Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02854

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
3,009,612	-		MPMX20_02853	0.43	+0.9
3,009,612	-		MPMX20_02853	0.43	-2.5
3,009,612	-		MPMX20_02853	0.43	+1.1
3,009,633	+		MPMX20_02853	0.45	-1.0
3,009,641	+		MPMX20_02853	0.45	-1.2
3,009,641	-		MPMX20_02853	0.45	-2.1
3,009,644	+		MPMX20_02853	0.45	-1.7
3,009,677	+		MPMX20_02853	0.48	+1.7
3,009,694	+		MPMX20_02853	0.49	-2.5
3,009,766	+		MPMX20_02853	0.54	+0.0
3,009,772	-		MPMX20_02853	0.55	+0.9
3,009,772	-		MPMX20_02853	0.55	+0.5
3,009,812	-		MPMX20_02853	0.57	-2.8
3,009,812	-		MPMX20_02853	0.57	-3.0
3,009,818	-		MPMX20_02853	0.58	+0.5
3,009,831	+		MPMX20_02853	0.59	-3.1
3,009,839	-		MPMX20_02853	0.59	-2.4
3,009,839	-		MPMX20_02853	0.59	-0.7
3,009,860	+		MPMX20_02853	0.61	+0.2
3,009,883	+		MPMX20_02853	0.63	-2.7
3,009,885	+		MPMX20_02853	0.63	+1.2
3,009,885	+		MPMX20_02853	0.63	+0.0
3,009,890	+		MPMX20_02853	0.63	-0.1
3,009,890	+		MPMX20_02853	0.63	+0.2
3,009,890	+		MPMX20_02853	0.63	-2.6
3,009,897	+		MPMX20_02853	0.64	+0.6
3,009,930	-		MPMX20_02853	0.66	-1.5
3,009,932	+		MPMX20_02853	0.66	+0.0
3,009,974	-		MPMX20_02853	0.69	+0.0
3,009,974	-		MPMX20_02853	0.69	-3.7
3,010,028	+		MPMX20_02853	0.73	+0.7
3,010,039	+		MPMX20_02853	0.74	-0.5
3,010,105	+		MPMX20_02853	0.78	-1.0
3,010,110	+		MPMX20_02853	0.79	+0.4
3,010,115	+		MPMX20_02853	0.79	-2.1
3,010,115	+		MPMX20_02853	0.79	-2.2
3,010,152	+		MPMX20_02853	0.82	-0.8
3,010,152	+		MPMX20_02853	0.82	-1.3
3,010,152	+		MPMX20_02853	0.82	-1.0
3,010,152	+		MPMX20_02853	0.82	+3.2
3,010,156	+		MPMX20_02853	0.82	-0.3
3,010,160	-		MPMX20_02853	0.82	+1.3
3,010,164	-		MPMX20_02853	0.83	-0.2
3,010,175	-		MPMX20_02853	0.83	-0.4
3,010,175	-		MPMX20_02853	0.83	+0.6
3,010,214	-		MPMX20_02853	0.86	-1.7
3,010,214	-		MPMX20_02853	0.86	+1.6
3,010,247	+		MPMX20_02853	0.89	-0.2
3,010,255	-		MPMX20_02853	0.89	+0.3
3,010,255	-		MPMX20_02853	0.89	-1.3
3,010,326	+				+0.0
3,010,334	-				-1.9
3,010,334	-				-0.0
3,010,357	-				+0.1
3,010,380	+				+1.0
3,010,380	+				+0.3
3,010,380	+				-1.8
3,010,380	+				-2.8
3,010,388	-				+3.3
3,010,405	+				-0.5
3,010,405	+				+0.6
3,010,405	+				+0.5
3,010,413	-				-3.2
3,010,413	-				-2.9
3,010,427	+				-2.2
3,010,427	+				+0.3
3,010,435	-				-1.5
3,010,461	+				-0.8
3,010,461	+				-1.3
3,010,461	+				+0.2
3,010,461	+				-1.5
3,010,461	+				+1.1
3,010,461	+				+1.1
3,010,461	+				-0.2
3,010,465	+				-1.5
3,010,466	+				-1.1
3,010,469	-				+1.2
3,010,469	-				+1.4
3,010,469	-				-0.7
3,010,469	-				+0.3
3,010,479	-				-2.1
3,010,649	+				-1.3
3,010,657	-				-0.4
3,010,657	-				+1.2
3,010,657	-				-0.3
3,010,657	-				+0.5
3,010,659	+				-0.5
3,010,667	+				-0.6
3,010,667	-				-3.0
3,010,675	-				+3.8
3,010,702	+		MPMX20_02854	0.11	-1.7
3,010,704	-		MPMX20_02854	0.11	-0.5
3,010,710	+		MPMX20_02854	0.12	+0.0
3,010,742	-		MPMX20_02854	0.16	+0.3
3,010,751	+		MPMX20_02854	0.17	-0.2
3,010,751	+		MPMX20_02854	0.17	-0.8
3,010,751	+		MPMX20_02854	0.17	-2.1
3,010,754	-		MPMX20_02854	0.17	-1.3
3,010,758	+		MPMX20_02854	0.18	-2.2
3,010,759	-		MPMX20_02854	0.18	-0.5
3,010,759	-		MPMX20_02854	0.18	-3.9
3,010,759	-		MPMX20_02854	0.18	-0.3
3,010,759	-		MPMX20_02854	0.18	+0.6
3,010,759	-		MPMX20_02854	0.18	-2.0
3,010,763	+		MPMX20_02854	0.18	-2.1
3,010,767	-		MPMX20_02854	0.19	-2.3
3,010,782	-		MPMX20_02854	0.21	-1.4
3,010,804	+		MPMX20_02854	0.23	-0.8
3,010,804	+		MPMX20_02854	0.23	-1.5
3,010,812	-		MPMX20_02854	0.24	-2.4
3,010,812	-		MPMX20_02854	0.24	-0.7
3,010,878	-		MPMX20_02854	0.32	-1.0
3,010,878	-		MPMX20_02854	0.32	+2.0
3,010,884	-		MPMX20_02854	0.33	-2.5
3,010,886	-		MPMX20_02854	0.33	-0.6
3,010,909	+		MPMX20_02854	0.36	-1.3
3,010,914	+		MPMX20_02854	0.36	-2.0
3,010,917	-		MPMX20_02854	0.37	+0.3
3,010,917	-		MPMX20_02854	0.37	-2.9
3,010,922	-		MPMX20_02854	0.37	-1.7
3,010,960	+		MPMX20_02854	0.42	-2.8
3,011,050	+		MPMX20_02854	0.53	-2.9
3,011,053	+		MPMX20_02854	0.53	+1.5
3,011,053	+		MPMX20_02854	0.53	-3.9
3,011,095	-		MPMX20_02854	0.58	-0.2
3,011,223	+		MPMX20_02854	0.73	-1.8
3,011,258	+		MPMX20_02854	0.78	-1.8
3,011,293	-		MPMX20_02854	0.82	-0.4
3,011,302	+		MPMX20_02854	0.83	-1.9
3,011,302	+		MPMX20_02854	0.83	+1.2
3,011,322	+		MPMX20_02854	0.85	-1.4
3,011,332	+		MPMX20_02854	0.86	-3.4
3,011,341	-		MPMX20_02854	0.87	+0.6
3,011,343	+		MPMX20_02854	0.88	+0.3
3,011,343	+		MPMX20_02854	0.88	-1.1
3,011,343	+		MPMX20_02854	0.88	-1.4
3,011,343	+		MPMX20_02854	0.88	-1.2
3,011,343	+		MPMX20_02854	0.88	-1.7
3,011,343	+		MPMX20_02854	0.88	-0.5
3,011,345	+		MPMX20_02854	0.88	-0.4
3,011,345	+		MPMX20_02854	0.88	-1.3
3,011,348	+		MPMX20_02854	0.88	-3.2
3,011,351	+		MPMX20_02854	0.89	+1.2
3,011,351	-		MPMX20_02854	0.89	+1.1
3,011,351	-		MPMX20_02854	0.89	-2.2
3,011,351	-		MPMX20_02854	0.89	-2.8
3,011,351	-		MPMX20_02854	0.89	-0.1
3,011,356	-		MPMX20_02854	0.89	-2.6
3,011,361	+		MPMX20_02854	0.90	-0.7
3,011,361	+		MPMX20_02854	0.90	+1.0
3,011,371	+				-2.9
3,011,371	+				+0.6
3,011,379	-				-1.4
3,011,379	-				+1.2
3,011,379	-				+0.0
3,011,379	-				-1.3
3,011,396	+				-0.0
3,011,397	+				-2.7
3,011,401	+				-0.2
3,011,401	+				+0.3
3,011,408	+				-2.9
3,011,409	-				+0.5
3,011,409	-				-2.5
3,011,410	+				-1.3
3,011,411	+				-3.0
3,011,414	-				-1.5
3,011,416	+				-2.2
3,011,418	-				+0.2
3,011,419	+				-1.1
3,011,419	+				-3.2
3,011,419	+				-0.7
3,011,424	+				-2.4
3,011,427	-				-3.8
3,011,432	-				+0.7
3,011,476	+				-1.4
3,011,476	+				+0.6
3,011,481	+				+1.0
3,011,483	+				+3.2
3,011,483	+				+1.0
3,011,483	+				+0.1
3,011,483	+				-0.5
3,011,483	+				-0.5
3,011,483	+				-0.5
3,011,483	+				-0.5
3,011,483	+				-1.4
3,011,483	+				-2.6
3,011,483	+				-0.5
3,011,483	+				-3.2
3,011,483	+				-1.3
3,011,483	+				-3.5
3,011,483	+				-2.0
3,011,483	+				+1.0
3,011,483	+				-0.3
3,011,483	+				-1.6
3,011,483	+				-3.0
3,011,483	+				-2.4
3,011,483	+				-1.2
3,011,483	+				-2.4
3,011,483	+				+1.0
3,011,483	+				+1.7
3,011,483	+				-2.5
3,011,483	+				-1.8
3,011,483	+				-2.4
3,011,483	+				+0.4
3,011,485	+				-3.8
3,011,489	-				+0.6
3,011,491	-				-2.3
3,011,491	-				-1.7
3,011,491	-				-2.4
3,011,491	-				+0.0
3,011,491	-				-0.8
3,011,491	-				+0.4
3,011,491	-				+1.1
3,011,491	-				-3.5
3,011,491	-				+1.1
3,011,491	-				-1.5
3,011,491	-				+0.7
3,011,491	-				-1.8
3,011,491	-				-2.2
3,011,491	-				-0.7
3,011,491	-				-2.7
3,011,491	-				-2.9
3,011,491	-				-0.9
3,011,491	-				-2.1
3,011,491	-				-0.6
3,011,491	-				-0.3
3,011,491	-				+1.9
3,011,491	-				+1.4
3,011,491	-				-0.6
3,011,491	-				-1.0
3,011,491	-				-2.9
3,011,491	-				-0.2
3,011,497	+				-3.2
3,011,497	+				+0.0
3,011,517	+				+0.3
3,011,517	+				-1.8
3,011,517	+				-1.5
3,011,517	+				+1.5
3,011,524	-				+0.3
3,011,525	-				-0.8
3,011,534	+				+0.6
3,011,549	-				-2.7
3,011,607	+				-0.3
3,011,607	+				-1.7
3,011,607	+				+0.3
3,011,607	+				+1.8
3,011,610	+				-2.7
3,011,652	+				+3.2
3,011,652	+				-0.5
3,011,680	+				+0.3
3,011,817	-				-2.0
3,011,837	+				-1.4
3,011,850	-				+0.6
3,011,851	+				-3.1
3,011,859	-				-2.1
3,011,859	-				-1.5
3,011,859	-				+0.5
3,011,870	+				+0.3
3,011,907	-				+1.9
3,011,972	-		MPMX20_02855	0.11	-0.2
3,011,996	-		MPMX20_02855	0.13	+2.0
3,012,060	+		MPMX20_02855	0.18	-1.5
3,012,073	+		MPMX20_02855	0.18	-1.3
3,012,081	-		MPMX20_02855	0.19	-0.2
3,012,158	-		MPMX20_02855	0.24	-1.0
3,012,186	+		MPMX20_02855	0.26	+0.5
3,012,186	+		MPMX20_02855	0.26	-0.6
3,012,186	+		MPMX20_02855	0.26	-3.8
3,012,208	+		MPMX20_02855	0.28	-0.8
3,012,216	-		MPMX20_02855	0.29	-0.2
3,012,222	+		MPMX20_02855	0.29	+0.3
3,012,238	-		MPMX20_02855	0.30	-0.6
3,012,244	+		MPMX20_02855	0.31	-0.5
3,012,250	+		MPMX20_02855	0.31	+0.3
3,012,252	-		MPMX20_02855	0.31	-1.4
3,012,408	-		MPMX20_02855	0.42	-3.7
3,012,425	+		MPMX20_02855	0.43	-2.4
3,012,433	+		MPMX20_02855	0.44	-0.5