Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02413

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,546,043	+		MPMX20_02411	0.51	+0.9
2,546,045	+		MPMX20_02411	0.51	+0.4
2,546,104	-		MPMX20_02411	0.62	-0.4
2,546,129	+		MPMX20_02411	0.66	+2.8
2,546,214	-		MPMX20_02411	0.82	-0.4
2,546,230	+		MPMX20_02411	0.85	+0.9
2,546,486	-				+0.7
2,546,504	+				-2.1
2,546,534	+				-0.3
2,546,543	-		MPMX20_02412	0.11	-0.5
2,546,550	+		MPMX20_02412	0.12	-1.5
2,546,555	+		MPMX20_02412	0.13	+0.1
2,546,558	-		MPMX20_02412	0.14	-3.2
2,546,611	+		MPMX20_02412	0.24	-0.3
2,546,611	+		MPMX20_02412	0.24	-0.9
2,546,611	+		MPMX20_02412	0.24	+0.7
2,546,638	+		MPMX20_02412	0.29	-2.4
2,546,638	+		MPMX20_02412	0.29	-1.9
2,546,643	+		MPMX20_02412	0.30	-0.4
2,546,645	+		MPMX20_02412	0.30	-0.5
2,546,646	-		MPMX20_02412	0.31	-0.4
2,546,651	-		MPMX20_02412	0.32	+0.4
2,546,704	+		MPMX20_02412	0.42	+0.7
2,546,728	-		MPMX20_02412	0.46	+0.5
2,546,733	-		MPMX20_02412	0.47	-0.4
2,546,762	+		MPMX20_02412	0.53	-0.2
2,546,762	+		MPMX20_02412	0.53	-1.3
2,546,769	+		MPMX20_02412	0.54	+0.6
2,546,777	-		MPMX20_02412	0.56	+1.1
2,546,806	-		MPMX20_02412	0.61	+0.6
2,546,866	+		MPMX20_02412	0.73	-2.4
2,546,866	+		MPMX20_02412	0.73	-2.8
2,546,874	-		MPMX20_02412	0.75	+0.6
2,546,899	+		MPMX20_02412	0.79	+0.2
2,546,946	+		MPMX20_02412	0.88	-0.8
2,546,954	-				+0.3
2,547,074	-		MPMX20_02413	0.16	+2.2
2,547,081	+		MPMX20_02413	0.18	-0.7
2,547,083	+		MPMX20_02413	0.18	+0.3
2,547,083	+		MPMX20_02413	0.18	-0.1
2,547,083	+		MPMX20_02413	0.18	-1.0
2,547,091	-		MPMX20_02413	0.20	-0.5
2,547,091	-		MPMX20_02413	0.20	-0.9
2,547,130	+		MPMX20_02413	0.28	-3.2
2,547,392	+		MPMX20_02413	0.87	-1.7
2,547,402	+		MPMX20_02413	0.89	-2.3
2,547,409	-				-1.6
2,547,428	-				-2.9
2,547,490	-		MPMX20_02414	0.10	+1.0
2,547,561	-		MPMX20_02414	0.41	+0.7
2,547,564	+		MPMX20_02414	0.42	+0.2
2,547,589	+		MPMX20_02414	0.53	-2.6
2,547,589	+		MPMX20_02414	0.53	+0.1
2,547,589	+		MPMX20_02414	0.53	-1.5
2,547,589	+		MPMX20_02414	0.53	+2.0
2,547,597	-		MPMX20_02414	0.56	-1.3
2,547,597	-		MPMX20_02414	0.56	-1.5
2,547,597	-		MPMX20_02414	0.56	+1.9
2,547,597	-		MPMX20_02414	0.56	+0.2
2,547,597	-		MPMX20_02414	0.56	+1.5
2,547,597	-		MPMX20_02414	0.56	-1.1
2,547,597	-		MPMX20_02414	0.56	-0.4
2,547,597	-		MPMX20_02414	0.56	+0.6
2,547,597	-		MPMX20_02414	0.56	-2.2
2,547,597	-		MPMX20_02414	0.56	-1.2
2,547,597	-		MPMX20_02414	0.56	-1.5
2,547,620	-		MPMX20_02414	0.66	-2.8
2,547,673	+		MPMX20_02414	0.88	+2.4
2,547,681	-				+0.5
2,547,681	-				-1.2
2,547,705	+				-0.1
2,547,705	+				+0.0
2,547,789	+				-1.2
2,547,797	-				-0.4
2,547,797	-				-0.9
2,547,797	-				+1.1
2,547,797	-				-0.4
2,547,799	+				-2.7
2,547,804	-				-1.2
2,547,832	-				-0.7
2,547,892	+				-0.2
2,547,912	+		MPMX20_02415	0.10	+0.5
2,548,007	+		MPMX20_02415	0.16	-1.8
2,548,058	+		MPMX20_02415	0.19	-0.2
2,548,066	-		MPMX20_02415	0.20	-2.7
2,548,085	+		MPMX20_02415	0.21	+0.3
2,548,085	+		MPMX20_02415	0.21	+0.1
2,548,093	-		MPMX20_02415	0.21	+0.9
2,548,093	-		MPMX20_02415	0.21	+0.5
2,548,105	-		MPMX20_02415	0.22	-3.0
2,548,116	+		MPMX20_02415	0.23	-1.5
2,548,149	+		MPMX20_02415	0.25	-0.2
2,548,196	+		MPMX20_02415	0.28	+1.2
2,548,204	-		MPMX20_02415	0.28	-0.6
2,548,217	+		MPMX20_02415	0.29	-1.2
2,548,223	+		MPMX20_02415	0.30	-0.0
2,548,225	-		MPMX20_02415	0.30	-1.1
2,548,225	-		MPMX20_02415	0.30	-1.2
2,548,236	+		MPMX20_02415	0.30	-0.3
2,548,238	+		MPMX20_02415	0.30	-1.5
2,548,244	+		MPMX20_02415	0.31	-0.7
2,548,248	+		MPMX20_02415	0.31	-0.4
2,548,248	+		MPMX20_02415	0.31	+1.0
2,548,249	+		MPMX20_02415	0.31	+0.0
2,548,252	-		MPMX20_02415	0.31	+0.9
2,548,422	-		MPMX20_02415	0.42	+0.9
2,548,422	-		MPMX20_02415	0.42	-1.1
2,548,422	-		MPMX20_02415	0.42	+2.6