Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02295

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,406,461	-				-1.8
2,406,465	-				-1.9
2,406,544	-				+0.9
2,406,804	-				-0.3
2,406,805	-				+1.5
2,406,805	-				-1.2
2,406,808	-				-0.1
2,406,818	-				+1.5
2,406,825	-				-0.2
2,406,825	-				+0.5
2,406,835	-				-0.5
2,406,841	-				-0.8
2,406,841	-				-0.9
2,406,984	-				-1.1
2,406,997	+				-1.3
2,407,023	-				+0.9
2,407,227	-		MPMX20_02295	0.74	-1.1
2,407,251	+		MPMX20_02295	0.87	-3.5
2,407,256	+				-1.6
2,407,256	+				-1.6
2,407,258	+				-0.8
2,407,258	+				+2.5
2,407,275	+				-1.9
2,407,398	-				-4.0
2,407,398	-				+0.4
2,407,398	-				-0.1
2,407,398	-				-1.6
2,407,398	-				-1.3
2,407,398	-				-0.3
2,407,398	-				+1.5
2,407,398	-				-0.9
2,407,398	-				+0.2
2,407,398	-				-0.9
2,407,416	-				-0.1
2,407,416	-				-0.2
2,407,416	-				-3.1
2,407,416	-				-0.8
2,407,416	-				-1.1
2,407,416	-				+0.2
2,407,416	-				-0.6
2,407,430	-		MPMX20_02296	0.12	-2.2
2,407,433	-		MPMX20_02296	0.12	+0.2
2,407,462	+		MPMX20_02296	0.16	-1.9
2,407,464	+		MPMX20_02296	0.17	-1.3
2,407,464	+		MPMX20_02296	0.17	-0.9
2,407,464	+		MPMX20_02296	0.17	-1.1
2,407,464	+		MPMX20_02296	0.17	-1.8
2,407,472	-		MPMX20_02296	0.18	-0.6
2,407,472	-		MPMX20_02296	0.18	+1.1
2,407,472	-		MPMX20_02296	0.18	-0.4
2,407,472	-		MPMX20_02296	0.18	+1.5
2,407,518	-		MPMX20_02296	0.24	+1.6
2,407,526	+		MPMX20_02296	0.25	-2.0
2,407,526	+		MPMX20_02296	0.25	+0.3
2,407,526	+		MPMX20_02296	0.25	+0.6
2,407,528	-		MPMX20_02296	0.26	-0.9
2,407,534	-		MPMX20_02296	0.26	+0.7
2,407,534	-		MPMX20_02296	0.26	-1.3
2,407,544	-		MPMX20_02296	0.28	-1.5
2,407,577	+		MPMX20_02296	0.32	-0.5
2,407,585	-		MPMX20_02296	0.34	+1.2
2,407,667	-		MPMX20_02296	0.45	+0.2
2,407,706	+		MPMX20_02296	0.51	-0.4
2,407,706	+		MPMX20_02296	0.51	-0.3
2,407,706	+		MPMX20_02296	0.51	-2.0
2,407,706	+		MPMX20_02296	0.51	-1.7
2,407,706	+		MPMX20_02296	0.51	-0.8
2,407,706	+		MPMX20_02296	0.51	-2.0
2,407,706	+		MPMX20_02296	0.51	-0.1
2,407,706	+		MPMX20_02296	0.51	+2.0
2,407,714	-		MPMX20_02296	0.52	-1.1
2,407,714	-		MPMX20_02296	0.52	-2.7
2,407,714	-		MPMX20_02296	0.52	+0.1
2,407,720	-		MPMX20_02296	0.53	-1.0
2,407,772	-		MPMX20_02296	0.60	-2.0
2,407,822	+		MPMX20_02296	0.67	+1.0
2,407,832	+		MPMX20_02296	0.69	-0.8
2,407,832	+		MPMX20_02296	0.69	+1.9
2,407,832	+		MPMX20_02296	0.69	+0.9
2,407,837	+		MPMX20_02296	0.69	-0.1
2,407,837	+		MPMX20_02296	0.69	-0.6
2,407,840	-		MPMX20_02296	0.70	+2.3
2,407,840	-		MPMX20_02296	0.70	-1.7
2,407,841	+		MPMX20_02296	0.70	+0.7
2,407,841	+		MPMX20_02296	0.70	-1.0
2,407,845	-		MPMX20_02296	0.70	-1.4
2,407,915	+		MPMX20_02296	0.80	-2.8
2,407,915	+		MPMX20_02296	0.80	-0.3
2,407,915	+		MPMX20_02296	0.80	+0.6
2,407,923	-		MPMX20_02296	0.81	-2.5
2,407,930	-		MPMX20_02296	0.82	-1.3
2,407,938	-		MPMX20_02296	0.83	-0.3
2,407,940	-		MPMX20_02296	0.84	-1.0
2,407,953	+		MPMX20_02296	0.86	-1.4
2,407,970	+		MPMX20_02296	0.88	+2.2
2,407,998	+				-1.3
2,407,998	+				-0.9
2,407,998	+				-0.7
2,407,998	+				-1.6
2,407,998	+				+0.5
2,408,000	+				-2.4
2,408,000	+				-3.1
2,408,000	+				+0.4
2,408,000	+				-0.9
2,408,000	+				-0.8
2,408,000	+				+1.7
2,408,000	+				-0.3
2,408,006	-				+0.5
2,408,006	-				+0.6
2,408,006	-				-1.8
2,408,006	-				-1.8
2,408,006	-				+0.4
2,408,006	-				+3.1
2,408,006	-				-1.3
2,408,008	-				+0.6
2,408,008	-				+1.7
2,408,008	-				+0.7
2,408,008	-				-2.0
2,408,008	-				-0.4
2,408,008	-				-2.7
2,408,017	+				-0.8
2,408,025	-				+1.1
2,408,025	-				+1.0
2,408,035	+				+0.1
2,408,035	+				-0.6
2,408,035	+				+3.1
2,408,043	-				-2.6
2,408,043	-				+1.0
2,408,043	-				-0.9
2,408,043	-				-2.4
2,408,043	-				+0.8
2,408,043	-				-1.5
2,408,110	-		MPMX20_02297	0.10	-1.3
2,408,116	+		MPMX20_02297	0.11	-2.7
2,408,116	+		MPMX20_02297	0.11	-0.6
2,408,116	+		MPMX20_02297	0.11	+0.2
2,408,124	-		MPMX20_02297	0.13	-0.3
2,408,124	-		MPMX20_02297	0.13	-2.4
2,408,124	-		MPMX20_02297	0.13	-0.9
2,408,124	-		MPMX20_02297	0.13	-2.9
2,408,137	+		MPMX20_02297	0.15	-0.3
2,408,154	+		MPMX20_02297	0.18	+5.1
2,408,168	-		MPMX20_02297	0.20	-3.2
2,408,209	+		MPMX20_02297	0.27	+0.8
2,408,214	+		MPMX20_02297	0.28	+2.0
2,408,258	+		MPMX20_02297	0.36	-1.5
2,408,258	+		MPMX20_02297	0.36	+0.5
2,408,258	+		MPMX20_02297	0.36	-2.5
2,408,266	-		MPMX20_02297	0.37	+0.2
2,408,266	-		MPMX20_02297	0.37	+0.6