Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03325

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,493,063	-		MPMX20_03324	0.72	-0.7
3,493,063	-		MPMX20_03324	0.72	-2.3
3,493,089	+		MPMX20_03324	0.73	-1.5
3,493,164	+		MPMX20_03324	0.76	-2.1
3,493,168	-		MPMX20_03324	0.77	-0.6
3,493,213	-		MPMX20_03324	0.79	-1.3
3,493,237	+		MPMX20_03324	0.80	-0.3
3,493,245	-		MPMX20_03324	0.80	+0.6
3,493,301	-		MPMX20_03324	0.82	-2.3
3,493,306	-		MPMX20_03324	0.83	-2.0
3,493,583	+				-1.8
3,493,593	+				+1.0
3,493,732	-				-1.4
3,493,766	-				-1.5
3,493,779	-				-0.1
3,493,801	+				+1.9
3,493,825	-				-0.2
3,493,858	-				-1.9
3,493,863	+				+0.1
3,493,947	-				+1.6
3,493,948	-				-0.4
3,494,080	-				+0.6
3,494,080	-				+0.1
3,494,095	+		MPMX20_03325	0.11	-0.2
3,494,105	+		MPMX20_03325	0.12	-1.5
3,494,105	+		MPMX20_03325	0.12	+2.5
3,494,161	+		MPMX20_03325	0.18	+0.9
3,494,161	+		MPMX20_03325	0.18	-2.2
3,494,161	+		MPMX20_03325	0.18	-0.5
3,494,169	-		MPMX20_03325	0.19	-0.2
3,494,169	-		MPMX20_03325	0.19	+0.2
3,494,179	-		MPMX20_03325	0.20	-0.2
3,494,184	-		MPMX20_03325	0.20	+1.1
3,494,303	+		MPMX20_03325	0.33	+1.0
3,494,386	-		MPMX20_03325	0.41	-1.7
3,494,388	+		MPMX20_03325	0.42	+2.0
3,494,462	+		MPMX20_03325	0.49	+1.2
3,494,478	+		MPMX20_03325	0.51	-0.1
3,494,483	+		MPMX20_03325	0.52	-0.3
3,494,485	-		MPMX20_03325	0.52	+1.5
3,494,547	-		MPMX20_03325	0.58	-1.0
3,494,623	+		MPMX20_03325	0.66	+0.4
3,494,628	+		MPMX20_03325	0.67	-1.3
3,494,631	-		MPMX20_03325	0.67	-3.0
3,494,657	-		MPMX20_03325	0.70	-2.2
3,494,704	+		MPMX20_03325	0.75	+1.1
3,494,709	-		MPMX20_03325	0.75	+1.4
3,494,722	+		MPMX20_03325	0.77	+0.4
3,494,722	+		MPMX20_03325	0.77	-0.4
3,494,722	+		MPMX20_03325	0.77	-1.1
3,494,722	+		MPMX20_03325	0.77	+0.1
3,494,722	+		MPMX20_03325	0.77	-2.2
3,494,722	+		MPMX20_03325	0.77	-0.3
3,494,722	+		MPMX20_03325	0.77	+0.3
3,494,722	+		MPMX20_03325	0.77	-1.5
3,494,722	+		MPMX20_03325	0.77	-1.6
3,494,722	+		MPMX20_03325	0.77	+2.0
3,494,722	+		MPMX20_03325	0.77	-0.3
3,494,730	-		MPMX20_03325	0.78	-0.7
3,494,730	-		MPMX20_03325	0.78	-0.1
3,494,730	-		MPMX20_03325	0.78	+2.6
3,494,730	-		MPMX20_03325	0.78	+0.0
3,494,730	-		MPMX20_03325	0.78	-1.4
3,494,730	-		MPMX20_03325	0.78	-0.4
3,494,785	+		MPMX20_03325	0.83	-2.0
3,494,793	-		MPMX20_03325	0.84	-3.1
3,494,804	+		MPMX20_03325	0.85	+0.8
3,494,812	-		MPMX20_03325	0.86	-3.5
3,494,899	-				-2.3
3,494,944	-				+0.3
3,494,969	+				-0.0
3,494,974	+				+0.3
3,494,974	+				-0.1
3,494,974	-				+0.5
3,495,036	+				-1.2
3,495,128	-				+2.1
3,495,134	+				-2.5
3,495,142	-				+0.3
3,495,142	-				-0.2
3,495,158	+				-2.9
3,495,158	+				+0.5
3,495,158	+				-1.1
3,495,158	+				+0.3
3,495,166	-		MPMX20_03326	0.10	-2.4
3,495,166	-		MPMX20_03326	0.10	+1.0
3,495,166	-		MPMX20_03326	0.10	-0.9
3,495,166	-		MPMX20_03326	0.10	-1.0
3,495,168	+		MPMX20_03326	0.10	-0.5
3,495,168	+		MPMX20_03326	0.10	-0.9
3,495,176	-		MPMX20_03326	0.11	-1.6
3,495,176	-		MPMX20_03326	0.11	-2.7
3,495,186	-		MPMX20_03326	0.11	+0.2
3,495,269	+		MPMX20_03326	0.15	-0.4
3,495,307	+		MPMX20_03326	0.17	-0.7
3,495,313	+		MPMX20_03326	0.18	-0.5
3,495,313	+		MPMX20_03326	0.18	+0.7
3,495,313	+		MPMX20_03326	0.18	-1.7
3,495,340	-		MPMX20_03326	0.19	-2.0
3,495,411	+		MPMX20_03326	0.23	-0.5
3,495,428	+		MPMX20_03326	0.23	-1.8
3,495,473	+		MPMX20_03326	0.26	-0.2
3,495,481	-		MPMX20_03326	0.26	+1.7
3,495,481	-		MPMX20_03326	0.26	-2.8
3,495,481	-		MPMX20_03326	0.26	-1.4
3,495,483	+		MPMX20_03326	0.26	-1.5
3,495,507	+		MPMX20_03326	0.27	-2.4
3,495,562	+		MPMX20_03326	0.30	-3.2
3,495,751	-		MPMX20_03326	0.40	+0.3
3,495,756	-		MPMX20_03326	0.40	-0.5
3,495,769	+		MPMX20_03326	0.41	-1.4
3,495,777	-		MPMX20_03326	0.41	-1.7
3,495,833	-		MPMX20_03326	0.44	+0.5
3,495,853	-		MPMX20_03326	0.45	+1.2