Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01776

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,867,503	+		MPMX20_01775	0.40	-1.0
1,867,503	+		MPMX20_01775	0.40	+0.6
1,867,623	-		MPMX20_01775	0.49	-0.8
1,867,713	-		MPMX20_01775	0.57	-0.7
1,867,736	-		MPMX20_01775	0.58	-2.1
1,867,773	+		MPMX20_01775	0.61	-2.2
1,867,813	+		MPMX20_01775	0.65	-1.3
1,867,869	-		MPMX20_01775	0.69	+1.1
1,867,917	-		MPMX20_01775	0.73	-1.4
1,867,929	-		MPMX20_01775	0.74	+2.8
1,867,964	+		MPMX20_01775	0.77	-2.7
1,868,075	-		MPMX20_01775	0.86	+0.4
1,868,075	-		MPMX20_01775	0.86	-2.5
1,868,094	-		MPMX20_01775	0.87	+0.3
1,868,134	-				-0.7
1,868,146	-				-1.1
1,868,175	+				-0.0
1,868,175	+				-1.9
1,868,183	+				+0.3
1,868,183	+				-0.1
1,868,184	+				-1.9
1,868,185	+				-2.1
1,868,192	-				-0.5
1,868,194	+				-0.7
1,868,250	+				-1.1
1,868,315	-				-0.3
1,868,352	-				-2.5
1,868,354	-				+2.0
1,868,389	+				+1.3
1,868,389	+				-1.2
1,868,420	-				+0.8
1,868,420	-				+2.0
1,868,455	-		MPMX20_01776	0.10	-1.2
1,868,511	+		MPMX20_01776	0.17	-1.3
1,868,514	-		MPMX20_01776	0.17	-0.7
1,868,688	-		MPMX20_01776	0.39	-0.7
1,868,719	+		MPMX20_01776	0.43	+0.6
1,868,719	+		MPMX20_01776	0.43	-2.6
1,868,719	+		MPMX20_01776	0.43	-0.2
1,868,727	-		MPMX20_01776	0.44	+1.4
1,868,727	-		MPMX20_01776	0.44	-1.0
1,868,771	+		MPMX20_01776	0.49	+0.7
1,868,793	+		MPMX20_01776	0.52	-1.0
1,868,793	-		MPMX20_01776	0.52	+0.3
1,868,803	+		MPMX20_01776	0.53	+0.7
1,868,803	+		MPMX20_01776	0.53	-1.7
1,868,803	+		MPMX20_01776	0.53	-0.3
1,869,009	+		MPMX20_01776	0.79	-2.5
1,869,058	-		MPMX20_01776	0.85	+0.0
1,869,114	+				+0.7
1,869,122	-				-1.5
1,869,168	+				+0.7
1,869,277	+				-1.2
1,869,285	-				-1.1
1,869,287	-				+1.5
1,869,287	-				-1.1
1,869,323	+		MPMX20_01777	0.13	-2.4
1,869,352	+		MPMX20_01777	0.16	+0.3
1,869,411	+		MPMX20_01777	0.22	+0.7
1,869,487	+		MPMX20_01777	0.30	-0.2
1,869,496	+		MPMX20_01777	0.30	-1.3
1,869,651	-		MPMX20_01777	0.46	-0.1
1,869,676	+		MPMX20_01777	0.48	+0.7
1,869,892	+		MPMX20_01777	0.69	+3.0
1,869,900	-		MPMX20_01777	0.70	-2.1
1,869,984	+		MPMX20_01777	0.78	+0.7
1,869,992	-		MPMX20_01777	0.79	+1.0
1,870,003	-		MPMX20_01777	0.80	+3.0
1,870,045	+		MPMX20_01777	0.84	+2.1
1,870,067	+		MPMX20_01777	0.86	+0.8
1,870,163	+				-1.1