Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01663

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,761,106	-				+1.3
1,761,130	+		MPMX20_01662	0.11	+0.8
1,761,190	-		MPMX20_01662	0.17	-1.2
1,761,291	-		MPMX20_01662	0.28	+1.4
1,761,391	+		MPMX20_01662	0.39	+0.3
1,761,468	+		MPMX20_01662	0.47	-1.6
1,761,468	+		MPMX20_01662	0.47	-0.8
1,761,476	-		MPMX20_01662	0.48	-1.3
1,761,476	-		MPMX20_01662	0.48	-2.8
1,761,484	+		MPMX20_01662	0.49	-1.4
1,761,588	-		MPMX20_01662	0.60	-3.1
1,761,603	-		MPMX20_01662	0.62	-0.1
1,761,633	-		MPMX20_01662	0.65	+0.7
1,761,661	-		MPMX20_01662	0.68	-1.2
1,761,664	+		MPMX20_01662	0.68	+0.2
1,761,717	+		MPMX20_01662	0.74	+1.2
1,761,723	-		MPMX20_01662	0.74	-0.9
1,761,735	+		MPMX20_01662	0.76	-0.4
1,761,735	+		MPMX20_01662	0.76	+0.9
1,761,743	-		MPMX20_01662	0.77	-0.7
1,761,780	+		MPMX20_01662	0.81	-1.4
1,761,875	+				+1.1
1,761,880	+				-0.0
1,761,900	+				-0.2
1,761,900	+				+1.0
1,761,905	+				-2.1
1,761,913	-				+0.4
1,761,963	+				-0.2
1,761,971	-				-1.1
1,761,993	-				+1.4
1,762,003	-				+2.9
1,762,039	+				+1.4
1,762,049	-				+0.7
1,762,074	-				-0.9
1,762,074	-				-0.1
1,762,172	+		MPMX20_01663	0.31	-1.0
1,762,172	+		MPMX20_01663	0.31	+2.7
1,762,180	-		MPMX20_01663	0.33	+1.5
1,762,180	-		MPMX20_01663	0.33	+1.9
1,762,180	-		MPMX20_01663	0.33	+0.2
1,762,180	-		MPMX20_01663	0.33	-0.3
1,762,181	+		MPMX20_01663	0.34	-2.8
1,762,271	+		MPMX20_01663	0.57	+2.6
1,762,286	-		MPMX20_01663	0.61	-1.1
1,762,298	-		MPMX20_01663	0.64	+1.2
1,762,316	+		MPMX20_01663	0.68	+0.3
1,762,324	-		MPMX20_01663	0.71	-1.4
1,762,346	-		MPMX20_01663	0.76	-3.3
1,762,357	-		MPMX20_01663	0.79	-0.9
1,762,375	+		MPMX20_01663	0.84	+1.6
1,762,381	-		MPMX20_01663	0.85	-1.8
1,762,388	-		MPMX20_01663	0.87	+1.8
1,762,421	-				-0.6
1,762,579	-		MPMX20_01664	0.10	+0.4
1,762,623	+		MPMX20_01664	0.14	-1.4
1,762,640	-		MPMX20_01664	0.15	-2.9
1,762,818	-		MPMX20_01664	0.27	+0.2
1,762,863	-		MPMX20_01664	0.31	-0.4
1,762,929	-		MPMX20_01664	0.35	-1.7
1,762,973	-		MPMX20_01664	0.39	-1.3
1,762,973	-		MPMX20_01664	0.39	-0.9
1,763,085	+		MPMX20_01664	0.47	-1.0
1,763,093	-		MPMX20_01664	0.47	+2.9
1,763,141	-		MPMX20_01664	0.51	+1.1
1,763,203	-		MPMX20_01664	0.55	+0.7
1,763,258	-		MPMX20_01664	0.59	-1.4
1,763,331	-		MPMX20_01664	0.64	-1.0
1,763,407	-		MPMX20_01664	0.70	+0.7