Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01232

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,289,371	+		MPMX20_01231	0.55	-1.6
1,289,371	+		MPMX20_01231	0.55	+0.2
1,289,386	+		MPMX20_01231	0.56	-0.5
1,289,411	+		MPMX20_01231	0.57	+0.2
1,289,455	+		MPMX20_01231	0.59	+0.1
1,289,465	-		MPMX20_01231	0.60	+0.7
1,289,478	+		MPMX20_01231	0.60	-2.4
1,289,486	-		MPMX20_01231	0.61	-1.1
1,289,486	-		MPMX20_01231	0.61	-3.8
1,289,506	+		MPMX20_01231	0.62	+0.4
1,289,563	+		MPMX20_01231	0.65	+1.1
1,289,563	+		MPMX20_01231	0.65	+0.0
1,289,563	+		MPMX20_01231	0.65	-0.2
1,289,570	+		MPMX20_01231	0.65	-2.2
1,289,585	+		MPMX20_01231	0.66	-1.0
1,289,593	-		MPMX20_01231	0.66	-0.9
1,289,669	+		MPMX20_01231	0.70	-2.2
1,289,679	-		MPMX20_01231	0.70	-2.3
1,289,686	+		MPMX20_01231	0.71	+4.0
1,289,694	-		MPMX20_01231	0.71	-0.6
1,289,694	-		MPMX20_01231	0.71	-2.6
1,289,694	-		MPMX20_01231	0.71	-1.2
1,289,745	-		MPMX20_01231	0.74	-2.1
1,289,795	-		MPMX20_01231	0.76	+0.8
1,289,800	+		MPMX20_01231	0.76	+0.1
1,289,800	+		MPMX20_01231	0.76	-3.2
1,289,808	-		MPMX20_01231	0.77	-1.5
1,289,815	+		MPMX20_01231	0.77	-1.2
1,289,849	-		MPMX20_01231	0.79	+1.7
1,289,872	-		MPMX20_01231	0.80	+2.1
1,289,874	+		MPMX20_01231	0.80	+1.9
1,289,882	-		MPMX20_01231	0.80	-1.1
1,289,882	-		MPMX20_01231	0.80	+0.5
1,289,882	-		MPMX20_01231	0.80	-2.5
1,289,901	+		MPMX20_01231	0.81	+0.3
1,289,914	+		MPMX20_01231	0.82	-0.1
1,289,930	+		MPMX20_01231	0.83	-0.0
1,289,931	+		MPMX20_01231	0.83	-2.1
1,289,931	+		MPMX20_01231	0.83	+2.7
1,289,939	-		MPMX20_01231	0.83	+1.0
1,289,983	+		MPMX20_01231	0.85	+1.3
1,289,983	+		MPMX20_01231	0.85	-0.2
1,289,983	+		MPMX20_01231	0.85	+0.2
1,289,999	+		MPMX20_01231	0.86	+1.2
1,289,999	+		MPMX20_01231	0.86	-1.1
1,289,999	+		MPMX20_01231	0.86	-2.8
1,289,999	+		MPMX20_01231	0.86	+0.4
1,289,999	+		MPMX20_01231	0.86	+0.0
1,289,999	+		MPMX20_01231	0.86	+0.5
1,289,999	+		MPMX20_01231	0.86	+0.1
1,290,000	+		MPMX20_01231	0.86	-3.1
1,290,000	+		MPMX20_01231	0.86	+0.1
1,290,000	+		MPMX20_01231	0.86	-0.6
1,290,000	+		MPMX20_01231	0.86	+0.6
1,290,000	+		MPMX20_01231	0.86	+0.9
1,290,000	+		MPMX20_01231	0.86	-0.5
1,290,000	+		MPMX20_01231	0.86	-0.3
1,290,007	-		MPMX20_01231	0.86	-3.3
1,290,008	-		MPMX20_01231	0.86	+0.5
1,290,022	-		MPMX20_01231	0.87	-1.6
1,290,057	-		MPMX20_01231	0.89	+1.7
1,290,057	-		MPMX20_01231	0.89	-0.8
1,290,059	+		MPMX20_01231	0.89	+0.1
1,290,064	+		MPMX20_01231	0.89	-1.4
1,290,078	+		MPMX20_01231	0.90	-1.7
1,290,078	+		MPMX20_01231	0.90	-2.5
1,290,078	+		MPMX20_01231	0.90	-0.8
1,290,103	-				-0.3
1,290,105	-				-5.6
1,290,120	+				-0.1
1,290,120	+				+1.7
1,290,122	+				+0.8
1,290,122	+				+0.7
1,290,122	+				+0.0
1,290,128	-				-0.1
1,290,129	+				-2.4
1,290,136	+				+0.1
1,290,137	+				-2.5
1,290,141	+				-0.3
1,290,146	+				-0.5
1,290,153	+				-2.5
1,290,153	+				+1.7
1,290,160	+				-1.6
1,290,166	+				+0.0
1,290,184	+				+0.3
1,290,188	+				+0.2
1,290,198	+				-0.1
1,290,198	+				+0.1
1,290,198	+				+0.9
1,290,202	+				-0.9
1,290,202	+				+0.9
1,290,202	+				+4.1
1,290,202	+				+0.7
1,290,208	+				-3.4
1,290,208	+				-1.5
1,290,208	+				+1.5
1,290,213	+				+1.3
1,290,213	+				+0.8
1,290,218	+				-2.0
1,290,218	+				+1.7
1,290,220	+				+0.1
1,290,221	-				-0.3
1,290,235	+				-0.1
1,290,235	+				-1.0
1,290,235	+				-1.5
1,290,235	+				+0.4
1,290,235	+				+0.7
1,290,251	+				-0.7
1,290,251	+				+1.5
1,290,251	+				+3.0
1,290,251	+				-3.2
1,290,251	+				-0.2
1,290,256	+				+0.2
1,290,259	-				-0.8
1,290,260	+				-2.8
1,290,260	+				+1.2
1,290,260	+				-2.5
1,290,260	+				-0.9
1,290,260	+				-0.0
1,290,268	+				-2.6
1,290,268	+				+1.0
1,290,268	+				-1.5
1,290,268	+				+0.2
1,290,268	+				-0.6
1,290,268	+				-1.2
1,290,268	+				+1.7
1,290,268	+				-0.7
1,290,270	+				-0.1
1,290,270	+				+0.5
1,290,270	+				-0.8
1,290,287	+				+0.7
1,290,287	+				-0.1
1,290,287	+				+1.1
1,290,287	+				+1.5
1,290,291	+				-1.0
1,290,309	+				+1.5
1,290,312	+				+0.4
1,290,312	+				-0.2
1,290,312	+				-1.5
1,290,312	+				-0.0
1,290,312	+				-0.8
1,290,312	+				-0.5
1,290,312	+				-0.8
1,290,312	+				+2.7
1,290,330	-				-0.5
1,290,345	+				-0.9
1,290,346	+				+0.1
1,290,350	+				+1.4
1,290,350	+				-0.6
1,290,358	-				+0.7
1,290,360	+				-1.6
1,290,365	+				-0.3
1,290,373	-				-1.3
1,290,446	-				-2.2
1,290,446	-				-1.2
1,290,466	+				-2.1
1,290,466	-				-3.0
1,290,469	-				-4.3
1,290,469	-				-2.0
1,290,473	+				-0.1
1,290,474	+				-1.1
1,290,474	-				-0.3
1,290,474	-				-3.3
1,290,476	-				-1.3
1,290,480	+				-2.2
1,290,480	+				-3.7
1,290,480	+				-2.4
1,290,481	-				-1.9
1,290,482	-				-2.2
1,290,487	-				-1.8
1,290,487	-				-1.5
1,290,487	-				+0.5
1,290,488	-				-2.0
1,290,488	-				-1.9
1,290,488	-				-2.7
1,290,488	-				-0.3
1,290,488	-				-0.6
1,290,488	-				-1.6
1,290,491	+				-2.5
1,290,499	-				-1.6
1,290,500	+				-3.5
1,290,508	+				-0.6
1,290,509	-				+1.5
1,290,550	+				-1.8
1,290,550	+				-0.5
1,290,555	+				-0.6
1,290,555	+				+1.1
1,290,557	-				-0.9
1,290,558	-				+1.7
1,290,558	-				+0.6
1,290,558	-				-1.9
1,290,562	+				+0.4
1,290,562	+				-3.1
1,290,568	+				-0.5
1,290,570	-				-0.8
1,290,571	+				-1.6
1,290,571	+				-1.6
1,290,572	-				-0.6
1,290,572	-				-0.5
1,290,577	+				-2.2
1,290,577	+				-0.3
1,290,582	+		MPMX20_01232	0.10	+0.1
1,290,585	-		MPMX20_01232	0.10	-2.4
1,290,592	+		MPMX20_01232	0.11	+1.7
1,290,592	+		MPMX20_01232	0.11	+0.1
1,290,593	+		MPMX20_01232	0.11	-0.8
1,290,593	+		MPMX20_01232	0.11	-4.3
1,290,593	+		MPMX20_01232	0.11	-2.2
1,290,593	+		MPMX20_01232	0.11	-0.3
1,290,593	+		MPMX20_01232	0.11	-1.8
1,290,600	+		MPMX20_01232	0.11	-1.7
1,290,605	+		MPMX20_01232	0.11	+1.6
1,290,605	+		MPMX20_01232	0.11	-0.6
1,290,605	+		MPMX20_01232	0.11	+2.7
1,290,605	+		MPMX20_01232	0.11	-2.2
1,290,605	+		MPMX20_01232	0.11	-2.7
1,290,605	+		MPMX20_01232	0.11	-0.3
1,290,605	+		MPMX20_01232	0.11	-2.1
1,290,605	+		MPMX20_01232	0.11	-1.2
1,290,606	+		MPMX20_01232	0.11	-1.0
1,290,608	-		MPMX20_01232	0.11	+0.4
1,290,612	+		MPMX20_01232	0.12	-0.3
1,290,612	+		MPMX20_01232	0.12	-0.1
1,290,633	+		MPMX20_01232	0.13	-0.8
1,290,667	+		MPMX20_01232	0.14	+0.9
1,290,667	+		MPMX20_01232	0.14	-3.9
1,290,667	+		MPMX20_01232	0.14	+0.7
1,290,675	+		MPMX20_01232	0.15	+1.1
1,290,680	+		MPMX20_01232	0.15	-2.1
1,290,680	+		MPMX20_01232	0.15	-3.6
1,290,680	+		MPMX20_01232	0.15	-1.5
1,290,928	-		MPMX20_01232	0.27	-0.5
1,290,929	-		MPMX20_01232	0.27	-2.5
1,290,929	-		MPMX20_01232	0.27	-1.2
1,290,934	-		MPMX20_01232	0.27	-1.4
1,290,937	-		MPMX20_01232	0.27	-2.6
1,290,938	-		MPMX20_01232	0.27	+0.1
1,290,938	-		MPMX20_01232	0.27	-1.2
1,290,938	-		MPMX20_01232	0.27	-1.0
1,290,938	-		MPMX20_01232	0.27	+2.0
1,290,938	-		MPMX20_01232	0.27	-1.6
1,290,938	-		MPMX20_01232	0.27	-0.8
1,290,938	-		MPMX20_01232	0.27	-0.3
1,290,938	-		MPMX20_01232	0.27	-2.6
1,290,938	-		MPMX20_01232	0.27	+1.9
1,290,938	-		MPMX20_01232	0.27	-1.5
1,290,938	-		MPMX20_01232	0.27	+0.4
1,290,938	-		MPMX20_01232	0.27	-0.3
1,290,938	-		MPMX20_01232	0.27	+0.7
1,290,938	-		MPMX20_01232	0.27	-0.1
1,290,938	-		MPMX20_01232	0.27	-0.6
1,290,938	-		MPMX20_01232	0.27	-1.3
1,290,938	-		MPMX20_01232	0.27	-2.7
1,290,938	-		MPMX20_01232	0.27	-1.5
1,290,938	-		MPMX20_01232	0.27	+1.7
1,290,938	-		MPMX20_01232	0.27	+0.7
1,290,938	-		MPMX20_01232	0.27	-0.1
1,290,938	-		MPMX20_01232	0.27	-2.4
1,290,938	-		MPMX20_01232	0.27	-3.2
1,290,938	-		MPMX20_01232	0.27	-2.8
1,290,938	-		MPMX20_01232	0.27	+1.1
1,290,938	-		MPMX20_01232	0.27	+0.9
1,290,938	-		MPMX20_01232	0.27	+0.1
1,290,938	-		MPMX20_01232	0.27	+1.7
1,290,938	-		MPMX20_01232	0.27	+0.7
1,290,938	-		MPMX20_01232	0.27	-1.3
1,290,938	-		MPMX20_01232	0.27	-0.3
1,290,938	-		MPMX20_01232	0.27	-1.4
1,290,938	-		MPMX20_01232	0.27	-2.7
1,290,938	-		MPMX20_01232	0.27	-0.6
1,290,938	-		MPMX20_01232	0.27	-2.4
1,290,938	-		MPMX20_01232	0.27	-1.2
1,290,938	-		MPMX20_01232	0.27	-3.0
1,290,938	-		MPMX20_01232	0.27	-0.1
1,290,938	-		MPMX20_01232	0.27	-0.5
1,290,938	-		MPMX20_01232	0.27	-1.8
1,290,939	-		MPMX20_01232	0.27	-2.9
1,290,948	-		MPMX20_01232	0.28	-1.9
1,290,948	-		MPMX20_01232	0.28	-1.5
1,290,948	-		MPMX20_01232	0.28	-1.5
1,290,948	-		MPMX20_01232	0.28	-1.0
1,290,948	-		MPMX20_01232	0.28	-2.0
1,290,948	-		MPMX20_01232	0.28	+0.1
1,290,949	-		MPMX20_01232	0.28	-0.9
1,290,949	-		MPMX20_01232	0.28	+1.1
1,290,950	-		MPMX20_01232	0.28	-1.3
1,290,950	-		MPMX20_01232	0.28	-1.1
1,290,950	-		MPMX20_01232	0.28	-1.1
1,290,950	-		MPMX20_01232	0.28	+0.1
1,290,950	-		MPMX20_01232	0.28	+1.7
1,290,950	-		MPMX20_01232	0.28	-1.6
1,290,950	-		MPMX20_01232	0.28	-1.8
1,290,950	-		MPMX20_01232	0.28	-2.2
1,290,950	-		MPMX20_01232	0.28	+1.1
1,290,950	-		MPMX20_01232	0.28	-2.0
1,290,950	-		MPMX20_01232	0.28	-0.3
1,290,950	-		MPMX20_01232	0.28	+2.7
1,290,950	-		MPMX20_01232	0.28	-1.3
1,290,950	-		MPMX20_01232	0.28	+0.2
1,290,950	-		MPMX20_01232	0.28	-0.5
1,290,950	-		MPMX20_01232	0.28	-1.7
1,290,950	-		MPMX20_01232	0.28	+3.7
1,290,950	-		MPMX20_01232	0.28	-0.8
1,290,950	-		MPMX20_01232	0.28	-0.1
1,290,950	-		MPMX20_01232	0.28	-0.6
1,290,950	-		MPMX20_01232	0.28	+0.4
1,290,950	-		MPMX20_01232	0.28	-0.5
1,290,950	-		MPMX20_01232	0.28	-0.8
1,290,953	-		MPMX20_01232	0.28	+1.1
1,290,958	-		MPMX20_01232	0.28	-2.2
1,290,958	-		MPMX20_01232	0.28	-2.1
1,290,958	-		MPMX20_01232	0.28	-0.8
1,290,958	-		MPMX20_01232	0.28	-2.3
1,290,958	-		MPMX20_01232	0.28	+1.7
1,290,958	-		MPMX20_01232	0.28	-0.5
1,290,958	-		MPMX20_01232	0.28	-0.3
1,290,958	-		MPMX20_01232	0.28	-0.1
1,290,958	-		MPMX20_01232	0.28	-1.6
1,290,958	-		MPMX20_01232	0.28	-0.2
1,290,960	-		MPMX20_01232	0.28	-1.2
1,290,960	-		MPMX20_01232	0.28	-2.3
1,290,960	-		MPMX20_01232	0.28	+1.1
1,290,960	-		MPMX20_01232	0.28	-1.2
1,290,960	-		MPMX20_01232	0.28	-0.8
1,290,960	-		MPMX20_01232	0.28	-0.5
1,290,960	-		MPMX20_01232	0.28	-2.1
1,290,960	-		MPMX20_01232	0.28	-0.6
1,290,960	-		MPMX20_01232	0.28	-2.4
1,290,960	-		MPMX20_01232	0.28	-1.7
1,290,960	-		MPMX20_01232	0.28	-1.8
1,290,960	-		MPMX20_01232	0.28	-1.8
1,290,960	-		MPMX20_01232	0.28	-1.3
1,290,960	-		MPMX20_01232	0.28	+0.7
1,290,960	-		MPMX20_01232	0.28	-1.2
1,290,960	-		MPMX20_01232	0.28	-1.4
1,290,960	-		MPMX20_01232	0.28	-1.8
1,290,960	-		MPMX20_01232	0.28	-1.6
1,290,960	-		MPMX20_01232	0.28	-0.4
1,290,960	-		MPMX20_01232	0.28	-1.2
1,290,960	-		MPMX20_01232	0.28	-2.6
1,290,960	-		MPMX20_01232	0.28	-1.6
1,290,963	-		MPMX20_01232	0.28	+0.7
1,290,969	-		MPMX20_01232	0.29	-1.6
1,290,971	-		MPMX20_01232	0.29	+1.5
1,290,971	-		MPMX20_01232	0.29	+0.1
1,290,971	-		MPMX20_01232	0.29	-2.7
1,290,971	-		MPMX20_01232	0.29	-1.8
1,290,971	-		MPMX20_01232	0.29	-2.6
1,290,971	-		MPMX20_01232	0.29	+1.7
1,290,987	+		MPMX20_01232	0.29	+0.1
1,290,994	-		MPMX20_01232	0.30	-0.4
1,290,994	-		MPMX20_01232	0.30	-0.1
1,290,995	-		MPMX20_01232	0.30	+0.7
1,290,995	-		MPMX20_01232	0.30	+0.4
1,290,995	-		MPMX20_01232	0.30	-0.8
1,290,995	-		MPMX20_01232	0.30	-0.1
1,290,995	-		MPMX20_01232	0.30	+0.1
1,290,995	-		MPMX20_01232	0.30	-0.6
1,290,995	-		MPMX20_01232	0.30	-0.5
1,290,997	+		MPMX20_01232	0.30	-0.1
1,290,997	+		MPMX20_01232	0.30	-0.3
1,290,997	+		MPMX20_01232	0.30	+0.1
1,290,997	+		MPMX20_01232	0.30	-1.0
1,291,005	-		MPMX20_01232	0.30	-0.3
1,291,055	+		MPMX20_01232	0.33	-0.6
1,291,073	+		MPMX20_01232	0.33	+0.1
1,291,073	+		MPMX20_01232	0.33	+0.1
1,291,078	+		MPMX20_01232	0.34	-2.0
1,291,078	+		MPMX20_01232	0.34	+0.1
1,291,078	+		MPMX20_01232	0.34	-0.1
1,291,078	+		MPMX20_01232	0.34	-0.6
1,291,078	+		MPMX20_01232	0.34	-0.8
1,291,079	+		MPMX20_01232	0.34	-0.3
1,291,083	+		MPMX20_01232	0.34	-0.3
1,291,083	+		MPMX20_01232	0.34	-2.1
1,291,086	+		MPMX20_01232	0.34	-0.3
1,291,088	+		MPMX20_01232	0.34	-1.0
1,291,093	+		MPMX20_01232	0.34	-1.1
1,291,133	+		MPMX20_01232	0.36	-1.0
1,291,135	+		MPMX20_01232	0.36	-1.4
1,291,141	-		MPMX20_01232	0.37	-2.1
1,291,184	+		MPMX20_01232	0.39	-0.1
1,291,273	+		MPMX20_01232	0.43	-0.3
1,291,286	+		MPMX20_01232	0.44	-0.9
1,291,286	+		MPMX20_01232	0.44	-0.1
1,291,293	+		MPMX20_01232	0.44	-0.1
1,291,529	+		MPMX20_01232	0.55	+0.1
1,291,914	+		MPMX20_01232	0.73	+1.3
1,291,922	-		MPMX20_01232	0.74	+0.1
1,291,924	+		MPMX20_01232	0.74	+0.4
1,292,039	-		MPMX20_01232	0.79	+0.1
1,292,039	-		MPMX20_01232	0.79	-1.3
1,292,097	-		MPMX20_01232	0.82	-3.1
1,292,097	-		MPMX20_01232	0.82	+1.3
1,292,098	-		MPMX20_01232	0.82	-0.5
1,292,098	-		MPMX20_01232	0.82	+0.4
1,292,098	-		MPMX20_01232	0.82	-1.6
1,292,098	-		MPMX20_01232	0.82	-0.5
1,292,098	-		MPMX20_01232	0.82	-1.7
1,292,098	-		MPMX20_01232	0.82	+0.7
1,292,098	-		MPMX20_01232	0.82	-2.8
1,292,099	-		MPMX20_01232	0.82	-1.1
1,292,120	-		MPMX20_01232	0.83	-0.6
1,292,152	-		MPMX20_01232	0.85	-2.6
1,292,154	-		MPMX20_01232	0.85	-3.1
1,292,157	-		MPMX20_01232	0.85	-2.1
1,292,157	-		MPMX20_01232	0.85	-2.7
1,292,160	-		MPMX20_01232	0.85	-1.0
1,292,169	-		MPMX20_01232	0.86	-1.2
1,292,169	-		MPMX20_01232	0.86	+1.7
1,292,169	-		MPMX20_01232	0.86	-0.5
1,292,177	+		MPMX20_01232	0.86	-2.8
1,292,217	+		MPMX20_01232	0.88	-1.8
1,292,217	+		MPMX20_01232	0.88	-0.1
1,292,217	+		MPMX20_01232	0.88	-1.6
1,292,220	-		MPMX20_01232	0.88	-0.6
1,292,220	-		MPMX20_01232	0.88	-1.5
1,292,225	-		MPMX20_01232	0.88	-0.1
1,292,225	-		MPMX20_01232	0.88	+2.7
1,292,225	-		MPMX20_01232	0.88	+2.7
1,292,225	-		MPMX20_01232	0.88	+0.7
1,292,225	-		MPMX20_01232	0.88	-0.3
1,292,225	-		MPMX20_01232	0.88	-0.5
1,292,225	-		MPMX20_01232	0.88	-1.5
1,292,225	-		MPMX20_01232	0.88	+0.7
1,292,230	+		MPMX20_01232	0.88	-2.4
1,292,231	+		MPMX20_01232	0.88	-2.3
1,292,246	-		MPMX20_01232	0.89	-0.2
1,292,256	+		MPMX20_01232	0.90	-0.8
1,292,261	+		MPMX20_01232	0.90	+0.1
1,292,293	-				-0.6
1,292,298	-				-1.0
1,292,363	+				-1.3
1,292,363	+				-1.4
1,292,363	+				-0.9
1,292,370	+				-1.0
1,292,371	+				-0.3
1,292,381	+				+1.1
1,292,485	-				+0.7
1,292,526	+				-1.4
1,292,619	+				-0.6
1,292,710	+		MPMX20_01233	0.11	+1.7
1,292,711	+		MPMX20_01233	0.11	-0.9
1,292,711	+		MPMX20_01233	0.11	-0.3
1,292,718	-		MPMX20_01233	0.12	+1.7