Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02254

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,366,004	-		MPMX20_02252	0.84	-1.7
2,366,045	+		MPMX20_02252	0.87	+2.7
2,366,183	-				+0.1
2,366,252	-				-0.3
2,366,314	+		MPMX20_02253	0.17	+0.3
2,366,322	-		MPMX20_02253	0.18	-0.2
2,366,335	-		MPMX20_02253	0.19	-0.2
2,366,358	-		MPMX20_02253	0.22	-3.2
2,366,420	+		MPMX20_02253	0.30	-0.6
2,366,595	-		MPMX20_02253	0.52	-1.4
2,366,624	-		MPMX20_02253	0.56	-2.8
2,366,624	-		MPMX20_02253	0.56	+2.5
2,366,632	+		MPMX20_02253	0.57	-0.0
2,366,677	+		MPMX20_02253	0.62	-0.5
2,366,685	-		MPMX20_02253	0.63	-1.7
2,366,688	+		MPMX20_02253	0.64	-2.5
2,366,688	+		MPMX20_02253	0.64	-0.9
2,366,696	-		MPMX20_02253	0.65	+1.8
2,366,801	-		MPMX20_02253	0.78	-0.2
2,366,801	-		MPMX20_02253	0.78	-0.3
2,366,801	-		MPMX20_02253	0.78	+0.7
2,366,803	+		MPMX20_02253	0.78	+0.6
2,366,803	+		MPMX20_02253	0.78	+0.7
2,366,803	+		MPMX20_02253	0.78	+0.4
2,366,803	+		MPMX20_02253	0.78	+0.2
2,366,803	+		MPMX20_02253	0.78	-0.3
2,366,811	-		MPMX20_02253	0.79	+1.0
2,366,837	-		MPMX20_02253	0.82	+1.5
2,366,919	+				-1.1
2,366,928	+				-0.3
2,366,950	+				-0.1
2,366,974	+				+0.9
2,366,974	+				-2.6
2,367,003	+				-0.3
2,367,027	+				+2.5
2,367,123	-		MPMX20_02254	0.19	-0.1
2,367,123	-		MPMX20_02254	0.19	-1.4
2,367,131	+		MPMX20_02254	0.21	-0.8
2,367,187	+		MPMX20_02254	0.29	-0.5
2,367,220	+		MPMX20_02254	0.33	+1.5
2,367,271	-		MPMX20_02254	0.41	-0.2
2,367,324	-		MPMX20_02254	0.48	-0.7
2,367,514	+		MPMX20_02254	0.75	-0.9
2,367,576	+		MPMX20_02254	0.84	+0.1
2,367,587	+		MPMX20_02254	0.86	-0.4
2,367,587	+		MPMX20_02254	0.86	-2.5
2,367,628	+				-0.5
2,367,635	-				-2.0
2,367,637	+				-0.9
2,367,645	-				-2.5
2,367,782	+				-2.0
2,367,790	+				+0.8
2,367,790	-				+2.4
2,367,793	-				+0.1
2,367,797	+				+0.4
2,367,798	-				+0.4
2,367,845	-		MPMX20_02255	0.17	-0.8
2,367,901	+		MPMX20_02255	0.26	+1.8
2,367,902	+		MPMX20_02255	0.26	-3.1
2,368,008	+		MPMX20_02255	0.42	+0.3
2,368,031	-		MPMX20_02255	0.46	+2.1
2,368,083	+		MPMX20_02255	0.54	-0.5
2,368,089	+		MPMX20_02255	0.55	-1.2
2,368,190	-		MPMX20_02255	0.71	-3.4
2,368,268	+		MPMX20_02255	0.83	+0.0
2,368,292	+		MPMX20_02255	0.87	-1.8
2,368,350	+				-0.4
2,368,391	-				+0.3
2,368,454	+				+0.9
2,368,528	-				-2.7
2,368,547	+		MPMX20_02256	0.10	+1.5
2,368,547	+		MPMX20_02256	0.10	-1.0
2,368,547	+		MPMX20_02256	0.10	+0.8
2,368,555	-		MPMX20_02256	0.11	-0.4
2,368,652	+		MPMX20_02256	0.19	-1.1
2,368,678	+		MPMX20_02256	0.21	+0.8