Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02111

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,202,361	-		MPMX20_02109	0.10	-1.9
2,202,361	-		MPMX20_02109	0.10	+1.2
2,202,363	-		MPMX20_02109	0.10	+0.6
2,202,378	-		MPMX20_02109	0.13	-1.1
2,202,378	-		MPMX20_02109	0.13	-3.6
2,202,383	-		MPMX20_02109	0.14	-0.8
2,202,419	-		MPMX20_02109	0.20	-1.6
2,202,427	+		MPMX20_02109	0.21	-0.7
2,202,448	+		MPMX20_02109	0.25	-1.2
2,202,486	+		MPMX20_02109	0.32	-1.9
2,202,496	+		MPMX20_02109	0.33	-0.6
2,202,583	+		MPMX20_02109	0.48	+1.3
2,202,591	-		MPMX20_02109	0.50	-0.3
2,202,662	-		MPMX20_02109	0.62	+0.3
2,202,706	-		MPMX20_02109	0.70	-1.5
2,202,811	+		MPMX20_02109	0.88	-0.5
2,202,833	+				+1.5
2,202,841	-				-3.5
2,202,841	-				-0.7
2,202,841	-				+0.1
2,202,923	+				+1.8
2,202,953	-				-2.1
2,203,046	-				-2.9
2,203,086	+		MPMX20_02110	0.15	-1.8
2,203,092	+		MPMX20_02110	0.21	+0.8
2,203,093	+		MPMX20_02110	0.22	+0.3
2,203,093	+		MPMX20_02110	0.22	+0.7
2,203,093	+		MPMX20_02110	0.22	-0.9
2,203,093	+		MPMX20_02110	0.22	-3.0
2,203,094	-		MPMX20_02110	0.23	-0.5
2,203,100	-		MPMX20_02110	0.29	-1.6
2,203,100	-		MPMX20_02110	0.29	-1.2
2,203,101	-		MPMX20_02110	0.30	+0.6
2,203,101	-		MPMX20_02110	0.30	-0.2
2,203,111	+		MPMX20_02110	0.41	-3.1
2,203,111	+		MPMX20_02110	0.41	-1.9
2,203,111	+		MPMX20_02110	0.41	+1.1
2,203,113	+		MPMX20_02110	0.43	+0.6
2,203,113	+		MPMX20_02110	0.43	-1.7
2,203,119	-		MPMX20_02110	0.49	-0.7
2,203,119	-		MPMX20_02110	0.49	-2.6
2,203,121	-		MPMX20_02110	0.51	-1.7
2,203,126	-		MPMX20_02110	0.56	-0.2
2,203,155	-		MPMX20_02110	0.86	-3.2
2,203,162	+				-2.4
2,203,169	+				-0.7
2,203,169	+				-0.9
2,203,169	+				+0.3
2,203,169	+				+0.6
2,203,169	+				-2.0
2,203,169	+				+1.8
2,203,188	-				-0.2
2,203,194	+				+0.3
2,203,214	+				-1.2
2,203,239	+				-1.5
2,203,317	+				-0.7
2,203,382	-		MPMX20_02111	0.13	+1.1
2,203,382	-		MPMX20_02111	0.13	-0.5
2,203,384	-		MPMX20_02111	0.13	-0.8
2,203,384	-		MPMX20_02111	0.13	-0.1
2,203,384	-		MPMX20_02111	0.13	+2.7
2,203,392	-		MPMX20_02111	0.15	-0.5
2,203,392	-		MPMX20_02111	0.15	+0.3
2,203,392	-		MPMX20_02111	0.15	+3.8
2,203,392	-		MPMX20_02111	0.15	-2.5
2,203,396	+		MPMX20_02111	0.16	-0.5
2,203,397	-		MPMX20_02111	0.16	-0.8
2,203,403	+		MPMX20_02111	0.17	+1.1
2,203,404	-		MPMX20_02111	0.17	-0.3
2,203,408	+		MPMX20_02111	0.18	-2.6
2,203,408	+		MPMX20_02111	0.18	-2.2
2,203,408	+		MPMX20_02111	0.18	-0.9
2,203,408	+		MPMX20_02111	0.18	+0.1
2,203,408	+		MPMX20_02111	0.18	+0.3
2,203,416	-		MPMX20_02111	0.19	-2.2
2,203,416	-		MPMX20_02111	0.19	-2.5
2,203,423	-		MPMX20_02111	0.20	-0.1
2,203,423	-		MPMX20_02111	0.20	-0.6
2,203,444	-		MPMX20_02111	0.24	-1.3
2,203,447	+		MPMX20_02111	0.24	-0.5
2,203,460	-		MPMX20_02111	0.27	-1.4
2,203,466	+		MPMX20_02111	0.28	+0.1
2,203,466	+		MPMX20_02111	0.28	-1.4
2,203,474	-		MPMX20_02111	0.29	-1.0
2,203,509	-		MPMX20_02111	0.35	-2.1
2,203,567	-		MPMX20_02111	0.45	-1.5
2,203,567	-		MPMX20_02111	0.45	+1.7
2,203,574	+		MPMX20_02111	0.46	+0.1
2,203,574	+		MPMX20_02111	0.46	-0.3
2,203,582	-		MPMX20_02111	0.48	-0.3
2,203,582	-		MPMX20_02111	0.48	-1.0
2,203,582	-		MPMX20_02111	0.48	-0.5
2,203,582	-		MPMX20_02111	0.48	-0.8
2,203,584	+		MPMX20_02111	0.48	-0.1
2,203,590	-		MPMX20_02111	0.49	-0.9
2,203,591	+		MPMX20_02111	0.49	+0.1
2,203,592	-		MPMX20_02111	0.49	-1.6
2,203,592	-		MPMX20_02111	0.49	+1.1
2,203,592	-		MPMX20_02111	0.49	+0.1
2,203,592	-		MPMX20_02111	0.49	-0.3
2,203,592	-		MPMX20_02111	0.49	-0.1
2,203,598	-		MPMX20_02111	0.50	+0.3
2,203,599	-		MPMX20_02111	0.51	+0.1
2,203,599	-		MPMX20_02111	0.51	-0.7
2,203,619	-		MPMX20_02111	0.54	-1.5
2,203,623	+		MPMX20_02111	0.55	-0.1
2,203,631	-		MPMX20_02111	0.56	-1.0
2,203,672	+		MPMX20_02111	0.63	-0.1
2,203,704	-		MPMX20_02111	0.69	+0.1
2,203,764	+		MPMX20_02111	0.79	+0.7
2,203,772	-		MPMX20_02111	0.80	-0.9
2,203,772	-		MPMX20_02111	0.80	+1.7
2,203,772	-		MPMX20_02111	0.80	-2.2
2,203,772	-		MPMX20_02111	0.80	+0.6
2,203,772	-		MPMX20_02111	0.80	-0.7
2,203,787	+		MPMX20_02111	0.83	-2.5
2,203,787	+		MPMX20_02111	0.83	-2.2
2,203,787	+		MPMX20_02111	0.83	-1.2
2,203,815	-		MPMX20_02111	0.88	-0.7
2,203,832	-				-0.1
2,203,832	-				-0.9
2,203,832	-				-0.1
2,203,832	-				+0.6
2,203,832	-				-1.3
2,203,840	-				-0.8
2,203,840	-				-3.0
2,203,840	-				-1.3
2,203,840	-				-1.3
2,203,840	-				-1.7
2,203,840	-				-0.8
2,203,840	-				-1.1
2,203,840	-				+0.1
2,203,842	-				+0.8
2,203,842	-				+2.7
2,203,842	-				-1.2
2,203,842	-				+0.3
2,203,842	-				+0.1
2,203,883	+				-0.3
2,203,901	+				-0.9
2,203,903	+				-0.3
2,203,903	+				-1.1
2,203,909	-				-0.3
2,203,945	+				-0.2
2,203,953	-				-0.1
2,203,953	-				+0.7
2,203,953	-				-1.1
2,203,963	+				+0.3
2,204,010	+				-0.9
2,204,010	+				-0.3
2,204,010	+				+0.7
2,204,018	-				-2.5
2,204,018	-				-2.8
2,204,018	-				-0.7
2,204,024	+				-2.0
2,204,028	-				-1.0
2,204,028	-				-1.9
2,204,028	-				+1.2
2,204,029	-				-1.6
2,204,038	+				-0.1
2,204,038	+				+0.8
2,204,043	+				-2.9
2,204,043	+				-1.3
2,204,043	+				-1.7
2,204,043	+				+2.7
2,204,043	+				-2.6
2,204,050	+				-1.7
2,204,051	-				-0.4
2,204,051	-				+0.1
2,204,060	+				-1.4
2,204,060	+				-0.9
2,204,060	+				-1.4
2,204,060	+				-0.7
2,204,060	+				-0.4
2,204,060	+				-0.7
2,204,060	+				-0.1
2,204,060	+				-0.1
2,204,060	+				-0.9
2,204,060	+				-1.9
2,204,060	+				-0.7
2,204,060	+				-2.4
2,204,068	-				-1.6
2,204,111	+				-0.5
2,204,111	+				-1.1
2,204,111	+				-2.2
2,204,111	+				-1.3
2,204,116	+				-1.1
2,204,116	+				+1.1
2,204,117	+				-1.8
2,204,119	-				-0.5
2,204,119	-				-2.1
2,204,119	-				-0.5
2,204,119	-				-1.2
2,204,119	-				+0.3
2,204,119	-				-0.2
2,204,122	+				-1.8
2,204,127	+				+0.3
2,204,127	+				-1.9
2,204,127	+				-0.8
2,204,127	+				-0.7
2,204,127	+				-0.8
2,204,127	+				+0.3
2,204,127	+				-2.1
2,204,127	+				+1.3
2,204,132	+				-2.2
2,204,132	+				-0.8
2,204,132	+				-1.4
2,204,135	-				-0.7
2,204,135	-				-2.1
2,204,135	-				+0.6
2,204,135	-				+0.6
2,204,137	+				-2.7
2,204,137	+				+0.6
2,204,137	+				-0.7
2,204,137	+				-1.1
2,204,140	-				-1.7
2,204,140	-				-2.1
2,204,145	-				-0.4
2,204,145	-				-2.5
2,204,145	-				-0.5
2,204,179	-				-0.5
2,204,205	-				+1.5
2,204,216	-				-1.3
2,204,259	-				-1.9
2,204,259	-				+0.2
2,204,259	-				-0.7
2,204,264	+				-0.7
2,204,264	-				-0.7
2,204,267	-				-1.2
2,204,267	-				-1.2
2,204,276	-				-0.9
2,204,291	+				+1.6
2,204,321	-				-2.0
2,204,321	-				-1.2
2,204,321	-				-2.5
2,204,347	-				-2.1
2,204,347	-				-0.4
2,204,347	-				-0.3
2,204,347	-				-1.7
2,204,347	-				-1.9
2,204,352	-				-2.0
2,204,359	-				-1.7
2,204,359	-				-0.9
2,204,364	-				-1.0
2,204,364	-				+1.1
2,204,364	-				+2.1
2,204,364	-				-2.5
2,204,364	-				-0.8
2,204,370	+		MPMX20_02112	0.11	-0.4
2,204,370	+		MPMX20_02112	0.11	-0.4
2,204,370	+		MPMX20_02112	0.11	-0.4
2,204,378	-		MPMX20_02112	0.13	-0.4
2,204,378	-		MPMX20_02112	0.13	-0.9
2,204,378	-		MPMX20_02112	0.13	-0.7
2,204,378	-		MPMX20_02112	0.13	+1.2
2,204,378	-		MPMX20_02112	0.13	-1.6
2,204,378	-		MPMX20_02112	0.13	+0.6
2,204,379	-		MPMX20_02112	0.13	-0.9
2,204,379	-		MPMX20_02112	0.13	-2.1
2,204,379	-		MPMX20_02112	0.13	-0.8
2,204,379	-		MPMX20_02112	0.13	-0.3
2,204,380	+		MPMX20_02112	0.13	-0.2
2,204,383	-		MPMX20_02112	0.14	-0.2
2,204,388	-		MPMX20_02112	0.15	-1.2
2,204,388	-		MPMX20_02112	0.15	+0.3
2,204,388	-		MPMX20_02112	0.15	-0.7
2,204,388	-		MPMX20_02112	0.15	-2.5
2,204,388	-		MPMX20_02112	0.15	-2.5
2,204,388	-		MPMX20_02112	0.15	+0.1
2,204,388	-		MPMX20_02112	0.15	-0.7
2,204,388	-		MPMX20_02112	0.15	-2.4
2,204,392	+		MPMX20_02112	0.16	-1.8
2,204,392	-		MPMX20_02112	0.16	-1.8
2,204,393	-		MPMX20_02112	0.16	-1.6
2,204,393	-		MPMX20_02112	0.16	-0.4
2,204,398	-		MPMX20_02112	0.18	-0.4
2,204,400	-		MPMX20_02112	0.18	-2.0
2,204,400	-		MPMX20_02112	0.18	-1.3
2,204,400	-		MPMX20_02112	0.18	-1.2
2,204,400	-		MPMX20_02112	0.18	+0.8
2,204,400	-		MPMX20_02112	0.18	-0.8
2,204,400	-		MPMX20_02112	0.18	-0.9
2,204,401	-		MPMX20_02112	0.18	-3.1
2,204,413	+		MPMX20_02112	0.21	-1.1
2,204,426	-		MPMX20_02112	0.25	+0.1
2,204,443	-		MPMX20_02112	0.29	-2.2
2,204,447	+		MPMX20_02112	0.30	-0.6
2,204,452	+		MPMX20_02112	0.31	-1.9
2,204,455	-		MPMX20_02112	0.32	-3.1
2,204,461	+		MPMX20_02112	0.33	-0.7
2,204,461	+		MPMX20_02112	0.33	-1.1
2,204,461	+		MPMX20_02112	0.33	-1.8
2,204,469	-		MPMX20_02112	0.35	-1.5
2,204,469	-		MPMX20_02112	0.35	-1.4
2,204,474	+		MPMX20_02112	0.37	-2.7
2,204,474	+		MPMX20_02112	0.37	-1.9
2,204,474	+		MPMX20_02112	0.37	-2.1
2,204,477	+		MPMX20_02112	0.37	-0.8
2,204,482	+		MPMX20_02112	0.39	+0.4
2,204,482	+		MPMX20_02112	0.39	-2.1
2,204,483	-		MPMX20_02112	0.39	-1.9
2,204,493	+		MPMX20_02112	0.41	+0.3
2,204,509	-		MPMX20_02112	0.45	-1.2
2,204,530	+		MPMX20_02112	0.51	-0.9
2,204,530	+		MPMX20_02112	0.51	-1.9
2,204,530	+		MPMX20_02112	0.51	+0.1
2,204,530	+		MPMX20_02112	0.51	+0.7
2,204,538	-		MPMX20_02112	0.53	+0.6
2,204,538	-		MPMX20_02112	0.53	+1.9
2,204,538	-		MPMX20_02112	0.53	+0.1
2,204,558	+		MPMX20_02112	0.58	-0.2
2,204,560	+		MPMX20_02112	0.58	-2.5
2,204,566	-		MPMX20_02112	0.60	+0.8
2,204,566	-		MPMX20_02112	0.60	-1.4
2,204,568	-		MPMX20_02112	0.60	-0.5
2,204,607	-		MPMX20_02112	0.70	-0.2
2,204,629	+		MPMX20_02112	0.75	+0.3
2,204,631	+		MPMX20_02112	0.76	-0.4
2,204,639	-		MPMX20_02112	0.78	+0.1
2,204,656	-		MPMX20_02112	0.82	-3.4
2,204,671	-		MPMX20_02112	0.86	-2.6
2,204,671	-		MPMX20_02112	0.86	-0.5
2,204,671	-		MPMX20_02112	0.86	+0.1
2,204,677	+		MPMX20_02112	0.87	+0.5
2,204,685	+		MPMX20_02112	0.89	-1.5
2,204,685	+		MPMX20_02112	0.89	+0.3
2,204,685	-		MPMX20_02112	0.89	+1.8
2,204,693	-				+1.4
2,204,715	+				+0.0
2,204,720	+				-0.4
2,204,725	+				+1.1
2,204,733	-				-0.7
2,204,746	+				-0.7
2,204,805	-		MPMX20_02113	0.15	-3.8
2,204,829	-		MPMX20_02113	0.24	+0.6
2,204,841	+		MPMX20_02113	0.28	-1.9
2,204,849	-		MPMX20_02113	0.31	-1.5
2,204,849	-		MPMX20_02113	0.31	-1.5
2,204,859	-		MPMX20_02113	0.35	+0.1
2,204,859	-		MPMX20_02113	0.35	-1.5
2,204,874	-		MPMX20_02113	0.41	-2.5
2,204,884	-		MPMX20_02113	0.45	+1.9
2,204,884	-		MPMX20_02113	0.45	+4.2