,021	+				-1.7
3,772,043	-				+0.3
3,772,043	-				-0.5
3,772,069	+		MPMX20_03582	0.12	+0.2
3,772,069	+		MPMX20_03582	0.12	+0.3
3,772,077	-		MPMX20_03582	0.13	+0.1
3,772,167	-		MPMX20_03582	0.23	+0.5
3,772,185	+		MPMX20_03582	0.25	-0.4
3,772,190	+		MPMX20_03582	0.25	-2.5
3,772,193	-		MPMX20_03582	0.26	-1.3
3,772,193	-		MPMX20_03582	0.26	-0.7
3,772,221	+		MPMX20_03582	0.29	+0.6
3,772,221	+		MPMX20_03582	0.29	-2.3
3,772,224	-		MPMX20_03582	0.29	+1.1
3,772,229	-		MPMX20_03582	0.30	-1.7
3,772,229	-		MPMX20_03582	0.30	-0.7
3,772,229	-		MPMX20_03582	0.30	-1.2
3,772,229	-		MPMX20_03582	0.30	+0.5
3,772,274	+		MPMX20_03582	0.35	+3.1
3,772,282	-		MPMX20_03582	0.36	-1.0
3,772,347	-		MPMX20_03582	0.43	-1.4
3,772,349	+		MPMX20_03582	0.44	-1.8
3,772,349	+		MPMX20_03582	0.44	-0.8
3,772,411	+		MPMX20_03582	0.51	-2.3
3,772,411	+		MPMX20_03582	0.51	+1.4
3,772,419	-		MPMX20_03582	0.52	-0.8
3,772,419	-		MPMX20_03582	0.52	-0.2
3,772,419	-		MPMX20_03582	0.52	-2.0
3,772,475	-		MPMX20_03582	0.58	-1.7
3,772,475	-		MPMX20_03582	0.58	+0.6
3,772,475	-		MPMX20_03582	0.58	+1.6
3,772,518	+		MPMX20_03582	0.63	-2.1
3,772,526	-		MPMX20_03582	0.64	-0.4
3,772,553	-		MPMX20_03582	0.67	+0.8
3,772,600	-		MPMX20_03582	0.72	+1.1
3,772,606	+		MPMX20_03582	0.73	+0.1
3,772,627	+		MPMX20_03582	0.75	-0.1
3,772,629	-		MPMX20_03582	0.75	+0.8
3,772,635	-		MPMX20_03582	0.76	-0.6
3,772,640	-		MPMX20_03582	0.77	+2.3
3,772,640	-		MPMX20_03582	0.77	-2.3
3,772,647	+		MPMX20_03582	0.77	+0.9
3,772,657	-		MPMX20_03582	0.79	+1.4
3,772,661	+		MPMX20_03582	0.79	-1.2
3,772,661	+		MPMX20_03582	0.79	+1.2
3,772,661	+		MPMX20_03582	0.79	-1.8
3,772,669	+		MPMX20_03582	0.80	-2.4
3,772,669	-		MPMX20_03582	0.80	+0.9
3,772,669	-		MPMX20_03582	0.80	-0.5
3,772,707	-		MPMX20_03582	0.84	+0.8
3,772,727	+		MPMX20_03582	0.87	-1.1
3,772,727	+		MPMX20_03582	0.87	+0.5
3,772,729	+		MPMX20_03582	0.87	+0.9
3,772,801	+				+1.0
3,772,809	-				+0.6
3,772,809	-				+1.6
3,772,878	+				-0.7
3,772,878	+				-1.6
3,772,974	+		MPMX20_03583	0.13	-0.2
3,772,974	+		MPMX20_03583	0.13	+1.6
3,772,982	-		MPMX20_03583	0.14	-2.7
3,772,982	-		MPMX20_03583	0.14	+1.6
3,772,992	-		MPMX20_03583	0.15	+0.4
3,773,177	+		MPMX20_03583	0.37	+0.0
3,773,185	-		MPMX20_03583	0.38	-0.8
3,773,274	-		MPMX20_03583	0.48	+1.1
3,773,312	-		MPMX20_03583	0.53	-0.2
3,773,328	-		MPMX20_03583	0.54	+0.6
3,773,347	-		MPMX20_03583	0.57	+1.1
3,773,347	-		MPMX20_03583	0.57	+2.9
3,773,404	+		MPMX20_03583	0.63	-2.4
3,773,431	+		MPMX20_03583	0.66	-0.6
3,773,448	-		MPMX20_03583	0.68	+0.8
3,773,448	-		MPMX20_03583	0.68	-0.5
3,773,529	-		MPMX20_03583	0.78	-0.7
3,773,598	-		MPMX20_03583	0.86	-1.9
3,773,631	-		MPMX20_03583	0.90	-2.4
3,773,654	+				+0.6
3,773,662	-				-1.8
3,773,662	-				-0.4
3,773,678	+				-0.2
3,773,679	-				+2.1
3,773,723	+				+1.6
3,773,746	-				+0.3
3,773,774	-				-1.4
3,773,826	+		MPMX20_03584	0.16	-0.7
3,773,845	-		MPMX20_03584	0.19	-0.5
3,773,871	+		MPMX20_03584	0.23	-1.0
3,773,937	-		MPMX20_03584	0.33	-2.3
3,773,968	-		MPMX20_03584	0.37	+0.1
3,773,980	-		MPMX20_03584	0.39	-0.7
3,774,008	+		MPMX20_03584	0.43	-0.2
3,774,016	-		MPMX20_03584	0.44	-1.1
3,774,041	-		MPMX20_03584	0.48	+1.1
3,774,096	+		MPMX20_03584	0.56	-0.9
3,774,144	+		MPMX20_03584	0.63	+0.8
3,774,144	+		MPMX20_03584	0.63	-0.7
3,774,152	-		MPMX20_03584	0.65	+0.9
3,774,154	-		MPMX20_03584	0.65	-1.5
3,774,161	+		MPMX20_03584	0.66	+0.9
3,774,164	-		MPMX20_03584	0.66	-0.8
3,774,174	-		MPMX20_03584	0.68	-0.5
3,774,302	+		MPMX20_03584	0.87	-0.8
3,774,312	+		MPMX20_03584	0.88	-1.8
3,774,327	+				+0.1
3,774,387	+				+1.6
3,774,387	+				-0.4
3,774,390	-				+0.2
3,774,396	-				+0.6
3,774,400	-				-0.1
3,774,442	+				+2.9
3,774,446	-				-0.8
3,774,527	-				+0.5
3,774,577	+				+1.7
3,774,577	+				+0.9
3,774,582	+				-1.2
3,774,585	-				-0.8
3,774,601	+				-0.3
3,774,609	-				+1.1
3,774,700	+				-0.2
3,774,707	+				-2.4