Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03396

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,576,418	+		MPMX20_03395	0.29	-1.2
3,576,418	+		MPMX20_03395	0.29	-0.4
3,576,426	-		MPMX20_03395	0.29	-0.6
3,576,585	-		MPMX20_03395	0.43	+0.0
3,576,609	+		MPMX20_03395	0.45	+0.5
3,576,638	-		MPMX20_03395	0.48	-1.4
3,576,638	-		MPMX20_03395	0.48	+1.7
3,576,737	-		MPMX20_03395	0.56	+0.8
3,576,776	+		MPMX20_03395	0.59	-0.9
3,576,776	+		MPMX20_03395	0.59	+0.7
3,576,776	+		MPMX20_03395	0.59	-1.7
3,576,776	+		MPMX20_03395	0.59	-0.1
3,576,776	+		MPMX20_03395	0.59	+1.4
3,576,776	+		MPMX20_03395	0.59	-2.3
3,576,776	+		MPMX20_03395	0.59	+0.7
3,576,784	-		MPMX20_03395	0.60	-1.6
3,576,784	-		MPMX20_03395	0.60	+0.5
3,576,784	-		MPMX20_03395	0.60	-0.2
3,576,795	+		MPMX20_03395	0.61	-0.1
3,576,817	+		MPMX20_03395	0.63	-1.1
3,576,870	+		MPMX20_03395	0.68	-0.5
3,576,878	+		MPMX20_03395	0.68	-1.2
3,576,881	-		MPMX20_03395	0.68	+0.0
3,577,019	+		MPMX20_03395	0.80	+2.0
3,577,033	+		MPMX20_03395	0.81	+0.1
3,577,062	+		MPMX20_03395	0.84	+0.4
3,577,102	+		MPMX20_03395	0.87	-0.8
3,577,115	-		MPMX20_03395	0.89	-1.5
3,577,165	+				-2.1
3,577,165	+				-2.0
3,577,169	+				-0.1
3,577,221	+				+0.5
3,577,229	-				-0.7
3,577,276	-				+3.7
3,577,282	-				+1.9
3,577,282	-				+0.5
3,577,282	-				+2.0
3,577,282	-				-0.7
3,577,323	-				-0.5
3,577,341	-				+0.1
3,577,343	+				+2.2
3,577,370	-				+1.0
3,577,372	-				+0.7
3,577,411	-				+0.4
3,577,489	+		MPMX20_03396	0.16	-3.5
3,577,543	+		MPMX20_03396	0.29	-1.1
3,577,543	+		MPMX20_03396	0.29	-1.0
3,577,543	+		MPMX20_03396	0.29	-2.0
3,577,545	+		MPMX20_03396	0.29	-0.3
3,577,545	+		MPMX20_03396	0.29	-1.5
3,577,545	+		MPMX20_03396	0.29	-2.2
3,577,551	-		MPMX20_03396	0.31	+0.7
3,577,553	-		MPMX20_03396	0.31	-3.0
3,577,553	-		MPMX20_03396	0.31	+0.4
3,577,603	-		MPMX20_03396	0.43	-1.7
3,577,647	-		MPMX20_03396	0.53	-0.4
3,577,647	-		MPMX20_03396	0.53	-0.5
3,577,653	+		MPMX20_03396	0.54	-1.3
3,577,727	+		MPMX20_03396	0.72	-2.3
3,577,858	+				-1.5
3,577,866	-				-0.3
3,577,895	-				+1.1
3,577,980	+				-0.3
3,577,980	+				-0.1
3,577,988	-				-1.6
3,578,032	+				-2.7
3,578,094	+				-1.7
3,578,153	+				-1.1
3,578,248	+		MPMX20_03397	0.10	+2.7
3,578,248	+		MPMX20_03397	0.10	+1.1
3,578,261	-		MPMX20_03397	0.11	-0.0
3,578,278	-		MPMX20_03397	0.12	-0.5
3,578,299	+		MPMX20_03397	0.13	+0.3
3,578,365	-		MPMX20_03397	0.15	-2.2
3,578,385	-		MPMX20_03397	0.16	+0.7
3,578,638	+		MPMX20_03397	0.27	-1.0
3,578,684	+		MPMX20_03397	0.29	+0.2
3,578,690	-		MPMX20_03397	0.29	-1.7
3,578,749	+		MPMX20_03397	0.32	-0.4
3,578,755	+		MPMX20_03397	0.32	-4.0
3,578,811	+		MPMX20_03397	0.35	-1.0
3,578,816	+		MPMX20_03397	0.35	+2.7