Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02754

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,907,410	+				+0.5
2,907,517	-				-0.9
2,907,570	-				-1.0
2,907,572	+				-1.4
2,907,615	-				+0.2
2,907,643	+		MPMX20_02753	0.11	-0.1
2,907,722	-		MPMX20_02753	0.24	-1.7
2,907,807	-		MPMX20_02753	0.37	-1.5
2,907,809	+		MPMX20_02753	0.37	-1.0
2,907,838	+		MPMX20_02753	0.41	+0.5
2,907,868	-		MPMX20_02753	0.46	+0.0
2,907,964	+		MPMX20_02753	0.61	-1.0
2,908,209	-				-0.6
2,908,230	+				+0.0
2,908,246	-				+1.4
2,908,458	+				-0.2
2,908,493	-				-0.8
2,908,539	-		MPMX20_02754	0.13	+0.8
2,908,553	+		MPMX20_02754	0.14	+0.1
2,908,588	-		MPMX20_02754	0.17	-1.3
2,908,667	+		MPMX20_02754	0.23	-2.2
2,908,667	+		MPMX20_02754	0.23	-2.5
2,908,667	+		MPMX20_02754	0.23	-1.8
2,908,675	-		MPMX20_02754	0.24	-3.3
2,908,690	+		MPMX20_02754	0.25	+0.8
2,908,700	+		MPMX20_02754	0.26	-0.5
2,908,775	+		MPMX20_02754	0.33	+0.0
2,908,894	-		MPMX20_02754	0.43	+0.0
2,908,901	+		MPMX20_02754	0.43	+0.0
2,908,943	-		MPMX20_02754	0.47	-1.7
2,909,239	-		MPMX20_02754	0.72	-3.3
2,909,298	-		MPMX20_02754	0.77	-1.7
2,909,299	-		MPMX20_02754	0.77	-0.5
2,909,396	+		MPMX20_02754	0.85	-0.4
2,909,396	-		MPMX20_02754	0.85	-0.6
2,909,414	+		MPMX20_02754	0.87	-1.6
2,909,415	+		MPMX20_02754	0.87	-0.9
2,909,423	-		MPMX20_02754	0.88	-0.5
2,909,429	-		MPMX20_02754	0.88	-1.4
2,909,485	-				-1.3
2,909,785	-		MPMX20_02755	0.27	-1.5
2,909,815	-		MPMX20_02755	0.32	-2.6
2,909,965	+		MPMX20_02755	0.55	-1.7
2,909,965	+		MPMX20_02755	0.55	-2.2
2,909,965	+		MPMX20_02755	0.55	-3.2
2,909,965	+		MPMX20_02755	0.55	-1.7
2,909,965	+		MPMX20_02755	0.55	+2.4
2,909,968	-		MPMX20_02755	0.56	-1.6
2,909,973	-		MPMX20_02755	0.57	+0.3
2,909,973	-		MPMX20_02755	0.57	-2.2
2,909,973	-		MPMX20_02755	0.57	-1.2
2,909,973	-		MPMX20_02755	0.57	-2.2
2,910,117	-		MPMX20_02755	0.79	-0.2
2,910,207	-				-1.7
2,910,215	-				-1.2
2,910,295	+				-2.9
2,910,305	+				-0.9
2,910,388	+				+0.5
2,910,388	+				+0.6
2,910,388	+				-1.3
2,910,393	+				-1.6
2,910,413	+				+2.0
2,910,448	-				-1.6
2,910,561	+		MPMX20_02756	0.15	-1.7