Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02717

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,869,059	-		MPMX20_02714	0.87	-0.9
2,869,081	+		MPMX20_02714	0.88	-2.0
2,869,089	-		MPMX20_02714	0.89	-1.4
2,869,089	-		MPMX20_02714	0.89	+1.8
2,869,097	+		MPMX20_02714	0.89	-0.8
2,869,205	+				-1.4
2,869,243	+				-0.8
2,869,336	-				-0.9
2,869,343	-				+0.4
2,869,349	+				-2.2
2,869,349	+				+1.7
2,869,349	+				-0.2
2,869,392	-				+0.3
2,869,392	-				-2.7
2,869,408	+				-2.1
2,869,456	+				-2.2
2,869,466	+				-2.2
2,869,466	+				-1.3
2,869,466	+				-2.0
2,869,466	+				-0.7
2,869,466	+				+0.7
2,869,466	+				-1.4
2,869,466	+				-2.7
2,869,466	+				-1.0
2,869,466	+				+1.3
2,869,466	+				-0.7
2,869,474	-		MPMX20_02715	0.12	-0.3
2,869,474	-		MPMX20_02715	0.12	+1.9
2,869,474	-		MPMX20_02715	0.12	-1.2
2,869,474	-		MPMX20_02715	0.12	-0.1
2,869,474	-		MPMX20_02715	0.12	-1.7
2,869,474	-		MPMX20_02715	0.12	-1.5
2,869,474	-		MPMX20_02715	0.12	-2.7
2,869,474	-		MPMX20_02715	0.12	+0.3
2,869,481	+		MPMX20_02715	0.14	+1.3
2,869,502	-		MPMX20_02715	0.20	-2.5
2,869,534	-		MPMX20_02715	0.30	+0.4
2,869,566	+		MPMX20_02715	0.39	+0.2
2,869,566	+		MPMX20_02715	0.39	-0.1
2,869,574	-		MPMX20_02715	0.41	+0.9
2,869,574	-		MPMX20_02715	0.41	+1.1
2,869,574	-		MPMX20_02715	0.41	+0.5
2,869,610	+		MPMX20_02715	0.52	+0.4
2,869,618	-		MPMX20_02715	0.54	+1.6
2,869,682	-		MPMX20_02715	0.72	-3.1
2,869,707	-		MPMX20_02715	0.80	-0.5
2,869,709	+		MPMX20_02715	0.80	-0.4
2,869,712	+		MPMX20_02715	0.81	+2.4
2,869,712	+		MPMX20_02715	0.81	-1.7
2,869,836	-		MPMX20_02716	0.29	-0.5
2,869,899	-		MPMX20_02716	0.63	+0.9
2,869,949	+				-0.8
2,870,006	+				-0.9
2,870,008	+				+0.6
2,870,008	+				-2.2
2,870,008	+				+1.0
2,870,008	+				+1.7
2,870,013	+				+0.2
2,870,013	+				-3.1
2,870,016	-				+0.3
2,870,016	-				+2.1
2,870,016	-				+0.3
2,870,021	-				-2.3
2,870,021	-				+2.0
2,870,021	-				-2.5
2,870,091	-				+0.6
2,870,183	-		MPMX20_02717	0.12	-2.2
2,870,194	-		MPMX20_02717	0.13	-2.0
2,870,194	-		MPMX20_02717	0.13	-0.1
2,870,209	-		MPMX20_02717	0.14	-3.2
2,870,244	-		MPMX20_02717	0.17	+1.2
2,870,256	+		MPMX20_02717	0.18	-2.0
2,870,283	-		MPMX20_02717	0.20	+1.5
2,870,284	+		MPMX20_02717	0.20	+0.1
2,870,284	+		MPMX20_02717	0.20	+0.0
2,870,284	+		MPMX20_02717	0.20	-0.8
2,870,292	-		MPMX20_02717	0.20	+0.1
2,870,320	+		MPMX20_02717	0.22	-0.1
2,870,346	+		MPMX20_02717	0.24	+2.1
2,870,358	-		MPMX20_02717	0.25	-0.1
2,870,374	-		MPMX20_02717	0.26	-0.4
2,870,444	-		MPMX20_02717	0.31	-0.5
2,870,479	-		MPMX20_02717	0.34	-0.7
2,870,496	-		MPMX20_02717	0.35	+0.4
2,870,511	+		MPMX20_02717	0.36	-0.7
2,870,524	+		MPMX20_02717	0.37	+0.1
2,870,538	-		MPMX20_02717	0.38	-2.0
2,870,564	-		MPMX20_02717	0.40	-1.8
2,870,587	+		MPMX20_02717	0.42	-1.8
2,870,595	-		MPMX20_02717	0.43	+1.3
2,870,595	-		MPMX20_02717	0.43	-2.4
2,870,595	-		MPMX20_02717	0.43	+0.5
2,870,611	+		MPMX20_02717	0.44	-1.9
2,870,612	+		MPMX20_02717	0.44	-0.5
2,870,620	-		MPMX20_02717	0.44	+4.2
2,870,652	+		MPMX20_02717	0.47	-1.4
2,870,660	-		MPMX20_02717	0.47	-0.8
2,870,742	-		MPMX20_02717	0.53	-2.0
2,870,751	+		MPMX20_02717	0.54	-2.8
2,870,758	+		MPMX20_02717	0.55	+0.9
2,870,768	+		MPMX20_02717	0.55	-0.4
2,870,768	+		MPMX20_02717	0.55	-1.5
2,870,768	+		MPMX20_02717	0.55	+0.3
2,870,768	+		MPMX20_02717	0.55	-2.5
2,870,768	+		MPMX20_02717	0.55	+0.3
2,870,768	+		MPMX20_02717	0.55	+1.0
2,870,768	+		MPMX20_02717	0.55	-1.9
2,870,768	+		MPMX20_02717	0.55	-0.1
2,870,771	-		MPMX20_02717	0.56	+0.1
2,870,776	+		MPMX20_02717	0.56	-1.5
2,870,776	+		MPMX20_02717	0.56	-1.2
2,870,776	-		MPMX20_02717	0.56	+2.1
2,870,776	-		MPMX20_02717	0.56	+1.0
2,870,776	-		MPMX20_02717	0.56	-2.7
2,870,776	-		MPMX20_02717	0.56	-2.3
2,870,776	-		MPMX20_02717	0.56	+0.1
2,870,776	-		MPMX20_02717	0.56	-0.1
2,870,776	-		MPMX20_02717	0.56	+0.6
2,870,811	+		MPMX20_02717	0.58	+2.2
2,870,816	+		MPMX20_02717	0.59	+0.3
2,870,816	+		MPMX20_02717	0.59	+1.3
2,870,819	-		MPMX20_02717	0.59	-2.7
2,870,824	-		MPMX20_02717	0.59	+0.4
2,870,824	-		MPMX20_02717	0.59	-3.5
2,870,824	-		MPMX20_02717	0.59	-0.0
2,870,824	-		MPMX20_02717	0.59	+1.0
2,870,909	-		MPMX20_02717	0.66	+1.8
2,870,909	-		MPMX20_02717	0.66	+0.3
2,870,931	-		MPMX20_02717	0.67	+3.8
2,870,960	-		MPMX20_02717	0.69	-0.8
2,870,979	-		MPMX20_02717	0.71	+1.1
2,870,998	+		MPMX20_02717	0.72	+2.4
2,871,006	-		MPMX20_02717	0.73	+0.1
2,871,031	-		MPMX20_02717	0.75	+2.0
2,871,031	-		MPMX20_02717	0.75	+0.1
2,871,034	+		MPMX20_02717	0.75	+0.3
2,871,042	-		MPMX20_02717	0.76	-1.1
2,871,085	+		MPMX20_02717	0.79	-1.6
2,871,192	+		MPMX20_02717	0.87	-2.8
2,871,248	-				-0.3
2,871,276	+				+0.8
2,871,284	-				-0.6
2,871,284	-				+0.7
2,871,284	-				-2.8
2,871,368	+				+0.7
2,871,370	-				-0.5
2,871,429	-				+1.1
2,871,589	+		MPMX20_02718	0.36	+1.1
2,871,591	+		MPMX20_02718	0.36	+0.8
2,871,599	-		MPMX20_02718	0.38	-1.0
2,871,599	-		MPMX20_02718	0.38	+1.8
2,871,729	+		MPMX20_02718	0.60	-0.5
2,871,729	+		MPMX20_02718	0.60	+0.8
2,871,737	-		MPMX20_02718	0.62	-0.1
2,871,737	-		MPMX20_02718	0.62	-3.4
2,871,767	+		MPMX20_02718	0.67	-1.4
2,871,790	-		MPMX20_02718	0.71	-1.3
2,871,844	+		MPMX20_02718	0.80	-1.2
2,871,909	-				+0.3
2,872,085	-				-0.5
2,872,092	+				-0.9
2,872,094	+				-1.6
2,872,094	+				-2.6
2,872,118	+				+1.0
2,872,118	+				-1.2
2,872,126	-				+1.1
2,872,182	-				+1.2
2,872,186	+				+1.5
2,872,216	-				-2.4
2,872,227	-				-2.0
2,872,264	+				-1.9
2,872,272	-				-0.5
2,872,272	-				-0.3
2,872,287	+		MPMX20_02719	0.11	+2.8
2,872,287	-		MPMX20_02719	0.11	+0.0
2,872,294	+		MPMX20_02719	0.11	-0.5
2,872,309	-		MPMX20_02719	0.12	-0.1