Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02784

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,938,926	-		MPMX20_02783	0.56	+0.2
2,939,016	+		MPMX20_02783	0.61	-1.4
2,939,035	-		MPMX20_02783	0.62	-2.4
2,939,060	-		MPMX20_02783	0.63	+0.4
2,939,112	-		MPMX20_02783	0.65	-3.0
2,939,119	-		MPMX20_02783	0.66	-0.3
2,939,131	+		MPMX20_02783	0.66	-1.0
2,939,134	-		MPMX20_02783	0.66	-1.3
2,939,162	-		MPMX20_02783	0.68	-1.1
2,939,162	-		MPMX20_02783	0.68	-0.6
2,939,239	+		MPMX20_02783	0.71	-0.5
2,939,318	+		MPMX20_02783	0.75	-1.3
2,939,318	+		MPMX20_02783	0.75	-1.7
2,939,326	-		MPMX20_02783	0.76	-1.1
2,939,424	-		MPMX20_02783	0.80	-0.1
2,939,536	-		MPMX20_02783	0.86	-1.7
2,939,607	-		MPMX20_02783	0.89	-1.9
2,939,623	+		MPMX20_02783	0.90	+0.1
2,939,623	+		MPMX20_02783	0.90	+1.2
2,939,631	-				-4.0
2,939,631	-				-0.8
2,939,646	-				-3.2
2,939,667	-				-0.2
2,939,706	-				-1.5
2,939,841	-				-1.7
2,939,913	-				-2.7
2,939,933	+				-0.1
2,939,933	+				-1.6
2,939,938	+				-1.7
2,939,940	-				+1.9
2,939,941	-		MPMX20_02784	0.10	-1.5
2,939,941	-		MPMX20_02784	0.10	-1.5
2,939,951	-		MPMX20_02784	0.11	+0.6
2,939,965	+		MPMX20_02784	0.12	-0.3
2,939,973	-		MPMX20_02784	0.13	-2.7
2,940,006	+		MPMX20_02784	0.16	-1.7
2,940,006	+		MPMX20_02784	0.16	-1.3
2,940,014	-		MPMX20_02784	0.16	-0.5
2,940,014	-		MPMX20_02784	0.16	-2.8
2,940,152	+		MPMX20_02784	0.28	-0.5
2,940,162	-		MPMX20_02784	0.29	+0.3
2,940,170	+		MPMX20_02784	0.30	+1.3
2,940,252	+		MPMX20_02784	0.37	-2.7
2,940,279	-		MPMX20_02784	0.39	-0.7
2,940,279	-		MPMX20_02784	0.39	+0.7
2,940,353	+		MPMX20_02784	0.46	-3.7
2,940,371	+		MPMX20_02784	0.47	-0.8
2,940,392	+		MPMX20_02784	0.49	-1.1
2,940,434	-		MPMX20_02784	0.53	+0.7
2,940,477	+		MPMX20_02784	0.57	-0.2
2,940,510	-		MPMX20_02784	0.60	+1.8
2,940,695	-		MPMX20_02784	0.76	-1.0
2,940,749	+		MPMX20_02784	0.80	-0.7
2,940,757	-		MPMX20_02784	0.81	+0.9
2,940,757	-		MPMX20_02784	0.81	-4.0
2,940,771	-		MPMX20_02784	0.82	-0.8
2,940,771	-		MPMX20_02784	0.82	-1.5
2,940,798	-		MPMX20_02784	0.85	-1.8
2,940,798	-		MPMX20_02784	0.85	-1.3
2,940,853	+		MPMX20_02784	0.89	-0.8
2,940,869	+				-1.7
2,940,889	-				-1.1
2,940,897	+				+0.4
2,940,897	+				-1.9
2,940,965	+				-2.4
2,941,015	+				-3.3
2,941,061	+				+2.6
2,941,061	+				+0.6
2,941,061	+				-0.0
2,941,061	+				+0.0
2,941,069	-				-0.8
2,941,211	+				-1.6
2,941,211	+				+2.9
2,941,217	+				+0.4
2,941,219	-				-3.1
2,941,230	+				-2.8
2,941,230	+				-0.6
2,941,238	+				-0.2
2,941,238	-				-1.3
2,941,238	-				+0.6
2,941,238	-				-1.6
2,941,264	-				-1.0
2,941,274	-				-0.1
2,941,283	+				-2.8
2,941,287	+				+1.5
2,941,290	-				+0.6
2,941,330	+		MPMX20_02785	0.12	+0.2
2,941,333	+		MPMX20_02785	0.13	+0.2
2,941,346	-		MPMX20_02785	0.15	-2.6
2,941,441	-		MPMX20_02785	0.29	-1.9
2,941,452	+		MPMX20_02785	0.31	-1.1
2,941,512	+		MPMX20_02785	0.40	-0.2
2,941,520	-		MPMX20_02785	0.42	-0.3
2,941,529	-		MPMX20_02785	0.43	+1.2
2,941,576	-		MPMX20_02785	0.50	-1.5
2,941,583	-		MPMX20_02785	0.51	-2.6
2,941,673	+		MPMX20_02785	0.65	+1.0
2,941,673	+		MPMX20_02785	0.65	-0.2
2,941,681	-		MPMX20_02785	0.66	+1.6
2,941,683	+		MPMX20_02785	0.67	+1.3
2,941,691	-		MPMX20_02785	0.68	-0.4
2,941,713	+		MPMX20_02785	0.71	+1.2
2,941,721	-		MPMX20_02785	0.73	-3.4
2,941,721	-		MPMX20_02785	0.73	-3.1
2,941,721	-		MPMX20_02785	0.73	+0.3
2,941,728	+		MPMX20_02785	0.74	-0.5
2,941,731	-		MPMX20_02785	0.74	-1.1
2,941,731	-		MPMX20_02785	0.74	-0.4
2,941,736	-		MPMX20_02785	0.75	+1.6
2,941,822	-		MPMX20_02785	0.88	-2.3
2,941,836	-				+0.1
2,941,964	+		MPMX20_02786	0.14	+4.9