Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03288

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,460,376	+		MPMX20_03287	0.21	+0.9
3,460,384	-		MPMX20_03287	0.22	-1.0
3,460,430	-		MPMX20_03287	0.26	+0.5
3,460,430	-		MPMX20_03287	0.26	+0.8
3,460,440	-		MPMX20_03287	0.27	-2.5
3,460,457	-		MPMX20_03287	0.28	+1.3
3,460,503	-		MPMX20_03287	0.32	-0.7
3,460,545	+		MPMX20_03287	0.36	-0.1
3,460,550	-		MPMX20_03287	0.36	+1.0
3,460,570	+		MPMX20_03287	0.38	-1.4
3,460,621	+		MPMX20_03287	0.42	-0.2
3,460,679	-		MPMX20_03287	0.47	-0.5
3,460,715	+		MPMX20_03287	0.50	-0.8
3,460,723	-		MPMX20_03287	0.51	-0.7
3,460,723	-		MPMX20_03287	0.51	+0.8
3,460,726	+		MPMX20_03287	0.51	-1.4
3,460,734	-		MPMX20_03287	0.52	-2.7
3,460,761	-		MPMX20_03287	0.54	+4.1
3,460,775	-		MPMX20_03287	0.55	-0.4
3,460,814	+		MPMX20_03287	0.58	-0.7
3,460,822	-		MPMX20_03287	0.59	-2.3
3,460,822	-		MPMX20_03287	0.59	-1.9
3,460,822	-		MPMX20_03287	0.59	-1.6
3,460,857	+		MPMX20_03287	0.62	+1.0
3,460,924	-		MPMX20_03287	0.68	+0.0
3,460,948	-		MPMX20_03287	0.70	-2.2
3,460,996	+		MPMX20_03287	0.74	-0.1
3,461,004	-		MPMX20_03287	0.74	-1.6
3,461,037	+		MPMX20_03287	0.77	+1.3
3,461,132	+		MPMX20_03287	0.85	-0.5
3,461,154	-		MPMX20_03287	0.87	+2.1
3,461,169	-		MPMX20_03287	0.88	-0.2
3,461,218	-				-4.1
3,461,218	-				-2.2
3,461,218	-				+0.8
3,461,233	-				+2.0
3,461,248	+				+2.1
3,461,256	+				-0.5
3,461,256	+				-0.2
3,461,256	+				+1.5
3,461,256	+				-1.2
3,461,256	+				-1.6
3,461,256	+				-2.0
3,461,256	+				-0.3
3,461,264	-				-2.6
3,461,264	-				-2.0
3,461,266	+				-0.9
3,461,266	+				+0.3
3,461,311	-				+0.6
3,461,414	+				-3.2
3,461,415	-				-0.2
3,461,450	-				-0.7
3,461,450	-				+1.3
3,461,480	+				-1.8
3,461,498	-				+0.1
3,461,591	+		MPMX20_03288	0.11	-0.6
3,461,591	+		MPMX20_03288	0.11	-1.3
3,461,591	+		MPMX20_03288	0.11	+0.6
3,461,591	+		MPMX20_03288	0.11	-0.0
3,461,593	+		MPMX20_03288	0.11	+0.1
3,461,593	+		MPMX20_03288	0.11	+0.8
3,461,599	-		MPMX20_03288	0.11	-1.6
3,461,599	-		MPMX20_03288	0.11	-1.7
3,461,599	-		MPMX20_03288	0.11	-2.5
3,461,601	-		MPMX20_03288	0.11	-0.2
3,461,601	-		MPMX20_03288	0.11	-1.9
3,461,712	-		MPMX20_03288	0.16	-0.4
3,461,748	+		MPMX20_03288	0.18	-3.5
3,461,755	-		MPMX20_03288	0.18	+1.0
3,461,781	-		MPMX20_03288	0.19	-2.7
3,461,803	+		MPMX20_03288	0.20	+0.6
3,461,921	-		MPMX20_03288	0.26	-1.1
3,461,934	+		MPMX20_03288	0.26	+0.4
3,461,934	+		MPMX20_03288	0.26	-1.3
3,461,936	+		MPMX20_03288	0.26	-0.2
3,461,969	+		MPMX20_03288	0.28	+0.9
3,462,043	-		MPMX20_03288	0.31	-0.0
3,462,079	+		MPMX20_03288	0.33	-0.7
3,462,079	+		MPMX20_03288	0.33	+1.0
3,462,122	-		MPMX20_03288	0.35	-1.8
3,462,135	-		MPMX20_03288	0.35	-3.3
3,462,136	-		MPMX20_03288	0.35	+0.6
3,462,141	+		MPMX20_03288	0.35	-0.1
3,462,160	-		MPMX20_03288	0.36	-0.9
3,462,160	-		MPMX20_03288	0.36	-0.8
3,462,173	+		MPMX20_03288	0.37	-1.1
3,462,204	-		MPMX20_03288	0.38	-1.7
3,462,204	-		MPMX20_03288	0.38	-2.8
3,462,252	+		MPMX20_03288	0.40	-2.1
3,462,273	+		MPMX20_03288	0.41	-1.7
3,462,281	-		MPMX20_03288	0.42	+2.4
3,462,312	+		MPMX20_03288	0.43	-0.7
3,462,312	+		MPMX20_03288	0.43	+0.0
3,462,472	-		MPMX20_03288	0.50	-0.4
3,462,473	-		MPMX20_03288	0.50	-0.2
3,462,488	+		MPMX20_03288	0.51	-2.6
3,462,543	+		MPMX20_03288	0.54	-2.3
3,462,572	+		MPMX20_03288	0.55	+0.3
3,462,573	-		MPMX20_03288	0.55	-0.4
3,462,577	+		MPMX20_03288	0.55	-1.8
3,462,577	+		MPMX20_03288	0.55	+0.3
3,462,584	-		MPMX20_03288	0.55	-2.1
3,462,585	-		MPMX20_03288	0.55	+1.7
3,462,591	+		MPMX20_03288	0.56	-1.1
3,462,599	-		MPMX20_03288	0.56	+0.0
3,462,607	+		MPMX20_03288	0.56	+1.1
3,462,621	+		MPMX20_03288	0.57	-0.5
3,462,625	+		MPMX20_03288	0.57	+0.1
3,462,625	+		MPMX20_03288	0.57	+0.0
3,462,625	+		MPMX20_03288	0.57	-1.0
3,462,625	+		MPMX20_03288	0.57	+0.0
3,462,625	+		MPMX20_03288	0.57	-0.5
3,462,626	+		MPMX20_03288	0.57	+0.4
3,462,626	+		MPMX20_03288	0.57	-0.6
3,462,626	+		MPMX20_03288	0.57	-1.4
3,462,626	+		MPMX20_03288	0.57	-0.3
3,462,626	+		MPMX20_03288	0.57	+0.3
3,462,626	+		MPMX20_03288	0.57	-0.6
3,462,626	+		MPMX20_03288	0.57	-1.0
3,462,633	-		MPMX20_03288	0.58	-1.5
3,462,633	-		MPMX20_03288	0.58	-2.9
3,462,650	+		MPMX20_03288	0.58	+0.2
3,462,652	+		MPMX20_03288	0.58	-0.5
3,462,657	+		MPMX20_03288	0.59	+3.0
3,462,666	+		MPMX20_03288	0.59	-1.1
3,462,666	+		MPMX20_03288	0.59	+0.3
3,462,666	+		MPMX20_03288	0.59	-1.3
3,462,666	+		MPMX20_03288	0.59	-3.1
3,462,666	+		MPMX20_03288	0.59	-2.7
3,462,666	+		MPMX20_03288	0.59	-2.5
3,462,666	+		MPMX20_03288	0.59	-1.8
3,462,666	+		MPMX20_03288	0.59	-2.2
3,462,666	+		MPMX20_03288	0.59	-0.4
3,462,666	+		MPMX20_03288	0.59	-1.7
3,462,666	+		MPMX20_03288	0.59	-2.5
3,462,666	+		MPMX20_03288	0.59	-0.4
3,462,666	+		MPMX20_03288	0.59	+0.6
3,462,666	+		MPMX20_03288	0.59	-1.1
3,462,674	-		MPMX20_03288	0.59	-1.0
3,462,674	-		MPMX20_03288	0.59	+0.6
3,462,674	-		MPMX20_03288	0.59	-0.5
3,462,679	+		MPMX20_03288	0.60	+0.3
3,462,685	+		MPMX20_03288	0.60	+1.8
3,462,685	+		MPMX20_03288	0.60	-0.5
3,462,685	+		MPMX20_03288	0.60	-2.2
3,462,685	+		MPMX20_03288	0.60	-2.7
3,462,685	+		MPMX20_03288	0.60	-2.6
3,462,685	+		MPMX20_03288	0.60	-2.0
3,462,689	+		MPMX20_03288	0.60	-1.2
3,462,691	+		MPMX20_03288	0.60	+0.6
3,462,693	-		MPMX20_03288	0.60	-2.1
3,462,693	-		MPMX20_03288	0.60	-0.2
3,462,697	-		MPMX20_03288	0.60	-2.0
3,462,698	+		MPMX20_03288	0.61	-0.4
3,462,698	-		MPMX20_03288	0.61	-2.1
3,462,699	-		MPMX20_03288	0.61	-1.8
3,462,706	-		MPMX20_03288	0.61	-3.4
3,462,724	+		MPMX20_03288	0.62	-1.8
3,462,724	+		MPMX20_03288	0.62	-1.1
3,462,727	+		MPMX20_03288	0.62	-0.1
3,462,727	+		MPMX20_03288	0.62	-1.1
3,462,727	+		MPMX20_03288	0.62	-1.7
3,462,735	+		MPMX20_03288	0.62	-0.4
3,462,735	-		MPMX20_03288	0.62	-2.0
3,462,741	+		MPMX20_03288	0.62	-0.8
3,462,770	+		MPMX20_03288	0.64	-3.2
3,462,772	+		MPMX20_03288	0.64	+1.0
3,462,772	+		MPMX20_03288	0.64	-0.4
3,462,772	+		MPMX20_03288	0.64	-0.3
3,462,772	+		MPMX20_03288	0.64	-1.7
3,462,772	+		MPMX20_03288	0.64	+0.1
3,462,772	+		MPMX20_03288	0.64	-2.5
3,462,772	+		MPMX20_03288	0.64	+0.8
3,462,772	+		MPMX20_03288	0.64	+1.8
3,462,772	+		MPMX20_03288	0.64	-2.5
3,462,772	+		MPMX20_03288	0.64	-1.4
3,462,772	+		MPMX20_03288	0.64	-1.2
3,462,772	+		MPMX20_03288	0.64	+0.6
3,462,772	+		MPMX20_03288	0.64	+1.6
3,462,772	+		MPMX20_03288	0.64	+0.0
3,462,772	+		MPMX20_03288	0.64	-2.8
3,462,772	+		MPMX20_03288	0.64	+0.0
3,462,772	+		MPMX20_03288	0.64	-1.5
3,462,772	+		MPMX20_03288	0.64	-0.6
3,462,772	+		MPMX20_03288	0.64	-0.6
3,462,777	+		MPMX20_03288	0.64	-1.4
3,462,779	+		MPMX20_03288	0.64	-2.0
3,462,780	-		MPMX20_03288	0.64	-1.3
3,462,780	-		MPMX20_03288	0.64	+1.6
3,462,780	-		MPMX20_03288	0.64	+0.3
3,462,781	+		MPMX20_03288	0.64	-0.4
3,462,782	+		MPMX20_03288	0.64	-1.5
3,462,786	+		MPMX20_03288	0.64	-1.8
3,462,786	+		MPMX20_03288	0.64	-2.5
3,462,786	+		MPMX20_03288	0.64	-3.3
3,462,786	+		MPMX20_03288	0.64	-1.4
3,462,793	+		MPMX20_03288	0.65	-1.5
3,462,816	+		MPMX20_03288	0.66	-1.6
3,462,844	+		MPMX20_03288	0.67	-0.2
3,462,851	+		MPMX20_03288	0.67	-2.4
3,462,852	-		MPMX20_03288	0.67	+0.6
3,462,861	+		MPMX20_03288	0.68	+0.6
3,462,861	+		MPMX20_03288	0.68	+0.3
3,462,885	+		MPMX20_03288	0.69	-1.0
3,462,948	+		MPMX20_03288	0.72	-1.8
3,462,948	+		MPMX20_03288	0.72	-0.4
3,462,955	+		MPMX20_03288	0.72	+0.3
3,462,967	+		MPMX20_03288	0.73	-3.3
3,463,023	-		MPMX20_03288	0.75	-0.2
3,463,023	-		MPMX20_03288	0.75	-3.4
3,463,038	-		MPMX20_03288	0.76	+1.6
3,463,038	-		MPMX20_03288	0.76	-0.5
3,463,038	-		MPMX20_03288	0.76	-0.4
3,463,084	+		MPMX20_03288	0.78	-0.8
3,463,092	-		MPMX20_03288	0.78	-3.3
3,463,092	-		MPMX20_03288	0.78	-1.3
3,463,092	-		MPMX20_03288	0.78	+1.0
3,463,132	-		MPMX20_03288	0.80	-2.4
3,463,155	+		MPMX20_03288	0.81	-1.1
3,463,155	+		MPMX20_03288	0.81	-0.8
3,463,163	-		MPMX20_03288	0.81	-0.9
3,463,163	-		MPMX20_03288	0.81	-1.3
3,463,163	-		MPMX20_03288	0.81	-3.5
3,463,163	-		MPMX20_03288	0.81	-2.5
3,463,163	-		MPMX20_03288	0.81	-0.7
3,463,163	-		MPMX20_03288	0.81	-1.1
3,463,163	-		MPMX20_03288	0.81	-1.1
3,463,185	-		MPMX20_03288	0.82	-2.3
3,463,192	-		MPMX20_03288	0.83	-2.4
3,463,200	+		MPMX20_03288	0.83	-0.9
3,463,205	+		MPMX20_03288	0.83	+0.1
3,463,208	-		MPMX20_03288	0.83	+0.1
3,463,219	-		MPMX20_03288	0.84	-2.3
3,463,219	-		MPMX20_03288	0.84	-1.4
3,463,225	-		MPMX20_03288	0.84	+0.6
3,463,227	+		MPMX20_03288	0.84	-0.7
3,463,227	+		MPMX20_03288	0.84	-0.2
3,463,240	-		MPMX20_03288	0.85	+0.3
3,463,250	+		MPMX20_03288	0.85	-1.5
3,463,258	+		MPMX20_03288	0.86	+1.1
3,463,258	+		MPMX20_03288	0.86	+0.1
3,463,258	+		MPMX20_03288	0.86	+0.1
3,463,258	+		MPMX20_03288	0.86	-0.7
3,463,258	+		MPMX20_03288	0.86	-1.5
3,463,258	+		MPMX20_03288	0.86	-1.8
3,463,258	+		MPMX20_03288	0.86	-0.7
3,463,267	+		MPMX20_03288	0.86	-0.8
3,463,267	+		MPMX20_03288	0.86	+1.5
3,463,267	+		MPMX20_03288	0.86	-1.9
3,463,267	+		MPMX20_03288	0.86	+0.8
3,463,267	+		MPMX20_03288	0.86	-1.3
3,463,267	+		MPMX20_03288	0.86	-2.4
3,463,392	+				-1.2
3,463,392	+				-0.9
3,463,392	+				-1.2
3,463,398	+				-1.1
3,463,400	+				-0.8
3,463,410	+				-0.8
3,463,415	+				-1.1
3,463,425	+				+0.3
3,463,435	+				+1.1
3,463,440	+				-0.4
3,463,492	+				-2.1
3,463,522	+				+0.1
3,463,655	+				-1.5
3,463,705	-				-1.9
3,463,770	-		MPMX20_03289	0.18	-2.3
3,463,770	-		MPMX20_03289	0.18	+0.3
3,463,770	-		MPMX20_03289	0.18	-2.8
3,463,770	-		MPMX20_03289	0.18	+0.1
3,463,771	-		MPMX20_03289	0.20	-1.1
3,463,771	-		MPMX20_03289	0.20	-0.5
3,463,779	-		MPMX20_03289	0.30	-1.6
3,463,779	-		MPMX20_03289	0.30	+1.8
3,463,787	-		MPMX20_03289	0.41	+1.3
3,463,789	-		MPMX20_03289	0.43	-3.5
3,463,794	-		MPMX20_03289	0.50	-0.6
3,463,794	-		MPMX20_03289	0.50	+2.2
3,463,794	-		MPMX20_03289	0.50	+0.9
3,463,794	-		MPMX20_03289	0.50	-0.3
3,463,794	-		MPMX20_03289	0.50	-2.4
3,463,794	-		MPMX20_03289	0.50	-0.4
3,463,797	-		MPMX20_03289	0.54	+1.3
3,463,797	-		MPMX20_03289	0.54	-2.3
3,463,805	-		MPMX20_03289	0.64	-2.5
3,463,805	-		MPMX20_03289	0.64	+0.9
3,463,814	-		MPMX20_03289	0.76	+1.2
3,463,817	-		MPMX20_03289	0.80	-0.9
3,463,817	-		MPMX20_03289	0.80	+1.4
3,463,828	-				-1.8
3,463,829	-				-0.4
3,463,829	-				+1.1
3,463,829	-				+0.7
3,463,829	-				-1.3
3,463,829	-				-1.8
3,463,841	-				+0.3
3,463,841	-				-1.5
3,463,865	-				-1.4
3,463,867	-				-1.1
3,463,872	-				-1.2
3,463,872	-				+1.5
3,463,876	-				-0.7
3,463,877	-				-2.6
3,463,882	-		MPMX20_03290	0.11	-1.6
3,463,887	-		MPMX20_03290	0.17	-0.5
3,463,959	-				+1.7
3,464,080	+				-1.8
3,464,080	+				+0.2
3,464,080	+				-2.6
3,464,080	+				-0.3
3,464,085	+				+0.0
3,464,085	+				-2.1
3,464,086	+				+0.8
3,464,086	+				+1.1
3,464,086	+				-0.3
3,464,086	+				-0.6
3,464,086	+				+0.6
3,464,088	-				-1.2
3,464,088	-				+0.4
3,464,088	-				-2.5
3,464,088	-				-1.9
3,464,094	-				+0.7
3,464,094	-				-0.2
3,464,094	-				-1.2
3,464,186	+				-3.0
3,464,195	+				-1.7
3,464,195	+				-0.8
3,464,195	+				-0.2
3,464,196	-				+0.3
3,464,200	+				-0.5
3,464,203	-				-2.3
3,464,220	-		MPMX20_03291	0.15	-0.1
3,464,220	-		MPMX20_03291	0.15	-0.1
3,464,220	-		MPMX20_03291	0.15	-1.5
3,464,220	-		MPMX20_03291	0.15	-1.9
3,464,253	+		MPMX20_03291	0.24	+2.2
3,464,262	-		MPMX20_03291	0.26	-0.1
3,464,281	+		MPMX20_03291	0.31	-2.0
3,464,281	+		MPMX20_03291	0.31	-1.0
3,464,281	-		MPMX20_03291	0.31	-1.9
3,464,289	-		MPMX20_03291	0.34	-0.9
3,464,299	+		MPMX20_03291	0.36	+1.4
3,464,304	+		MPMX20_03291	0.38	+0.6
3,464,312	-		MPMX20_03291	0.40	+0.9
3,464,410	+		MPMX20_03291	0.67	+1.6
3,464,446	+		MPMX20_03291	0.77	-2.0
3,464,446	-		MPMX20_03291	0.77	-0.2
3,464,461	+		MPMX20_03291	0.81	+0.1
3,464,465	-		MPMX20_03291	0.82	-0.9
3,464,512	-				+0.0
3,464,512	-				-0.5
3,464,523	+				-1.5
3,464,531	-				-1.3
3,464,567	-				+0.4