Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01841

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,934,183	+		MPMX20_01840	0.72	-0.2
1,934,207	+		MPMX20_01840	0.73	+5.6
1,934,284	+		MPMX20_01840	0.77	-0.3
1,934,391	-		MPMX20_01840	0.83	+1.7
1,934,423	+		MPMX20_01840	0.85	+2.1
1,934,461	-		MPMX20_01840	0.87	+4.1
1,934,475	+		MPMX20_01840	0.87	+5.8
1,934,483	+		MPMX20_01840	0.88	+2.5
1,934,483	+		MPMX20_01840	0.88	+1.7
1,934,483	+		MPMX20_01840	0.88	+4.6
1,934,483	+		MPMX20_01840	0.88	+3.9
1,934,614	+				+0.7
1,934,614	+				+3.9
1,934,614	+				+4.2
1,934,614	+				+3.1
1,934,622	-				+0.1
1,934,622	-				+2.2
1,934,661	-				+1.5
1,934,668	+				+1.1
1,934,668	+				+5.1
1,934,668	-				+0.3
1,934,751	+				+4.2
1,934,751	+				-2.9
1,934,751	+				+4.4
1,934,751	+				-0.8
1,934,751	+				+6.9
1,934,752	+				+3.8
1,934,759	-				+1.7
1,934,759	-				+1.7
1,934,759	-				+2.4
1,934,759	-				+0.7
1,934,759	-				+2.6
1,934,759	-				+3.9
1,934,760	-				+2.1
1,934,760	-				-1.1
1,934,760	-				+2.3
1,934,788	+				-0.9
1,934,805	+				+2.9
1,934,805	+				+6.0
1,934,825	+				-2.1
1,934,826	+				+5.0
1,934,836	+				+2.4
1,934,837	+				+3.6
1,934,844	-				+1.0
1,934,844	-				+7.9
1,934,894	+				+2.5
1,934,900	-				+1.1
1,934,983	-				+2.7
1,934,983	-				+0.4
1,935,024	-				+2.0
1,935,035	-				+1.7
1,935,054	+				+0.3
1,935,076	-				-0.6
1,935,107	+				-1.0
1,935,114	-				+1.0
1,935,116	-				-1.5
1,935,174	+				+0.8
1,935,214	-				+1.0
1,935,231	+		MPMX20_01841	0.10	-0.7
1,935,256	-		MPMX20_01841	0.14	+0.4
1,935,261	-		MPMX20_01841	0.14	-1.8
1,935,285	-		MPMX20_01841	0.17	-0.3
1,935,451	-		MPMX20_01841	0.40	+0.4
1,935,451	-		MPMX20_01841	0.40	+0.2
1,935,495	+		MPMX20_01841	0.45	-2.8
1,935,514	+		MPMX20_01841	0.48	-0.3
1,935,551	+		MPMX20_01841	0.53	+0.1
1,935,588	-		MPMX20_01841	0.58	-2.4
1,935,590	+		MPMX20_01841	0.58	-2.3
1,935,593	-		MPMX20_01841	0.59	-0.5
1,935,606	-		MPMX20_01841	0.60	+0.8
1,935,643	+		MPMX20_01841	0.65	+0.4
1,935,653	-		MPMX20_01841	0.67	-1.8
1,935,674	+		MPMX20_01841	0.69	+0.7
1,935,674	+		MPMX20_01841	0.69	-0.8
1,935,682	-		MPMX20_01841	0.70	+1.1
1,935,709	+		MPMX20_01841	0.74	-2.1
1,935,709	+		MPMX20_01841	0.74	-0.5
1,935,744	+		MPMX20_01841	0.79	-1.9
1,935,745	-		MPMX20_01841	0.79	-0.6
1,935,800	-		MPMX20_01841	0.86	-2.8
1,935,808	-		MPMX20_01841	0.87	+0.9
1,935,820	-		MPMX20_01841	0.89	-0.1
1,935,858	+				-0.1
1,935,909	+				+1.7
1,936,034	+				-0.9
1,936,121	+		MPMX20_01842	0.15	+1.0
1,936,148	+		MPMX20_01842	0.18	-0.4
1,936,170	+		MPMX20_01842	0.20	+0.1
1,936,273	-		MPMX20_01842	0.33	+1.3
1,936,297	+		MPMX20_01842	0.35	-2.1
1,936,305	-		MPMX20_01842	0.36	+0.4
1,936,324	-		MPMX20_01842	0.38	-2.4
1,936,333	-		MPMX20_01842	0.40	+0.4
1,936,380	-		MPMX20_01842	0.45	-2.7
1,936,466	+		MPMX20_01842	0.55	-1.4
1,936,470	-		MPMX20_01842	0.56	+0.3
1,936,542	-		MPMX20_01842	0.64	-0.6
1,936,590	-		MPMX20_01842	0.70	+0.1
1,936,602	+		MPMX20_01842	0.71	+0.4
1,936,684	+		MPMX20_01842	0.81	-0.1
1,936,686	-		MPMX20_01842	0.81	+2.7
1,936,747	-		MPMX20_01842	0.88	-0.9
1,936,758	-		MPMX20_01842	0.89	-0.9
1,936,762	+		MPMX20_01842	0.90	+0.4
1,936,765	+				+0.9
1,936,806	-				+1.5
1,936,829	-				-2.8
1,936,829	-				+2.1
1,936,862	+				+2.3