Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02463

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,603,403	+				-1.6
2,603,436	+		MPMX20_02462	0.10	-0.5
2,603,462	+		MPMX20_02462	0.13	+0.2
2,603,499	+		MPMX20_02462	0.16	-0.3
2,603,499	+		MPMX20_02462	0.16	-3.2
2,603,499	+		MPMX20_02462	0.16	+0.9
2,603,499	+		MPMX20_02462	0.16	+2.9
2,603,507	-		MPMX20_02462	0.17	-1.4
2,603,507	-		MPMX20_02462	0.17	-0.0
2,603,507	-		MPMX20_02462	0.17	+0.4
2,603,507	-		MPMX20_02462	0.17	-2.1
2,603,507	-		MPMX20_02462	0.17	-1.5
2,603,507	-		MPMX20_02462	0.17	-0.8
2,603,507	-		MPMX20_02462	0.17	-0.2
2,603,507	-		MPMX20_02462	0.17	-1.4
2,603,551	-		MPMX20_02462	0.21	+2.9
2,603,566	-		MPMX20_02462	0.23	+0.5
2,603,566	-		MPMX20_02462	0.23	+2.9
2,603,601	+		MPMX20_02462	0.26	-2.3
2,603,609	-		MPMX20_02462	0.27	+0.1
2,603,643	-		MPMX20_02462	0.30	+0.0
2,603,674	-		MPMX20_02462	0.33	-0.9
2,603,755	+		MPMX20_02462	0.41	+0.4
2,603,849	+		MPMX20_02462	0.50	-0.4
2,603,876	+		MPMX20_02462	0.52	-1.3
2,603,884	-		MPMX20_02462	0.53	-1.0
2,603,975	-		MPMX20_02462	0.61	-0.3
2,603,982	-		MPMX20_02462	0.62	-0.3
2,604,012	-		MPMX20_02462	0.65	-0.3
2,604,070	+		MPMX20_02462	0.70	+0.7
2,604,162	+		MPMX20_02462	0.79	+0.8
2,604,244	-		MPMX20_02462	0.87	+1.9
2,604,246	+		MPMX20_02462	0.87	-0.9
2,604,246	+		MPMX20_02462	0.87	-0.1
2,604,254	-		MPMX20_02462	0.88	+0.6
2,604,259	+		MPMX20_02462	0.88	+0.0
2,604,267	-		MPMX20_02462	0.89	-0.6
2,604,267	-		MPMX20_02462	0.89	-1.5
2,604,374	-				-1.4
2,604,473	-				+0.9
2,604,483	-		MPMX20_02463	0.11	-1.2
2,604,566	-		MPMX20_02463	0.22	-1.0
2,604,577	+		MPMX20_02463	0.23	+0.4
2,604,587	+		MPMX20_02463	0.24	-2.5
2,604,665	-		MPMX20_02463	0.34	-0.1
2,604,746	+		MPMX20_02463	0.44	+0.1
2,604,754	-		MPMX20_02463	0.45	-0.9
2,604,822	+		MPMX20_02463	0.54	+0.9
2,604,846	+		MPMX20_02463	0.57	+1.7
2,604,933	-		MPMX20_02463	0.68	+0.2
2,604,937	+		MPMX20_02463	0.69	-0.5
2,604,947	+		MPMX20_02463	0.70	-2.7
2,604,947	+		MPMX20_02463	0.70	-3.0
2,604,955	-		MPMX20_02463	0.71	-2.2
2,604,955	-		MPMX20_02463	0.71	+0.5
2,604,955	-		MPMX20_02463	0.71	-0.5
2,605,048	+		MPMX20_02463	0.83	+2.3
2,605,158	+				+1.0
2,605,282	+				+0.3
2,605,287	+				-1.0
2,605,297	+				-0.0
2,605,312	+		MPMX20_02464	0.11	-0.6
2,605,320	-		MPMX20_02464	0.11	-0.4
2,605,343	-		MPMX20_02464	0.13	+2.4
2,605,453	+		MPMX20_02464	0.24	+4.8
2,605,524	+		MPMX20_02464	0.31	+1.0
2,605,524	+		MPMX20_02464	0.31	-0.0
2,605,582	-		MPMX20_02464	0.36	+0.8
2,605,611	-		MPMX20_02464	0.39	-0.7
2,605,611	-		MPMX20_02464	0.39	+0.1
2,605,622	-		MPMX20_02464	0.40	+1.1
2,605,629	+		MPMX20_02464	0.41	+0.2
2,605,694	-		MPMX20_02464	0.47	+1.0
2,605,758	+		MPMX20_02464	0.53	-0.3
2,605,818	-		MPMX20_02464	0.59	-1.1
2,605,818	-		MPMX20_02464	0.59	-1.6
2,605,824	+		MPMX20_02464	0.59	+0.7
2,605,824	+		MPMX20_02464	0.59	+1.3
2,605,926	+		MPMX20_02464	0.69	-0.5
2,605,934	-		MPMX20_02464	0.70	-0.4
2,605,952	+		MPMX20_02464	0.71	-0.5
2,605,962	+		MPMX20_02464	0.72	-1.6
2,606,003	+		MPMX20_02464	0.76	+2.5
2,606,050	+		MPMX20_02464	0.81	+0.1
2,606,069	-		MPMX20_02464	0.82	+1.5
2,606,069	-		MPMX20_02464	0.82	+0.0
2,606,069	-		MPMX20_02464	0.82	+1.1
2,606,081	+		MPMX20_02464	0.84	+0.9
2,606,081	+		MPMX20_02464	0.84	-1.1
2,606,089	-		MPMX20_02464	0.84	-0.1
2,606,142	+		MPMX20_02464	0.89	+0.7