Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02798

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,954,282	+		MPMX20_02796	0.78	+1.1
2,954,287	-		MPMX20_02796	0.78	-0.4
2,954,298	+		MPMX20_02796	0.79	-0.9
2,954,306	-		MPMX20_02796	0.80	+0.4
2,954,348	-		MPMX20_02796	0.83	-1.2
2,954,589	+				+0.6
2,954,589	+				+0.1
2,954,589	+				-2.1
2,954,589	+				+1.9
2,954,597	-				-0.6
2,954,597	-				+0.7
2,954,597	-				-0.0
2,954,597	-				-0.5
2,954,633	+				+0.1
2,954,653	-				+2.5
2,954,735	-				-0.9
2,954,758	-				-1.7
2,954,796	+				-0.8
2,954,799	-				-0.0
2,954,809	-		MPMX20_02797	0.11	-2.2
2,954,809	-		MPMX20_02797	0.11	-2.2
2,954,921	+		MPMX20_02797	0.33	-3.1
2,954,930	+		MPMX20_02797	0.35	-2.9
2,954,964	+		MPMX20_02797	0.42	-0.7
2,955,046	+		MPMX20_02797	0.58	-0.4
2,955,046	+		MPMX20_02797	0.58	+0.9
2,955,046	+		MPMX20_02797	0.58	-0.9
2,955,046	+		MPMX20_02797	0.58	-1.6
2,955,051	+		MPMX20_02797	0.59	+1.8
2,955,051	+		MPMX20_02797	0.59	-2.1
2,955,054	-		MPMX20_02797	0.60	+2.3
2,955,054	-		MPMX20_02797	0.60	-1.6
2,955,054	-		MPMX20_02797	0.60	+2.0
2,955,054	-		MPMX20_02797	0.60	+1.7
2,955,054	-		MPMX20_02797	0.60	+1.3
2,955,061	+		MPMX20_02797	0.61	-1.4
2,955,061	+		MPMX20_02797	0.61	-0.0
2,955,061	+		MPMX20_02797	0.61	-2.1
2,955,061	+		MPMX20_02797	0.61	-2.0
2,955,088	-		MPMX20_02797	0.66	+2.3
2,955,116	+		MPMX20_02797	0.72	-1.7
2,955,118	+		MPMX20_02797	0.72	-0.3
2,955,126	-		MPMX20_02797	0.74	-3.1
2,955,172	+		MPMX20_02797	0.83	+5.0
2,955,182	+		MPMX20_02797	0.85	+1.6
2,955,203	+		MPMX20_02797	0.89	+2.4
2,955,264	+				+1.5
2,955,271	-				-1.3
2,955,283	+				+0.3
2,955,283	+				+1.7
2,955,344	+				-0.2
2,955,357	-				+0.2
2,955,368	-				+3.7
2,955,368	-				+0.3
2,955,368	-				+1.3
2,955,424	+				-1.2
2,955,427	+				-0.5
2,955,427	+				+0.6
2,955,432	-				-1.5
2,955,435	-				+0.3
2,955,581	+		MPMX20_02798	0.15	-0.2
2,955,581	+		MPMX20_02798	0.15	+0.9
2,955,589	-		MPMX20_02798	0.15	+2.9
2,955,623	-		MPMX20_02798	0.17	+1.8
2,955,731	+		MPMX20_02798	0.22	-3.1
2,955,920	+		MPMX20_02798	0.32	-1.6
2,955,963	+		MPMX20_02798	0.34	+1.7
2,955,963	+		MPMX20_02798	0.34	-0.2
2,955,963	+		MPMX20_02798	0.34	-0.0
2,955,963	+		MPMX20_02798	0.34	+0.8
2,955,963	+		MPMX20_02798	0.34	-1.0
2,955,963	+		MPMX20_02798	0.34	+1.4
2,955,963	+		MPMX20_02798	0.34	+0.9
2,956,092	+		MPMX20_02798	0.40	-1.2
2,956,099	-		MPMX20_02798	0.40	+2.0
2,956,157	+		MPMX20_02798	0.43	+0.9
2,956,316	+		MPMX20_02798	0.51	-0.4
2,956,316	+		MPMX20_02798	0.51	+3.1
2,956,405	+		MPMX20_02798	0.56	-1.6
2,956,430	-		MPMX20_02798	0.57	+1.0
2,956,592	-		MPMX20_02798	0.65	-0.3
2,956,594	+		MPMX20_02798	0.65	-1.7
2,956,673	+		MPMX20_02798	0.69	-2.2
2,956,719	+		MPMX20_02798	0.71	+0.4
2,956,761	-		MPMX20_02798	0.73	-1.5
2,956,811	-		MPMX20_02798	0.75	-1.1
2,956,811	-		MPMX20_02798	0.75	-0.1
2,956,933	+		MPMX20_02798	0.81	-1.3
2,956,941	-		MPMX20_02798	0.82	-1.7
2,956,958	+		MPMX20_02798	0.83	-0.7
2,956,966	-		MPMX20_02798	0.83	+0.7
2,957,056	+		MPMX20_02798	0.88	+2.9
2,957,056	+		MPMX20_02798	0.88	-0.6
2,957,074	-		MPMX20_02798	0.88	+4.3
2,957,173	+				-0.7
2,957,185	+				+0.9
2,957,193	-				+0.4
2,957,193	-				-2.5
2,957,193	-				-0.5
2,957,193	-				+0.7
2,957,203	-				-3.1
2,957,240	-				+1.0
2,957,240	-				-0.7
2,957,253	+				-0.2
2,957,363	+				+2.8
2,957,373	+				+1.0
2,957,381	-				-1.3
2,957,451	+		MPMX20_02799	0.15	-1.8
2,957,535	+		MPMX20_02799	0.24	-0.6
2,957,555	-		MPMX20_02799	0.26	-0.2
2,957,558	+		MPMX20_02799	0.26	-1.9
2,957,566	-		MPMX20_02799	0.27	+0.3
2,957,619	+		MPMX20_02799	0.33	+0.4
2,957,623	+		MPMX20_02799	0.33	-2.8
2,957,623	-		MPMX20_02799	0.33	-1.7
2,957,631	-		MPMX20_02799	0.34	-1.9
2,957,677	+		MPMX20_02799	0.39	-1.2
2,957,677	-		MPMX20_02799	0.39	+1.0
2,957,687	-		MPMX20_02799	0.40	-3.6
2,957,700	+		MPMX20_02799	0.42	-2.6
2,957,708	-		MPMX20_02799	0.42	-1.0
2,957,708	-		MPMX20_02799	0.42	-1.0
2,957,804	+		MPMX20_02799	0.53	-2.8
2,957,889	+		MPMX20_02799	0.62	-2.6
2,957,945	+		MPMX20_02799	0.68	-2.2
2,957,959	+		MPMX20_02799	0.69	-0.1
2,958,033	+		MPMX20_02799	0.77	-0.4
2,958,106	-		MPMX20_02799	0.85	-1.0
2,958,188	+				-1.1