Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01665

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,762,863	-		MPMX20_01664	0.31	-0.4
1,762,929	-		MPMX20_01664	0.35	-1.7
1,762,973	-		MPMX20_01664	0.39	-1.3
1,762,973	-		MPMX20_01664	0.39	-0.9
1,763,085	+		MPMX20_01664	0.47	-1.0
1,763,093	-		MPMX20_01664	0.47	+2.9
1,763,141	-		MPMX20_01664	0.51	+1.1
1,763,203	-		MPMX20_01664	0.55	+0.7
1,763,258	-		MPMX20_01664	0.59	-1.4
1,763,331	-		MPMX20_01664	0.64	-1.0
1,763,407	-		MPMX20_01664	0.70	+0.7
1,763,493	+		MPMX20_01664	0.76	-0.3
1,763,515	-		MPMX20_01664	0.77	-0.1
1,763,542	-		MPMX20_01664	0.79	-2.9
1,763,544	+		MPMX20_01664	0.79	+1.8
1,763,544	+		MPMX20_01664	0.79	+0.3
1,763,549	+		MPMX20_01664	0.80	-1.0
1,763,549	+		MPMX20_01664	0.80	+0.8
1,763,562	-		MPMX20_01664	0.81	-1.2
1,763,708	-				-1.1
1,763,714	-				+0.7
1,763,737	-				-3.4
1,763,802	-				-1.2
1,763,825	+				-1.1
1,763,825	+				+0.1
1,763,842	+				+1.1
1,763,845	-				-0.1
1,763,920	-		MPMX20_01665	0.49	-1.0
1,763,924	-		MPMX20_01665	0.51	-3.3
1,763,950	+		MPMX20_01665	0.65	-0.1
1,763,950	+		MPMX20_01665	0.65	-0.3
1,763,953	-		MPMX20_01665	0.66	-1.7
1,764,078	-				-1.6
1,764,078	-				-2.4
1,764,114	+				-0.7
1,764,114	+				-0.0
1,764,114	+				+0.7
1,764,206	+		MPMX20_01666	0.11	-0.6
1,764,235	-		MPMX20_01666	0.13	-1.0
1,764,237	-		MPMX20_01666	0.13	-0.6
1,764,250	-		MPMX20_01666	0.14	+1.1
1,764,270	+		MPMX20_01666	0.15	+0.3
1,764,278	+		MPMX20_01666	0.16	-1.3
1,764,278	+		MPMX20_01666	0.16	-1.0
1,764,286	-		MPMX20_01666	0.16	+0.8
1,764,293	-		MPMX20_01666	0.17	+1.4
1,764,467	-		MPMX20_01666	0.28	+1.1
1,764,620	-		MPMX20_01666	0.37	-1.1
1,764,682	+		MPMX20_01666	0.41	-1.9
1,764,718	-		MPMX20_01666	0.44	-0.6
1,764,725	-		MPMX20_01666	0.44	+0.8
1,764,796	+		MPMX20_01666	0.49	-0.5
1,764,820	-		MPMX20_01666	0.50	-0.5
1,764,864	+		MPMX20_01666	0.53	-1.6
1,764,872	-		MPMX20_01666	0.53	-0.1
1,764,943	+		MPMX20_01666	0.58	+1.3