Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02023

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,114,474	-		MPMX20_02022	0.36	+1.4
2,114,486	+		MPMX20_02022	0.36	-0.8
2,114,528	-		MPMX20_02022	0.39	-1.3
2,114,534	+		MPMX20_02022	0.40	+0.3
2,114,680	+		MPMX20_02022	0.50	-2.5
2,114,680	+		MPMX20_02022	0.50	-1.7
2,114,797	-		MPMX20_02022	0.59	-0.4
2,114,815	+		MPMX20_02022	0.60	+0.7
2,114,825	-		MPMX20_02022	0.61	-0.1
2,114,825	-		MPMX20_02022	0.61	-1.4
2,114,956	-		MPMX20_02022	0.70	-0.2
2,114,964	+		MPMX20_02022	0.71	-1.6
2,114,964	+		MPMX20_02022	0.71	+0.3
2,114,978	-		MPMX20_02022	0.72	-0.7
2,115,021	-		MPMX20_02022	0.75	-0.5
2,115,041	+		MPMX20_02022	0.76	-2.2
2,115,100	-		MPMX20_02022	0.80	+0.5
2,115,130	-		MPMX20_02022	0.83	-1.5
2,115,231	+		MPMX20_02022	0.90	+0.3
2,115,239	-				-2.8
2,115,305	-				-0.1
2,115,312	+				-0.9
2,115,539	-		MPMX20_02023	0.18	-0.4
2,115,598	-		MPMX20_02023	0.24	-1.6
2,115,614	+		MPMX20_02023	0.26	-1.1
2,115,647	+		MPMX20_02023	0.29	+1.6
2,115,718	+		MPMX20_02023	0.37	-0.7
2,115,821	+		MPMX20_02023	0.48	+0.6
2,115,869	+		MPMX20_02023	0.53	+3.7
2,115,898	+		MPMX20_02023	0.56	-2.4
2,115,898	+		MPMX20_02023	0.56	-0.6
2,115,906	-		MPMX20_02023	0.57	-1.2
2,115,906	-		MPMX20_02023	0.57	-0.3
2,115,906	-		MPMX20_02023	0.57	+0.7
2,115,906	-		MPMX20_02023	0.57	-2.8
2,115,906	-		MPMX20_02023	0.57	-0.2
2,115,920	-		MPMX20_02023	0.59	+1.6
2,115,920	-		MPMX20_02023	0.59	+0.2
2,116,009	+		MPMX20_02023	0.68	-1.0
2,116,017	-		MPMX20_02023	0.69	+0.1
2,116,241	-				-0.7
2,116,361	-				-0.8
2,116,361	-				-0.3
2,116,474	+				+0.7
2,116,482	-				+2.1
2,116,489	-				-2.3
2,116,508	+		MPMX20_02024	0.10	-0.4
2,116,546	+		MPMX20_02024	0.13	-2.0
2,116,586	+		MPMX20_02024	0.16	-2.0
2,116,629	+		MPMX20_02024	0.19	-0.1
2,116,629	+		MPMX20_02024	0.19	-2.4
2,116,764	+		MPMX20_02024	0.30	-0.6
2,116,792	-		MPMX20_02024	0.32	-3.4
2,116,821	-		MPMX20_02024	0.34	-0.1
2,116,840	-		MPMX20_02024	0.36	-2.5
2,116,840	-		MPMX20_02024	0.36	-1.0
2,116,884	+		MPMX20_02024	0.39	-1.5
2,116,884	+		MPMX20_02024	0.39	-1.7
2,116,892	-		MPMX20_02024	0.40	-1.9
2,116,903	-		MPMX20_02024	0.40	-0.3
2,116,906	+		MPMX20_02024	0.41	-0.8
2,116,937	+		MPMX20_02024	0.43	-2.1
2,117,064	-		MPMX20_02024	0.53	-3.2
2,117,064	-		MPMX20_02024	0.53	-0.8
2,117,118	+		MPMX20_02024	0.57	+0.3
2,117,196	+		MPMX20_02024	0.63	-1.9
2,117,204	-		MPMX20_02024	0.64	-0.9
2,117,263	-		MPMX20_02024	0.68	+0.6