Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02022

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
2,113,139	-		MPMX20_02021	0.57	-2.4
2,113,149	-		MPMX20_02021	0.58	-2.3
2,113,220	+		MPMX20_02021	0.62	-0.6
2,113,277	+		MPMX20_02021	0.66	+0.0
2,113,277	+		MPMX20_02021	0.66	-2.3
2,113,277	+		MPMX20_02021	0.66	-2.8
2,113,277	+		MPMX20_02021	0.66	-1.7
2,113,277	+		MPMX20_02021	0.66	-3.0
2,113,277	+		MPMX20_02021	0.66	+0.6
2,113,285	-		MPMX20_02021	0.66	-1.5
2,113,510	-		MPMX20_02021	0.80	-1.3
2,113,543	+		MPMX20_02021	0.82	-3.0
2,113,570	-		MPMX20_02021	0.84	+1.3
2,113,629	+		MPMX20_02021	0.87	+0.3
2,113,637	-		MPMX20_02021	0.88	+0.7
2,113,683	-				-1.3
2,113,697	-				-1.0
2,113,760	+				+0.9
2,113,804	+				-2.4
2,113,931	-				+0.7
2,113,966	-				+0.6
2,113,966	-				+1.5
2,113,990	-				-0.3
2,114,012	-				+0.1
2,114,037	+				+0.1
2,114,037	+				-0.5
2,114,037	+				-1.4
2,114,037	+				-0.5
2,114,037	+				+0.3
2,114,045	-				-1.8
2,114,045	-				-0.3
2,114,045	-				-3.3
2,114,127	+		MPMX20_02022	0.11	-2.2
2,114,135	-		MPMX20_02022	0.11	-3.1
2,114,215	+		MPMX20_02022	0.17	-0.9
2,114,328	+		MPMX20_02022	0.25	+0.9
2,114,328	+		MPMX20_02022	0.25	+0.5
2,114,365	-		MPMX20_02022	0.28	-3.2
2,114,474	-		MPMX20_02022	0.36	+1.4
2,114,486	+		MPMX20_02022	0.36	-0.8
2,114,528	-		MPMX20_02022	0.39	-1.3
2,114,534	+		MPMX20_02022	0.40	+0.3
2,114,680	+		MPMX20_02022	0.50	-2.5
2,114,680	+		MPMX20_02022	0.50	-1.7
2,114,797	-		MPMX20_02022	0.59	-0.4
2,114,815	+		MPMX20_02022	0.60	+0.7
2,114,825	-		MPMX20_02022	0.61	-0.1
2,114,825	-		MPMX20_02022	0.61	-1.4
2,114,956	-		MPMX20_02022	0.70	-0.2
2,114,964	+		MPMX20_02022	0.71	-1.6
2,114,964	+		MPMX20_02022	0.71	+0.3
2,114,978	-		MPMX20_02022	0.72	-0.7
2,115,021	-		MPMX20_02022	0.75	-0.5
2,115,041	+		MPMX20_02022	0.76	-2.2
2,115,100	-		MPMX20_02022	0.80	+0.5
2,115,130	-		MPMX20_02022	0.83	-1.5
2,115,231	+		MPMX20_02022	0.90	+0.3
2,115,239	-				-2.8
2,115,305	-				-0.1
2,115,312	+				-0.9
2,115,539	-		MPMX20_02023	0.18	-0.4
2,115,598	-		MPMX20_02023	0.24	-1.6
2,115,614	+		MPMX20_02023	0.26	-1.1
2,115,647	+		MPMX20_02023	0.29	+1.6
2,115,718	+		MPMX20_02023	0.37	-0.7
2,115,821	+		MPMX20_02023	0.48	+0.6
2,115,869	+		MPMX20_02023	0.53	+3.7
2,115,898	+		MPMX20_02023	0.56	-2.4
2,115,898	+		MPMX20_02023	0.56	-0.6
2,115,906	-		MPMX20_02023	0.57	-1.2
2,115,906	-		MPMX20_02023	0.57	-0.3
2,115,906	-		MPMX20_02023	0.57	+0.7
2,115,906	-		MPMX20_02023	0.57	-2.8
2,115,906	-		MPMX20_02023	0.57	-0.2
2,115,920	-		MPMX20_02023	0.59	+1.6
2,115,920	-		MPMX20_02023	0.59	+0.2
2,116,009	+		MPMX20_02023	0.68	-1.0
2,116,017	-		MPMX20_02023	0.69	+0.1
2,116,241	-				-0.7
2,116,361	-				-0.8
2,116,361	-				-0.3