Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00987

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
1,037,895	+				+2.4
1,037,903	-				-2.4
1,037,942	+				+0.4
1,037,942	+				-2.1
1,037,942	+				+0.5
1,037,942	+				+0.4
1,037,942	+				-0.5
1,037,942	+				+2.7
1,037,942	+				-0.4
1,037,942	+				+0.3
1,037,942	+				-1.1
1,037,942	+				-0.8
1,037,942	+				-0.8
1,037,942	+				-0.1
1,037,942	+				+0.1
1,037,942	+				-3.2
1,037,942	+				-1.6
1,037,942	+				-3.7
1,037,942	+				-0.3
1,037,942	+				+0.6
1,037,942	+				-2.0
1,037,942	+				-1.6
1,037,949	+				-1.9
1,037,949	+				+0.4
1,037,950	+				+1.7
1,037,950	-				-1.9
1,037,950	-				-2.7
1,037,950	-				-0.4
1,037,950	-				-0.5
1,037,950	-				-0.8
1,037,950	-				-0.6
1,037,950	-				-0.7
1,037,957	-				-0.9
1,037,962	-				-2.0
1,037,966	+				-1.4
1,037,966	+				-0.7
1,037,966	+				-2.5
1,037,966	+				+0.1
1,037,966	+				+0.1
1,037,966	+				-1.3
1,037,966	+				-3.0
1,037,966	+				-0.7
1,037,966	+				+0.5
1,037,974	-				+0.4
1,037,974	-				+0.7
1,037,991	+				-0.3
1,038,006	-				-2.1
1,038,027	-				+1.6
1,038,052	+				+0.7
1,038,053	+				+1.1
1,038,108	-				+0.6
1,038,135	+				+0.3
1,038,143	-				-1.3
1,038,143	-				-0.9
1,038,153	-				-0.0
1,038,160	-				-2.0
1,038,161	+				-2.0
1,038,169	-				-1.6
1,038,195	-				-0.6
1,038,204	+				+0.1
1,038,212	-				+0.1
1,038,222	-				+0.1
1,038,246	+		MPMX20_00986	0.13	+0.0
1,038,253	+		MPMX20_00986	0.14	+0.5
1,038,253	+		MPMX20_00986	0.14	-1.7
1,038,253	+		MPMX20_00986	0.14	+0.7
1,038,253	+		MPMX20_00986	0.14	-1.5
1,038,253	+		MPMX20_00986	0.14	-3.0
1,038,253	+		MPMX20_00986	0.14	-3.2
1,038,253	+		MPMX20_00986	0.14	+0.7
1,038,261	-		MPMX20_00986	0.16	+0.1
1,038,261	-		MPMX20_00986	0.16	-0.4
1,038,293	-		MPMX20_00986	0.20	+0.5
1,038,293	-		MPMX20_00986	0.20	-1.9
1,038,295	+		MPMX20_00986	0.20	+1.2
1,038,298	-		MPMX20_00986	0.21	+0.1
1,038,312	-		MPMX20_00986	0.23	-0.5
1,038,329	+		MPMX20_00986	0.25	+1.2
1,038,329	+		MPMX20_00986	0.25	+0.5
1,038,352	+		MPMX20_00986	0.29	-2.9
1,038,442	-		MPMX20_00986	0.42	-1.7
1,038,476	+		MPMX20_00986	0.47	-2.2
1,038,484	-		MPMX20_00986	0.48	+2.1
1,038,506	-		MPMX20_00986	0.51	+2.1
1,038,506	-		MPMX20_00986	0.51	-2.1
1,038,506	-		MPMX20_00986	0.51	-0.1
1,038,560	-		MPMX20_00986	0.59	-1.6
1,038,566	+		MPMX20_00986	0.60	+1.0
1,038,566	+		MPMX20_00986	0.60	-0.7
1,038,566	+		MPMX20_00986	0.60	-0.6
1,038,566	+		MPMX20_00986	0.60	-0.8
1,038,566	+		MPMX20_00986	0.60	-3.1
1,038,566	+		MPMX20_00986	0.60	-1.9
1,038,567	-		MPMX20_00986	0.60	-2.3
1,038,569	-		MPMX20_00986	0.60	+0.3
1,038,570	+		MPMX20_00986	0.60	+2.0
1,038,574	-		MPMX20_00986	0.61	+0.6
1,038,574	-		MPMX20_00986	0.61	-2.8
1,038,574	-		MPMX20_00986	0.61	+2.7
1,038,574	-		MPMX20_00986	0.61	-1.6
1,038,577	+		MPMX20_00986	0.61	+0.7
1,038,577	+		MPMX20_00986	0.61	-0.9
1,038,577	+		MPMX20_00986	0.61	+1.2
1,038,577	+		MPMX20_00986	0.61	+0.3
1,038,577	+		MPMX20_00986	0.61	+1.1
1,038,585	-		MPMX20_00986	0.62	+0.4
1,038,585	-		MPMX20_00986	0.62	+3.0
1,038,585	-		MPMX20_00986	0.62	-0.1
1,038,648	+		MPMX20_00986	0.72	+0.1
1,038,677	+		MPMX20_00986	0.76	+0.2
1,038,775	-				+0.2
1,038,790	-				+0.4
1,038,848	+				-1.9
1,038,896	+				-0.1
1,038,896	+				+0.7
1,038,896	+				-0.7
1,038,896	+				+1.2
1,038,904	-				-2.3
1,039,011	-		MPMX20_00987	0.11	-2.9
1,039,032	+		MPMX20_00987	0.13	+0.9
1,039,040	-		MPMX20_00987	0.14	-1.1
1,039,097	-		MPMX20_00987	0.18	-1.0
1,039,097	-		MPMX20_00987	0.18	-0.2
1,039,105	-		MPMX20_00987	0.19	+2.5
1,039,263	+		MPMX20_00987	0.31	+2.2
1,039,285	-		MPMX20_00987	0.32	-0.2
1,039,292	+		MPMX20_00987	0.33	+4.7
1,039,305	+		MPMX20_00987	0.34	-1.0
1,039,412	+		MPMX20_00987	0.42	+0.2
1,039,412	-		MPMX20_00987	0.42	-0.7
1,039,422	-		MPMX20_00987	0.43	+2.0
1,039,469	-		MPMX20_00987	0.47	+0.8
1,039,469	-		MPMX20_00987	0.47	+0.3
1,039,494	+		MPMX20_00987	0.49	-1.8
1,039,535	-		MPMX20_00987	0.52	-0.5
1,039,535	-		MPMX20_00987	0.52	+0.7
1,039,536	-		MPMX20_00987	0.52	+1.7
1,039,541	-		MPMX20_00987	0.52	-1.3
1,039,571	-		MPMX20_00987	0.54	-0.0
1,039,625	-		MPMX20_00987	0.59	+0.8
1,039,686	+		MPMX20_00987	0.63	-0.2
1,039,694	-		MPMX20_00987	0.64	-2.1
1,039,694	-		MPMX20_00987	0.64	+0.2
1,039,742	+		MPMX20_00987	0.68	+1.1
1,039,795	-		MPMX20_00987	0.72	-1.4
1,039,818	-		MPMX20_00987	0.74	+2.3
1,039,884	-		MPMX20_00987	0.79	+1.2
1,039,915	+		MPMX20_00987	0.81	+0.9
1,039,915	+		MPMX20_00987	0.81	+2.6
1,039,917	+		MPMX20_00987	0.81	-3.5
1,039,929	+		MPMX20_00987	0.82	+1.5
1,040,027	+		MPMX20_00987	0.90	+0.3
1,040,027	+		MPMX20_00987	0.90	+3.2
1,040,083	+				+0.7
1,040,097	+				-0.2
1,040,097	+				-2.5
1,040,097	+				-1.6
1,040,097	+				-1.5
1,040,097	+				-2.2
1,040,097	+				+1.3
1,040,097	+				-2.1
1,040,105	-				-2.0
1,040,105	-				-0.3
1,040,105	-				-0.1
1,040,105	-				-2.2
1,040,105	-				-0.3
1,040,105	-				-1.9
1,040,105	-				-1.2
1,040,105	-				+0.7
1,040,110	+				+0.3
1,040,125	-				-2.8
1,040,318	+				+1.7
1,040,372	+				+0.2
1,040,421	-				-2.0
1,040,425	-				+2.3
1,040,454	+				+1.0
1,040,603	+				-1.0
1,040,611	-				-1.1
1,040,619	+				-2.4
1,040,678	-				+0.3
1,040,689	+				-1.9
1,040,689	+				-1.0
1,040,689	+				-0.1
1,040,689	+				-0.0
1,040,689	+				+0.6
1,040,689	+				-0.8
1,040,697	-				-3.2
1,040,710	-		MPMX20_00988	0.11	-0.8
1,040,733	+		MPMX20_00988	0.12	+0.4
1,040,738	+		MPMX20_00988	0.13	-0.1
1,040,793	-		MPMX20_00988	0.17	+1.2
1,040,876	-		MPMX20_00988	0.23	+1.1
1,040,887	-		MPMX20_00988	0.24	+0.0
1,041,078	-		MPMX20_00988	0.38	-2.4
1,041,091	-		MPMX20_00988	0.39	-2.8