Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01780

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,871,927	+				-1.9
1,871,927	+				+1.4
1,871,935	-		MPMX20_01780	0.11	+0.7
1,871,935	-		MPMX20_01780	0.11	+1.6
1,872,140	+		MPMX20_01780	0.36	+2.1
1,872,140	+		MPMX20_01780	0.36	-3.2
1,872,140	+		MPMX20_01780	0.36	+0.7
1,872,184	+		MPMX20_01780	0.42	-0.6
1,872,306	+		MPMX20_01780	0.57	+0.0
1,872,314	-		MPMX20_01780	0.58	+0.6
1,872,314	-		MPMX20_01780	0.58	-0.1
1,872,395	+		MPMX20_01780	0.69	-2.0
1,872,395	+		MPMX20_01780	0.69	-1.3
1,872,403	-		MPMX20_01780	0.70	-3.7
1,872,513	+		MPMX20_01780	0.83	+1.1
1,872,521	-		MPMX20_01780	0.84	+0.5
1,872,526	-		MPMX20_01780	0.85	-0.2
1,872,531	+		MPMX20_01780	0.86	+0.3
1,872,548	+		MPMX20_01780	0.88	+0.7
1,872,556	-		MPMX20_01780	0.89	+3.9
1,872,570	-				+0.4
1,872,583	-				-2.3
1,872,598	+				-0.8
1,872,608	+				-0.1
1,872,608	+				-0.5
1,872,616	-				-2.6
1,872,616	-				+0.7
1,872,616	-				+0.1
1,872,616	-				-0.1
1,872,700	+				+1.1
1,872,784	-				+0.3
1,872,784	-				+0.5
1,872,862	-				-0.1
1,872,867	-				-0.1
1,872,876	+				+2.1
1,872,876	+				+1.0
1,872,933	+				-1.0
1,872,952	-				-3.0
1,872,995	+				-1.2
1,873,010	+				-1.0
1,873,093	-		MPMX20_01781	0.11	-1.3
1,873,127	-		MPMX20_01781	0.13	+0.3
1,873,143	+		MPMX20_01781	0.14	-0.6
1,873,146	-		MPMX20_01781	0.14	-2.3
1,873,146	-		MPMX20_01781	0.14	-3.2
1,873,151	-		MPMX20_01781	0.15	-1.1
1,873,265	-		MPMX20_01781	0.23	-1.6
1,873,301	-		MPMX20_01781	0.25	+1.6
1,873,301	-		MPMX20_01781	0.25	-1.0
1,873,359	+		MPMX20_01781	0.29	+1.5
1,873,476	+		MPMX20_01781	0.37	+0.2
1,873,575	-		MPMX20_01781	0.44	-1.5
1,873,585	-		MPMX20_01781	0.45	+0.3