Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02182

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,269,969	+				-1.5
2,269,976	+		MPMX20_02180	0.10	-0.6
2,269,976	+		MPMX20_02180	0.10	-1.6
2,269,976	+		MPMX20_02180	0.10	-0.6
2,269,976	+		MPMX20_02180	0.10	-0.6
2,269,984	-		MPMX20_02180	0.12	+0.1
2,269,984	-		MPMX20_02180	0.12	+1.5
2,269,984	-		MPMX20_02180	0.12	-2.7
2,270,001	+		MPMX20_02180	0.15	+0.4
2,270,118	+		MPMX20_02180	0.37	-3.0
2,270,223	+		MPMX20_02180	0.57	-2.7
2,270,245	-		MPMX20_02180	0.61	+0.6
2,270,255	-		MPMX20_02180	0.63	-0.1
2,270,286	+		MPMX20_02180	0.69	+0.6
2,270,301	+		MPMX20_02180	0.72	-0.9
2,270,302	-		MPMX20_02180	0.72	-2.1
2,270,309	-		MPMX20_02180	0.73	-3.6
2,270,359	+		MPMX20_02180	0.83	+0.4
2,270,480	+				-2.2
2,270,488	-				+1.0
2,270,574	-		MPMX20_02181	0.26	+1.6
2,270,587	-		MPMX20_02181	0.29	-3.0
2,270,683	+		MPMX20_02181	0.49	-1.1
2,270,750	+		MPMX20_02181	0.63	+0.1
2,270,750	+		MPMX20_02181	0.63	-1.6
2,270,758	-		MPMX20_02181	0.65	-1.2
2,270,802	-		MPMX20_02181	0.75	-0.6
2,270,838	+		MPMX20_02181	0.82	+1.8
2,270,839	+		MPMX20_02181	0.82	-2.2
2,270,872	-		MPMX20_02181	0.89	+2.0
2,270,884	+				-0.6
2,270,939	+				-0.4
2,270,947	-				-1.0
2,271,049	+		MPMX20_02182	0.28	+0.6
2,271,049	+		MPMX20_02182	0.28	-1.9
2,271,049	+		MPMX20_02182	0.28	+5.2
2,271,057	-		MPMX20_02182	0.30	-0.0
2,271,081	+		MPMX20_02182	0.36	-0.7
2,271,213	+		MPMX20_02182	0.66	-2.0
2,271,283	-		MPMX20_02182	0.82	-2.9
2,271,300	-		MPMX20_02182	0.86	+0.7
2,271,393	+				+0.3
2,271,398	+				-0.1
2,271,401	-				+0.5
2,271,401	-				-1.1
2,271,555	+		MPMX20_02183	0.10	-0.6
2,271,591	+		MPMX20_02183	0.14	+0.0
2,271,597	+		MPMX20_02183	0.15	-2.2
2,271,698	+		MPMX20_02183	0.26	+0.8
2,271,698	+		MPMX20_02183	0.26	+1.7
2,271,706	-		MPMX20_02183	0.26	-0.7
2,271,781	+		MPMX20_02183	0.34	-0.4
2,271,784	-		MPMX20_02183	0.35	+3.6
2,271,784	-		MPMX20_02183	0.35	-1.0
2,271,784	-		MPMX20_02183	0.35	+0.1
2,271,784	-		MPMX20_02183	0.35	+1.5
2,271,784	-		MPMX20_02183	0.35	+0.6
2,271,804	-		MPMX20_02183	0.37	-0.6
2,271,804	-		MPMX20_02183	0.37	-1.4
2,271,847	-		MPMX20_02183	0.41	+0.6
2,271,965	-		MPMX20_02183	0.54	-2.4
2,272,107	-		MPMX20_02183	0.69	+2.8
2,272,155	+		MPMX20_02183	0.74	-0.8
2,272,178	-		MPMX20_02183	0.77	+2.9
2,272,226	+		MPMX20_02183	0.82	+0.4
2,272,234	-		MPMX20_02183	0.83	+0.9
2,272,234	-		MPMX20_02183	0.83	+0.6
2,272,236	+		MPMX20_02183	0.83	-1.5
2,272,252	+		MPMX20_02183	0.85	+0.7
2,272,260	-		MPMX20_02183	0.86	+1.1
2,272,287	-		MPMX20_02183	0.89	-0.7