Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02747

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,901,393	+		MPMX20_02745	0.77	-1.2
2,901,401	-		MPMX20_02745	0.78	-2.4
2,901,444	+		MPMX20_02745	0.83	-1.1
2,901,457	-		MPMX20_02745	0.84	-0.6
2,901,558	+				+0.3
2,901,558	+				-3.2
2,901,558	+				+1.1
2,901,558	+				-1.1
2,901,558	+				+1.0
2,901,566	+				+0.3
2,901,566	-				-1.4
2,901,566	-				+0.0
2,901,574	-				-1.9
2,901,624	+				-1.0
2,901,823	+				+0.5
2,901,867	-				+0.6
2,902,014	-				-1.1
2,902,054	-		MPMX20_02746	0.12	-1.2
2,902,091	+		MPMX20_02746	0.23	-1.9
2,902,166	+		MPMX20_02746	0.45	+0.2
2,902,198	-		MPMX20_02746	0.54	+0.2
2,902,218	-		MPMX20_02746	0.60	+1.2
2,902,270	-		MPMX20_02746	0.76	-2.3
2,902,287	-		MPMX20_02746	0.81	-1.0
2,902,304	-		MPMX20_02746	0.86	-2.6
2,902,307	+		MPMX20_02746	0.86	-3.3
2,902,317	+		MPMX20_02746	0.89	+0.7
2,902,383	-				-1.2
2,902,411	-				+0.6
2,902,421	+				-0.0
2,902,423	-				+0.7
2,902,464	-		MPMX20_02747	0.11	-0.4
2,902,582	-		MPMX20_02747	0.24	-1.2
2,902,582	-		MPMX20_02747	0.24	-1.0
2,902,673	+		MPMX20_02747	0.35	-3.2
2,902,700	+		MPMX20_02747	0.38	+0.6
2,902,752	+		MPMX20_02747	0.44	+0.9
2,902,770	-		MPMX20_02747	0.46	+0.0
2,902,777	+		MPMX20_02747	0.47	+0.9
2,902,779	+		MPMX20_02747	0.47	-0.6
2,902,785	-		MPMX20_02747	0.48	-1.0
2,902,785	-		MPMX20_02747	0.48	-3.2
2,902,800	+		MPMX20_02747	0.50	-0.6
2,902,847	-		MPMX20_02747	0.55	-1.6
2,902,866	+		MPMX20_02747	0.57	+0.4
2,902,866	+		MPMX20_02747	0.57	+0.7
2,902,866	+		MPMX20_02747	0.57	+0.6
2,902,874	-		MPMX20_02747	0.58	+0.0
2,902,874	-		MPMX20_02747	0.58	-1.8
2,902,874	-		MPMX20_02747	0.58	+0.3
2,902,874	-		MPMX20_02747	0.58	-0.6
2,902,876	-		MPMX20_02747	0.58	-0.9
2,902,894	+		MPMX20_02747	0.60	+2.1
2,902,894	+		MPMX20_02747	0.60	-1.0
2,902,955	+		MPMX20_02747	0.67	-1.1
2,902,964	+		MPMX20_02747	0.68	-1.5
2,902,986	-		MPMX20_02747	0.71	+0.6
2,902,986	-		MPMX20_02747	0.71	-0.2
2,902,988	-		MPMX20_02747	0.71	-1.8
2,902,997	+		MPMX20_02747	0.72	+1.4
2,903,064	-		MPMX20_02747	0.80	+0.0
2,903,088	-		MPMX20_02747	0.83	-0.2
2,903,150	+		MPMX20_02747	0.90	-1.1
2,903,159	+				-0.7
2,903,169	-				-0.3
2,903,169	-				-0.7
2,903,209	+				+1.4
2,903,214	+				+0.6
2,903,214	+				-1.1
2,903,214	+				+0.7
2,903,217	-				-1.7
2,903,217	-				+0.2
2,903,222	-				+2.6
2,903,222	-				+0.6
2,903,222	-				-1.6
2,903,227	-				-1.6
2,903,399	+		MPMX20_02748	0.43	-1.0
2,903,404	+		MPMX20_02748	0.44	+1.4
2,903,443	+		MPMX20_02748	0.55	-1.7
2,903,443	+		MPMX20_02748	0.55	-0.0
2,903,451	-		MPMX20_02748	0.57	+0.4
2,903,510	+		MPMX20_02748	0.73	+1.9
2,903,510	+		MPMX20_02748	0.73	+1.2
2,903,523	+		MPMX20_02748	0.76	-0.9
2,903,546	+		MPMX20_02748	0.82	-1.3
2,903,554	-		MPMX20_02748	0.84	-1.4
2,903,600	+				-1.1
2,903,600	+				+0.8
2,903,600	+				+0.4
2,903,608	-				-2.8
2,903,608	-				+0.5
2,903,609	-				+0.5
2,903,609	-				-1.7
2,903,656	-				-1.2
2,903,690	+				-2.5
2,903,768	+				+1.2
2,903,833	-		MPMX20_02749	0.36	-0.9
2,903,835	+		MPMX20_02749	0.37	+1.7
2,903,835	+		MPMX20_02749	0.37	+0.6
2,903,865	+		MPMX20_02749	0.50	-0.4
2,903,865	+		MPMX20_02749	0.50	+1.9
2,903,882	+		MPMX20_02749	0.58	+0.4
2,903,908	-		MPMX20_02749	0.69	-0.2
2,903,936	+		MPMX20_02749	0.81	-0.6
2,903,944	-		MPMX20_02749	0.84	-2.9
2,903,987	-				-1.1
2,903,998	-				+1.9
2,904,005	+				+1.8
2,904,062	+				-0.2
2,904,072	+				-2.9
2,904,072	+				-1.5
2,904,072	+				-2.8
2,904,080	-				-0.4
2,904,080	-				-0.2
2,904,080	-				+0.0
2,904,080	-				-1.8
2,904,080	-				-0.7
2,904,080	-				+1.1
2,904,080	-				-1.6
2,904,128	+				-2.4
2,904,138	+				-1.3
2,904,138	+				+0.3
2,904,228	-		MPMX20_02750	0.21	+0.6