Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02368

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,494,165	+		MPMX20_02366	0.49	+2.5
2,494,173	+		MPMX20_02366	0.50	-0.1
2,494,174	-		MPMX20_02366	0.50	-0.0
2,494,174	-		MPMX20_02366	0.50	-0.9
2,494,174	-		MPMX20_02366	0.50	-0.2
2,494,191	-		MPMX20_02366	0.52	-0.0
2,494,235	+		MPMX20_02366	0.57	-3.2
2,494,235	+		MPMX20_02366	0.57	-0.0
2,494,243	-		MPMX20_02366	0.58	-0.4
2,494,243	-		MPMX20_02366	0.58	-0.6
2,494,273	-		MPMX20_02366	0.62	+1.5
2,494,310	+		MPMX20_02366	0.66	+0.9
2,494,316	+		MPMX20_02366	0.67	-0.6
2,494,316	+		MPMX20_02366	0.67	+0.4
2,494,316	+		MPMX20_02366	0.67	-1.3
2,494,324	-		MPMX20_02366	0.68	+0.2
2,494,324	-		MPMX20_02366	0.68	-2.1
2,494,324	-		MPMX20_02366	0.68	-1.2
2,494,324	-		MPMX20_02366	0.68	-1.8
2,494,324	-		MPMX20_02366	0.68	+0.3
2,494,331	-		MPMX20_02366	0.68	-0.6
2,494,372	+		MPMX20_02366	0.73	+0.8
2,494,372	+		MPMX20_02366	0.73	-0.9
2,494,372	+		MPMX20_02366	0.73	+2.1
2,494,372	+		MPMX20_02366	0.73	-2.1
2,494,380	-		MPMX20_02366	0.74	+0.9
2,494,380	-		MPMX20_02366	0.74	+1.3
2,494,380	-		MPMX20_02366	0.74	-0.6
2,494,380	-		MPMX20_02366	0.74	-0.5
2,494,380	-		MPMX20_02366	0.74	-0.5
2,494,387	+		MPMX20_02366	0.75	-2.7
2,494,402	+		MPMX20_02366	0.77	-0.6
2,494,404	+		MPMX20_02366	0.77	-0.3
2,494,412	-		MPMX20_02366	0.78	-3.1
2,494,424	+		MPMX20_02366	0.79	+1.0
2,494,439	+		MPMX20_02366	0.81	+0.3
2,494,449	+		MPMX20_02366	0.82	-0.1
2,494,464	+		MPMX20_02366	0.84	-1.4
2,494,470	+		MPMX20_02366	0.85	-0.7
2,494,472	-		MPMX20_02366	0.85	-1.3
2,494,473	-		MPMX20_02366	0.85	-2.6
2,494,474	+		MPMX20_02366	0.85	+0.5
2,494,501	-		MPMX20_02366	0.88	+1.0
2,494,502	+		MPMX20_02366	0.88	+0.4
2,494,507	+		MPMX20_02366	0.89	-0.6
2,494,507	+		MPMX20_02366	0.89	-1.1
2,494,507	+		MPMX20_02366	0.89	-0.2
2,494,507	+		MPMX20_02366	0.89	+3.3
2,494,507	+		MPMX20_02366	0.89	+3.3
2,494,507	+		MPMX20_02366	0.89	-2.0
2,494,507	+		MPMX20_02366	0.89	+3.2
2,494,507	+		MPMX20_02366	0.89	+0.6
2,494,507	+		MPMX20_02366	0.89	+1.6
2,494,507	+		MPMX20_02366	0.89	-2.8
2,494,507	+		MPMX20_02366	0.89	-1.1
2,494,507	+		MPMX20_02366	0.89	+1.1
2,494,507	+		MPMX20_02366	0.89	-2.1
2,494,507	+		MPMX20_02366	0.89	-1.2
2,494,510	-		MPMX20_02366	0.89	+0.3
2,494,519	+				+2.6
2,494,529	+				-2.3
2,494,529	+				-1.2
2,494,530	+				-0.7
2,494,530	+				+1.1
2,494,530	+				-0.4
2,494,530	+				+1.6
2,494,530	+				+0.6
2,494,530	+				+3.4
2,494,530	+				-2.9
2,494,530	+				+0.3
2,494,530	+				+2.6
2,494,530	+				+0.5
2,494,535	+				-0.0
2,494,538	-				-1.1
2,494,539	+				+1.0
2,494,539	+				-1.9
2,494,540	+				+1.8
2,494,540	+				+1.5
2,494,541	+				-0.4
2,494,541	+				-2.2
2,494,541	+				+0.8
2,494,541	+				+1.1
2,494,541	+				-1.3
2,494,541	+				-1.3
2,494,541	+				-2.3
2,494,541	+				-0.5
2,494,541	+				-2.1
2,494,541	+				-0.3
2,494,541	+				-3.0
2,494,541	+				-2.8
2,494,541	+				-2.0
2,494,541	+				-1.5
2,494,541	+				-1.6
2,494,541	+				+2.3
2,494,541	+				-0.3
2,494,541	+				+1.1
2,494,541	+				+0.2
2,494,541	+				-1.5
2,494,541	+				-0.1
2,494,541	+				+1.6
2,494,541	+				-2.5
2,494,541	+				-2.2
2,494,541	+				+2.6
2,494,541	+				+0.8
2,494,541	+				+4.2
2,494,541	+				-1.0
2,494,541	+				+0.3
2,494,541	+				-1.5
2,494,541	+				-1.5
2,494,541	+				+1.4
2,494,541	+				-2.4
2,494,541	+				+0.6
2,494,541	+				+1.4
2,494,541	+				+2.0
2,494,541	+				+0.4
2,494,541	+				+1.7
2,494,541	+				-0.4
2,494,541	+				-1.0
2,494,541	+				+0.8
2,494,541	+				-1.2
2,494,541	+				-0.0
2,494,541	+				+0.5
2,494,541	+				+1.5
2,494,541	+				+0.7
2,494,541	+				-3.0
2,494,541	+				+0.3
2,494,541	+				-0.0
2,494,541	+				-1.3
2,494,541	+				-1.8
2,494,541	+				-0.1
2,494,541	+				+2.2
2,494,541	+				+1.1
2,494,541	+				-1.1
2,494,541	+				+0.3
2,494,541	+				+0.5
2,494,541	+				-0.9
2,494,541	+				+0.8
2,494,544	+				+0.6
2,494,554	+				-0.2
2,494,573	+				+1.0
2,494,573	+				-1.3
2,494,632	+				-0.5
2,494,745	-				+1.3
2,494,745	-				-1.2
2,494,805	-				-0.4
2,494,810	-				+1.0
2,494,810	-				+0.2
2,494,810	-				-0.8
2,494,810	-				-1.4
2,494,814	+				-1.3
2,494,820	-				-0.2
2,494,827	-				+1.0
2,494,827	-				+1.0
2,494,828	-				-0.4
2,494,828	-				+0.1
2,494,828	-				+0.2
2,494,828	-				-2.3
2,494,828	-				-0.4
2,494,830	-				-2.2
2,494,863	-		MPMX20_02367	0.14	-3.2
2,494,863	-		MPMX20_02367	0.14	+1.2
2,494,863	-		MPMX20_02367	0.14	-0.0
2,494,863	-		MPMX20_02367	0.14	+1.8
2,494,864	+		MPMX20_02367	0.15	-0.2
2,494,865	+		MPMX20_02367	0.15	-0.2
2,494,865	+		MPMX20_02367	0.15	+0.6
2,494,865	+		MPMX20_02367	0.15	-1.4
2,494,865	+		MPMX20_02367	0.15	-0.0
2,494,865	+		MPMX20_02367	0.15	-0.9
2,494,868	-		MPMX20_02367	0.17	-1.7
2,494,868	-		MPMX20_02367	0.17	-1.8
2,494,872	-		MPMX20_02367	0.19	-1.9
2,494,872	-		MPMX20_02367	0.19	+2.6
2,494,872	-		MPMX20_02367	0.19	+1.6
2,494,872	-		MPMX20_02367	0.19	-1.1
2,494,872	-		MPMX20_02367	0.19	+0.8
2,494,872	-		MPMX20_02367	0.19	-2.8
2,494,873	-		MPMX20_02367	0.19	-1.5
2,494,873	-		MPMX20_02367	0.19	+0.9
2,494,873	-		MPMX20_02367	0.19	-0.4
2,494,873	-		MPMX20_02367	0.19	+0.8
2,494,873	-		MPMX20_02367	0.19	+0.6
2,494,873	-		MPMX20_02367	0.19	-0.4
2,494,873	-		MPMX20_02367	0.19	-0.5
2,494,873	-		MPMX20_02367	0.19	+1.6
2,494,873	-		MPMX20_02367	0.19	+0.4
2,494,873	-		MPMX20_02367	0.19	-0.0
2,494,873	-		MPMX20_02367	0.19	-0.9
2,494,873	-		MPMX20_02367	0.19	-1.6
2,494,873	-		MPMX20_02367	0.19	+1.4
2,494,873	-		MPMX20_02367	0.19	-0.7
2,494,873	-		MPMX20_02367	0.19	-1.3
2,494,873	-		MPMX20_02367	0.19	-2.9
2,494,873	-		MPMX20_02367	0.19	-0.9
2,494,873	-		MPMX20_02367	0.19	-0.3
2,494,873	-		MPMX20_02367	0.19	-0.1
2,494,873	-		MPMX20_02367	0.19	+0.2
2,494,873	-		MPMX20_02367	0.19	+0.5
2,494,873	-		MPMX20_02367	0.19	-2.5
2,494,873	-		MPMX20_02367	0.19	+0.8
2,494,873	-		MPMX20_02367	0.19	-0.1
2,494,878	-		MPMX20_02367	0.21	+2.0
2,494,879	+		MPMX20_02367	0.22	-1.3
2,494,879	+		MPMX20_02367	0.22	-2.9
2,494,879	+		MPMX20_02367	0.22	-1.9
2,494,879	+		MPMX20_02367	0.22	-1.3
2,494,879	-		MPMX20_02367	0.22	-1.2
2,494,882	-		MPMX20_02367	0.23	+1.0
2,494,882	-		MPMX20_02367	0.23	-1.8
2,494,882	-		MPMX20_02367	0.23	+0.5
2,494,886	-		MPMX20_02367	0.25	-1.2
2,494,887	-		MPMX20_02367	0.25	-0.8
2,494,887	-		MPMX20_02367	0.25	-1.8
2,494,887	-		MPMX20_02367	0.25	-0.6
2,494,887	-		MPMX20_02367	0.25	+4.6
2,494,887	-		MPMX20_02367	0.25	-2.3
2,494,887	-		MPMX20_02367	0.25	+0.6
2,494,887	-		MPMX20_02367	0.25	-3.3
2,494,887	-		MPMX20_02367	0.25	-0.8
2,494,887	-		MPMX20_02367	0.25	-0.2
2,494,887	-		MPMX20_02367	0.25	+0.6
2,494,887	-		MPMX20_02367	0.25	-1.0
2,494,887	-		MPMX20_02367	0.25	-1.6
2,494,887	-		MPMX20_02367	0.25	-0.1
2,494,887	-		MPMX20_02367	0.25	+0.6
2,494,887	-		MPMX20_02367	0.25	+0.9
2,494,895	-		MPMX20_02367	0.29	+0.0
2,494,895	-		MPMX20_02367	0.29	-1.2
2,494,895	-		MPMX20_02367	0.29	-0.8
2,494,895	-		MPMX20_02367	0.29	+0.2
2,494,895	-		MPMX20_02367	0.29	+0.1
2,494,895	-		MPMX20_02367	0.29	+2.0
2,494,897	-		MPMX20_02367	0.30	-1.4
2,494,897	-		MPMX20_02367	0.30	+0.2
2,494,899	-		MPMX20_02367	0.31	+0.2
2,494,899	-		MPMX20_02367	0.31	+2.3
2,494,901	+		MPMX20_02367	0.32	-1.5
2,494,901	-		MPMX20_02367	0.32	+1.2
2,494,905	-		MPMX20_02367	0.34	-0.4
2,494,906	-		MPMX20_02367	0.34	+0.5
2,494,906	-		MPMX20_02367	0.34	-2.4
2,494,907	-		MPMX20_02367	0.35	-1.2
2,494,910	+		MPMX20_02367	0.36	-0.2
2,494,912	+		MPMX20_02367	0.37	+1.0
2,494,912	+		MPMX20_02367	0.37	+0.2
2,494,912	+		MPMX20_02367	0.37	-1.8
2,494,917	+		MPMX20_02367	0.39	+0.5
2,494,918	-		MPMX20_02367	0.40	+0.3
2,494,918	-		MPMX20_02367	0.40	-1.1
2,494,918	-		MPMX20_02367	0.40	+0.5
2,494,919	+		MPMX20_02367	0.40	-0.6
2,494,920	-		MPMX20_02367	0.41	+0.3
2,494,920	-		MPMX20_02367	0.41	-2.7
2,494,920	-		MPMX20_02367	0.41	-0.9
2,494,920	-		MPMX20_02367	0.41	-0.5
2,494,920	-		MPMX20_02367	0.41	-1.5
2,494,920	-		MPMX20_02367	0.41	-0.8
2,494,920	-		MPMX20_02367	0.41	-3.6
2,494,920	-		MPMX20_02367	0.41	-0.9
2,494,922	-		MPMX20_02367	0.42	-1.0
2,494,922	-		MPMX20_02367	0.42	-1.9
2,494,923	-		MPMX20_02367	0.42	+1.1
2,494,946	+		MPMX20_02367	0.53	-0.6
2,494,954	-		MPMX20_02367	0.56	-0.9
2,494,959	-		MPMX20_02367	0.59	+0.8
2,494,969	-		MPMX20_02367	0.63	-2.8
2,494,981	-		MPMX20_02367	0.69	-0.0
2,494,983	+		MPMX20_02367	0.70	-0.2
2,494,985	-		MPMX20_02367	0.71	-0.4
2,494,985	-		MPMX20_02367	0.71	+1.1
2,494,995	+		MPMX20_02367	0.75	-1.8
2,495,030	-				+0.2
2,495,040	-				-0.8
2,495,040	-				-0.9
2,495,052	-				-1.7
2,495,066	-				-1.7
2,495,071	+				-2.6
2,495,078	+				-0.5
2,495,078	+				-1.1
2,495,106	-				+1.0
2,495,120	+				+0.6
2,495,127	+				+1.0
2,495,127	+				+1.7
2,495,127	+				+1.6
2,495,135	-				+0.1
2,495,135	-				+2.6
2,495,154	-				-1.5
2,495,178	-		MPMX20_02368	0.25	-0.6
2,495,181	+		MPMX20_02368	0.28	+1.0
2,495,197	+		MPMX20_02368	0.39	+1.0
2,495,202	+		MPMX20_02368	0.43	-0.0
2,495,210	-		MPMX20_02368	0.49	-1.1
2,495,214	+		MPMX20_02368	0.51	+0.5
2,495,217	-		MPMX20_02368	0.54	-1.5
2,495,228	-		MPMX20_02368	0.62	-1.0
2,495,242	+		MPMX20_02368	0.72	-0.1
2,495,272	+				-1.6
2,495,294	+				-0.6
2,495,369	-				-0.3
2,495,380	-				-1.7
2,495,386	-				+1.7
2,495,387	+				-2.2
2,495,387	+				+0.8
2,495,387	+				-2.5
2,495,387	+				+1.2
2,495,392	+				+1.1
2,495,395	-				-0.2
2,495,397	+				-1.2
2,495,405	-				+1.7
2,495,462	-				-0.2
2,495,562	-				+0.3
2,495,562	-				+1.4
2,495,562	-				+0.9
2,495,572	+				+2.6
2,495,575	-				-0.3
2,495,580	-				-3.4
2,495,580	-				-0.2
2,495,580	-				-1.0
2,495,580	-				+2.8
2,495,580	-				+0.8
2,495,580	-				+1.2
2,495,580	-				-1.0
2,495,580	-				+2.5
2,495,602	-				-1.1
2,495,624	+				+0.8
2,495,624	+				-1.3
2,495,692	+		MPMX20_02369	0.14	-1.2
2,495,702	-		MPMX20_02369	0.14	-1.6
2,495,715	+		MPMX20_02369	0.15	-2.5
2,495,730	+		MPMX20_02369	0.16	+0.1
2,495,737	-		MPMX20_02369	0.16	-1.4
2,495,738	-		MPMX20_02369	0.17	-1.2
2,495,738	-		MPMX20_02369	0.17	-1.7
2,495,738	-		MPMX20_02369	0.17	-2.4
2,495,764	+		MPMX20_02369	0.18	-3.1
2,495,768	-		MPMX20_02369	0.18	-1.7
2,495,770	+		MPMX20_02369	0.18	-0.5
2,495,770	+		MPMX20_02369	0.18	-0.8
2,495,778	-		MPMX20_02369	0.19	+0.9
2,495,778	-		MPMX20_02369	0.19	+0.7
2,495,778	-		MPMX20_02369	0.19	-0.3
2,495,841	+		MPMX20_02369	0.23	-0.7
2,495,900	+		MPMX20_02369	0.26	-0.3
2,495,902	-		MPMX20_02369	0.26	-0.2
2,496,006	+		MPMX20_02369	0.32	+0.1
2,496,018	+		MPMX20_02369	0.33	+0.1
2,496,018	+		MPMX20_02369	0.33	-0.1
2,496,026	-		MPMX20_02369	0.34	-1.1
2,496,026	-		MPMX20_02369	0.34	+1.0
2,496,026	-		MPMX20_02369	0.34	-1.2
2,496,066	-		MPMX20_02369	0.36	-3.2
2,496,073	+		MPMX20_02369	0.36	-0.6
2,496,091	-		MPMX20_02369	0.37	-0.3
2,496,094	+		MPMX20_02369	0.38	+0.5
2,496,102	-		MPMX20_02369	0.38	-1.0
2,496,107	+		MPMX20_02369	0.38	+1.8
2,496,206	+		MPMX20_02369	0.44	+0.6
2,496,214	-		MPMX20_02369	0.45	+0.3
2,496,222	+		MPMX20_02369	0.45	+0.6