Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02824

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,981,970	+				+0.7
2,981,970	+				+3.4
2,981,970	+				-1.6
2,981,980	+				-0.3
2,981,980	+				-0.0
2,981,980	+				+1.1
2,981,996	-				+1.1
2,982,079	-				+0.3
2,982,167	-		MPMX20_02823	0.19	-0.5
2,982,212	+		MPMX20_02823	0.24	+0.4
2,982,255	+		MPMX20_02823	0.29	-3.0
2,982,255	+		MPMX20_02823	0.29	-0.4
2,982,258	-		MPMX20_02823	0.30	-1.0
2,982,263	-		MPMX20_02823	0.30	-2.7
2,982,263	-		MPMX20_02823	0.30	-2.1
2,982,263	-		MPMX20_02823	0.30	+0.0
2,982,331	-		MPMX20_02823	0.38	-1.1
2,982,402	+		MPMX20_02823	0.46	-0.4
2,982,405	-		MPMX20_02823	0.46	+2.0
2,982,451	+		MPMX20_02823	0.52	-0.6
2,982,480	+		MPMX20_02823	0.55	+0.3
2,982,480	+		MPMX20_02823	0.55	-1.5
2,982,505	-		MPMX20_02823	0.58	-1.1
2,982,514	+		MPMX20_02823	0.59	+1.6
2,982,520	-		MPMX20_02823	0.60	+0.1
2,982,520	-		MPMX20_02823	0.60	+0.2
2,982,565	-		MPMX20_02823	0.65	+0.0
2,982,565	-		MPMX20_02823	0.65	+1.0
2,982,585	+		MPMX20_02823	0.67	+1.1
2,982,612	-		MPMX20_02823	0.70	-1.2
2,982,622	-		MPMX20_02823	0.71	-0.4
2,982,698	+		MPMX20_02823	0.80	+1.0
2,982,698	+		MPMX20_02823	0.80	+0.6
2,982,731	-		MPMX20_02823	0.84	+1.3
2,982,755	+		MPMX20_02823	0.86	-2.4
2,982,755	+		MPMX20_02823	0.86	-0.6
2,982,755	+		MPMX20_02823	0.86	+0.7
2,982,763	-		MPMX20_02823	0.87	-2.8
2,982,789	-				+0.9
2,982,792	+				-2.0
2,982,792	+				+0.3
2,982,797	+				-0.2
2,982,797	+				-2.6
2,982,800	-				-0.2
2,982,800	-				-3.2
2,982,800	-				-1.7
2,982,800	-				-1.7
2,982,800	-				-0.3
2,982,800	-				-1.5
2,982,800	-				-0.8
2,982,800	-				-1.8
2,982,800	-				-0.8
2,982,805	-				+1.3
2,982,807	+				-1.3
2,982,815	-				-2.2
2,982,866	+				+0.9
2,982,876	-				+0.8
2,982,903	+				-0.1
2,982,908	+				-0.1
2,982,916	+				-0.1
2,982,916	-				-1.6
2,982,943	+		MPMX20_02824	0.10	+0.4
2,982,943	+		MPMX20_02824	0.10	-0.4
2,982,980	-		MPMX20_02824	0.15	-1.2
2,983,040	-		MPMX20_02824	0.24	-0.8
2,983,086	-		MPMX20_02824	0.30	+1.0
2,983,156	+		MPMX20_02824	0.40	-0.7
2,983,164	-		MPMX20_02824	0.41	-1.4
2,983,169	-		MPMX20_02824	0.42	-1.1
2,983,175	+		MPMX20_02824	0.43	-2.2
2,983,221	-		MPMX20_02824	0.49	-0.2
2,983,228	+		MPMX20_02824	0.50	-0.2
2,983,228	+		MPMX20_02824	0.50	-0.6
2,983,231	-		MPMX20_02824	0.50	-0.7
2,983,236	-		MPMX20_02824	0.51	-2.4
2,983,236	-		MPMX20_02824	0.51	-0.8
2,983,236	-		MPMX20_02824	0.51	+0.3
2,983,246	-		MPMX20_02824	0.52	-0.8
2,983,333	+		MPMX20_02824	0.65	-0.0
2,983,333	+		MPMX20_02824	0.65	+0.1
2,983,333	+		MPMX20_02824	0.65	+1.6
2,983,333	+		MPMX20_02824	0.65	-1.1
2,983,333	+		MPMX20_02824	0.65	-1.2
2,983,341	-		MPMX20_02824	0.66	-1.0
2,983,341	-		MPMX20_02824	0.66	+0.0
2,983,341	-		MPMX20_02824	0.66	-2.2
2,983,341	-		MPMX20_02824	0.66	-1.4
2,983,341	-		MPMX20_02824	0.66	-1.4
2,983,341	-		MPMX20_02824	0.66	-1.1
2,983,376	-		MPMX20_02824	0.71	-1.2
2,983,467	+		MPMX20_02824	0.83	-0.0
2,983,468	+		MPMX20_02824	0.83	+1.0
2,983,476	-		MPMX20_02824	0.85	+1.0
2,983,476	-		MPMX20_02824	0.85	-0.8
2,983,492	+		MPMX20_02824	0.87	-0.7
2,983,492	+		MPMX20_02824	0.87	-1.2
2,983,493	+		MPMX20_02824	0.87	-0.3
2,983,494	+		MPMX20_02824	0.87	-2.8
2,983,494	+		MPMX20_02824	0.87	-2.1
2,983,521	+				+0.8
2,983,530	+				-0.7
2,983,531	+				+3.4
2,983,531	+				-0.2
2,983,538	+				+1.4
2,983,581	+				-3.2
2,983,581	+				+1.0
2,983,581	+				-2.0
2,983,581	+				+1.0
2,983,581	+				-2.2
2,983,581	+				-2.3
2,983,581	+				+0.3
2,983,581	+				+1.0
2,983,581	+				+0.4
2,983,581	+				-0.8
2,983,581	+				-1.0
2,983,581	+				-0.4
2,983,581	+				+3.2
2,983,581	+				+0.5
2,983,595	+				-0.2
2,983,612	+				-1.2
2,983,739	+		MPMX20_02825	0.23	+1.0
2,983,739	+		MPMX20_02825	0.23	-1.3
2,983,739	+		MPMX20_02825	0.23	-0.7
2,983,739	+		MPMX20_02825	0.23	-2.2
2,983,840	+		MPMX20_02825	0.70	+1.0
2,983,846	+		MPMX20_02825	0.73	-0.4
2,983,846	+		MPMX20_02825	0.73	-1.4
2,983,858	+		MPMX20_02825	0.79	-1.5
2,983,858	+		MPMX20_02825	0.79	+0.9
2,984,095	+				-2.1
2,984,106	+				-1.9
2,984,279	-		MPMX20_02826	0.42	-1.0
2,984,296	-		MPMX20_02826	0.49	+0.3
2,984,368	+		MPMX20_02826	0.82	+1.0
2,984,384	+		MPMX20_02826	0.89	-0.2
2,984,384	+		MPMX20_02826	0.89	+1.0
2,984,384	+		MPMX20_02826	0.89	+0.3
2,984,384	+		MPMX20_02826	0.89	+0.3
2,984,526	-				-0.7
2,984,526	-				-2.8
2,984,526	-				-2.8
2,984,530	-				-3.5
2,984,538	+				-0.4
2,984,538	-				-0.4
2,984,546	-				-0.7