Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02600

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,734,778	+				+2.3
2,734,785	+				-0.1
2,734,870	+				-2.7
2,734,899	+				-0.2
2,734,907	-				+1.5
2,734,928	+		MPMX20_02597	0.20	-2.3
2,734,928	+		MPMX20_02597	0.20	-0.9
2,734,928	+		MPMX20_02597	0.20	-0.5
2,734,928	+		MPMX20_02597	0.20	-0.8
2,734,928	+		MPMX20_02597	0.20	+1.1
2,734,936	-		MPMX20_02597	0.29	-1.6
2,735,056	-		MPMX20_02598	0.29	+1.4
2,735,056	-		MPMX20_02598	0.29	-1.3
2,735,056	-		MPMX20_02598	0.29	-1.3
2,735,056	-		MPMX20_02598	0.29	+2.7
2,735,188	-				-2.3
2,735,192	-				+1.7
2,735,239	-		MPMX20_02599	0.14	-1.0
2,735,270	+		MPMX20_02599	0.21	-2.6
2,735,298	-		MPMX20_02599	0.27	-2.9
2,735,320	-		MPMX20_02599	0.32	-1.4
2,735,389	-		MPMX20_02599	0.48	+0.6
2,735,397	+		MPMX20_02599	0.50	+0.4
2,735,430	-		MPMX20_02599	0.57	-0.5
2,735,432	-		MPMX20_02599	0.57	+0.4
2,735,437	-		MPMX20_02599	0.59	-0.1
2,735,452	-		MPMX20_02599	0.62	-1.6
2,735,463	-		MPMX20_02599	0.64	-2.1
2,735,463	-		MPMX20_02599	0.64	-3.4
2,735,473	+		MPMX20_02599	0.67	-1.3
2,735,490	+		MPMX20_02599	0.70	-0.6
2,735,508	+		MPMX20_02599	0.75	-0.1
2,735,510	+		MPMX20_02599	0.75	-2.9
2,735,511	-		MPMX20_02599	0.75	-1.2
2,735,511	-		MPMX20_02599	0.75	-3.7
2,735,511	-		MPMX20_02599	0.75	-3.8
2,735,519	+		MPMX20_02599	0.77	-0.8
2,735,553	-		MPMX20_02599	0.85	-0.3
2,735,565	+		MPMX20_02599	0.87	-1.3
2,735,573	-		MPMX20_02599	0.89	+0.1
2,735,579	+				-0.3
2,735,660	-				-1.5
2,735,661	-				-1.5
2,735,813	-				-2.4
2,735,850	+		MPMX20_02600	0.14	-0.9
2,735,853	-		MPMX20_02600	0.14	+0.4
2,735,953	-		MPMX20_02600	0.25	-0.1
2,735,956	+		MPMX20_02600	0.25	+0.4
2,735,958	+		MPMX20_02600	0.26	-0.9
2,735,959	-		MPMX20_02600	0.26	+2.3
2,735,966	+		MPMX20_02600	0.27	-2.5
2,735,967	-		MPMX20_02600	0.27	+0.4
2,735,974	-		MPMX20_02600	0.27	-2.4
2,735,976	+		MPMX20_02600	0.28	-0.7
2,735,984	-		MPMX20_02600	0.29	+1.3
2,735,991	-		MPMX20_02600	0.29	-0.8
2,736,021	+		MPMX20_02600	0.33	-1.4
2,736,021	+		MPMX20_02600	0.33	+0.1
2,736,021	+		MPMX20_02600	0.33	-1.2
2,736,021	+		MPMX20_02600	0.33	-2.0
2,736,029	-		MPMX20_02600	0.34	-1.8
2,736,029	-		MPMX20_02600	0.34	-3.6
2,736,029	-		MPMX20_02600	0.34	-3.0
2,736,029	-		MPMX20_02600	0.34	-2.2
2,736,029	-		MPMX20_02600	0.34	-1.4
2,736,029	-		MPMX20_02600	0.34	-2.7
2,736,029	-		MPMX20_02600	0.34	-0.7
2,736,029	-		MPMX20_02600	0.34	-0.3
2,736,029	-		MPMX20_02600	0.34	-2.7
2,736,053	-		MPMX20_02600	0.36	-2.8
2,736,056	+		MPMX20_02600	0.37	-1.0
2,736,093	+		MPMX20_02600	0.41	+0.9
2,736,101	-		MPMX20_02600	0.42	+0.2
2,736,130	-		MPMX20_02600	0.45	+1.6
2,736,202	+		MPMX20_02600	0.53	-1.0
2,736,231	-		MPMX20_02600	0.56	-2.6
2,736,280	+		MPMX20_02600	0.62	-3.4
2,736,290	+		MPMX20_02600	0.63	+0.3
2,736,303	-		MPMX20_02600	0.64	+1.7
2,736,362	+		MPMX20_02600	0.71	-0.4
2,736,367	+		MPMX20_02600	0.71	+0.4
2,736,368	+		MPMX20_02600	0.71	+0.7
2,736,397	+		MPMX20_02600	0.75	-0.1
2,736,402	+		MPMX20_02600	0.75	-0.7
2,736,412	+		MPMX20_02600	0.76	+0.6
2,736,458	+		MPMX20_02600	0.81	-0.8
2,736,519	+		MPMX20_02600	0.88	+0.4
2,736,541	-				-0.6
2,736,567	+				+0.6
2,736,570	-				-0.1
2,736,575	-				+0.5
2,736,601	-				+8.0
2,736,611	+				+0.8
2,736,627	-				+0.8
2,736,640	+				-0.6
2,736,648	-				-0.3
2,736,710	+				-1.5
2,736,785	-		MPMX20_02601	0.12	-1.7
2,736,877	+		MPMX20_02601	0.19	+0.7
2,736,882	+		MPMX20_02601	0.19	-2.3
2,736,885	-		MPMX20_02601	0.20	-0.8
2,736,930	-		MPMX20_02601	0.23	-0.6
2,737,003	+		MPMX20_02601	0.29	-1.8
2,737,014	+		MPMX20_02601	0.30	+1.0
2,737,014	+		MPMX20_02601	0.30	-3.0
2,737,014	+		MPMX20_02601	0.30	-0.1
2,737,014	+		MPMX20_02601	0.30	+1.0
2,737,022	-		MPMX20_02601	0.31	+0.3
2,737,022	-		MPMX20_02601	0.31	+1.0
2,737,024	+		MPMX20_02601	0.31	+0.3
2,737,029	-		MPMX20_02601	0.31	-1.2
2,737,029	-		MPMX20_02601	0.31	+0.1
2,737,105	+		MPMX20_02601	0.38	-1.7
2,737,124	+		MPMX20_02601	0.39	-2.7
2,737,124	+		MPMX20_02601	0.39	-1.3
2,737,129	+		MPMX20_02601	0.39	+1.6
2,737,129	+		MPMX20_02601	0.39	+0.8
2,737,129	+		MPMX20_02601	0.39	-2.4
2,737,129	+		MPMX20_02601	0.39	-0.8
2,737,137	-		MPMX20_02601	0.40	+0.6
2,737,137	-		MPMX20_02601	0.40	-0.6
2,737,137	-		MPMX20_02601	0.40	+1.5
2,737,137	-		MPMX20_02601	0.40	-0.8
2,737,176	+		MPMX20_02601	0.43	-2.2
2,737,183	+		MPMX20_02601	0.44	-1.4
2,737,191	-		MPMX20_02601	0.45	+2.5
2,737,205	+		MPMX20_02601	0.46	+1.5
2,737,273	+		MPMX20_02601	0.51	-1.0
2,737,281	-		MPMX20_02601	0.52	+0.6
2,737,344	-		MPMX20_02601	0.57	+0.9
2,737,346	+		MPMX20_02601	0.57	-2.8
2,737,354	+		MPMX20_02601	0.58	-2.2
2,737,387	-		MPMX20_02601	0.60	+1.0
2,737,431	+		MPMX20_02601	0.64	+1.0
2,737,439	-		MPMX20_02601	0.65	-0.6
2,737,439	-		MPMX20_02601	0.65	+1.7
2,737,457	+		MPMX20_02601	0.66	+0.2
2,737,528	+		MPMX20_02601	0.72	+0.7
2,737,528	+		MPMX20_02601	0.72	+0.0
2,737,528	+		MPMX20_02601	0.72	-0.3
2,737,536	-		MPMX20_02601	0.73	+0.9
2,737,536	-		MPMX20_02601	0.73	+0.1
2,737,536	-		MPMX20_02601	0.73	+2.0
2,737,539	+		MPMX20_02601	0.73	+0.5
2,737,561	+		MPMX20_02601	0.75	-0.2