Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00107

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5
106,696	-		MPMX20_00106	0.11	-1.1
106,696	-		MPMX20_00106	0.11	+0.1
106,696	-		MPMX20_00106	0.11	-2.2
106,710	-		MPMX20_00106	0.13	-0.3
106,731	-		MPMX20_00106	0.14	-0.5
106,741	-		MPMX20_00106	0.15	-1.5
106,781	+		MPMX20_00106	0.19	+1.1
106,814	+		MPMX20_00106	0.22	-1.1
106,839	+		MPMX20_00106	0.24	-1.9
106,849	+		MPMX20_00106	0.25	-1.9
106,858	+		MPMX20_00106	0.26	-0.8
106,959	-		MPMX20_00106	0.35	-0.5
106,971	+		MPMX20_00106	0.36	-1.6
106,971	+		MPMX20_00106	0.36	+0.7
106,979	-		MPMX20_00106	0.36	+2.7
106,979	-		MPMX20_00106	0.36	+1.1
106,979	-		MPMX20_00106	0.36	+0.3
106,979	-		MPMX20_00106	0.36	+0.1
107,019	-		MPMX20_00106	0.40	+0.1
107,028	+		MPMX20_00106	0.41	-0.3
107,067	+		MPMX20_00106	0.44	-1.3
107,113	+		MPMX20_00106	0.48	+0.7
107,113	+		MPMX20_00106	0.48	+1.1
107,113	+		MPMX20_00106	0.48	-1.7
107,125	+		MPMX20_00106	0.49	+0.7
107,125	+		MPMX20_00106	0.49	+0.1
107,125	+		MPMX20_00106	0.49	-0.8
107,125	+		MPMX20_00106	0.49	+0.3
107,125	+		MPMX20_00106	0.49	-0.3
107,125	+		MPMX20_00106	0.49	-0.3
107,125	+		MPMX20_00106	0.49	-0.5
107,125	+		MPMX20_00106	0.49	-0.3
107,125	+		MPMX20_00106	0.49	+0.3
107,125	+		MPMX20_00106	0.49	-1.0
107,133	-		MPMX20_00106	0.50	-1.4
107,133	-		MPMX20_00106	0.50	+1.1
107,133	-		MPMX20_00106	0.50	+1.7
107,133	-		MPMX20_00106	0.50	-1.5
107,133	-		MPMX20_00106	0.50	-0.7
107,439	+		MPMX20_00106	0.77	-0.9
107,447	-		MPMX20_00106	0.78	+0.1
107,479	+		MPMX20_00106	0.81	-0.3
107,579	+		MPMX20_00106	0.90	-1.2
107,601	-				+0.7
107,699	+				-0.6
107,793	-				-1.7
107,887	+		MPMX20_00107	0.18	-2.8
108,046	-		MPMX20_00107	0.33	-1.9
108,063	+		MPMX20_00107	0.35	-2.5
108,075	+		MPMX20_00107	0.36	-0.9
108,083	-		MPMX20_00107	0.36	+1.7
108,083	-		MPMX20_00107	0.36	-0.5
108,113	-		MPMX20_00107	0.39	-0.3
108,140	-		MPMX20_00107	0.42	-0.1
108,152	-		MPMX20_00107	0.43	-0.8
108,188	+		MPMX20_00107	0.46	-0.1
108,188	+		MPMX20_00107	0.46	-1.8
108,232	-		MPMX20_00107	0.50	-2.6
108,318	-		MPMX20_00107	0.58	-0.8
108,403	+		MPMX20_00107	0.66	-0.9
108,413	-		MPMX20_00107	0.67	+0.7
108,440	-		MPMX20_00107	0.70	-1.1
108,459	+		MPMX20_00107	0.72	-2.5
108,473	+		MPMX20_00107	0.73	-0.3
108,494	-		MPMX20_00107	0.75	+0.7
108,494	-		MPMX20_00107	0.75	-0.4
108,507	-		MPMX20_00107	0.76	-1.6
108,525	+		MPMX20_00107	0.78	-0.7
108,551	-		MPMX20_00107	0.80	+0.7
108,555	+		MPMX20_00107	0.81	-1.9
108,571	-		MPMX20_00107	0.82	-1.6
108,737	-				+0.1
108,739	+				-0.3
108,755	-				-0.3
108,770	+				-2.5
108,770	+				-1.5
108,772	+				-0.3
108,772	+				+0.3
108,778	-				+1.3
108,815	-				-1.7
108,823	-				-0.1
108,850	+				-1.6
108,850	+				+1.0
108,850	+				-0.4
108,851	+				+0.7
108,858	-				+0.7
108,858	-				+0.5
108,858	-				-0.7
108,858	-				-0.7
108,858	-				+1.0
108,861	+				-1.6
108,861	+				-2.2
108,861	+				+0.2
108,867	-				-0.5
108,871	+				-1.1
108,871	+				-2.8
108,871	+				-2.3
108,873	+				-1.0
108,873	+				+0.1
108,879	-				-0.8
108,879	-				-1.8
108,879	-				-1.1
108,879	-				-0.7
108,879	-				-3.2
108,879	-				+0.1
108,881	-				+1.1
108,881	-				-2.5
108,881	-				-3.3
108,881	-				-0.8
108,881	-				-2.4
108,885	+				+0.1
108,886	-				-0.7
108,886	-				-0.3
108,886	-				+1.1
108,886	-				-0.5
108,891	-				-2.1
108,892	+				+1.9
108,898	-				+1.3
108,898	-				-1.9
108,960	-				-0.1
109,004	+				+1.7
109,013	-		MPMX20_00108	0.10	-2.2
109,132	-		MPMX20_00108	0.23	-1.1
109,139	+		MPMX20_00108	0.23	-3.7
109,172	+		MPMX20_00108	0.27	-2.1
109,272	+		MPMX20_00108	0.37	-1.3
109,337	+		MPMX20_00108	0.44	-0.5
109,354	+		MPMX20_00108	0.46	-0.1
109,374	+		MPMX20_00108	0.48	-1.4
109,376	-		MPMX20_00108	0.48	+0.7
109,385	+		MPMX20_00108	0.49	-0.9
109,385	+		MPMX20_00108	0.49	-0.1
109,393	-		MPMX20_00108	0.50	-1.8
109,393	-		MPMX20_00108	0.50	-2.4
109,393	-		MPMX20_00108	0.50	-0.4
109,393	-		MPMX20_00108	0.50	+0.3
109,420	+		MPMX20_00108	0.53	-0.1
109,425	+		MPMX20_00108	0.53	-0.5
109,428	-		MPMX20_00108	0.53	-3.0
109,449	+		MPMX20_00108	0.56	-3.0
109,454	+		MPMX20_00108	0.56	-0.3
109,454	+		MPMX20_00108	0.56	-0.3
109,509	-		MPMX20_00108	0.62	-3.5
109,522	+		MPMX20_00108	0.63	-1.9
109,530	-		MPMX20_00108	0.64	+1.1
109,530	-		MPMX20_00108	0.64	-0.3
109,546	+		MPMX20_00108	0.66	-1.7
109,557	+		MPMX20_00108	0.67	+3.5
109,557	+		MPMX20_00108	0.67	-4.5
109,557	+		MPMX20_00108	0.67	+0.7
109,557	+		MPMX20_00108	0.67	-2.3
109,557	+		MPMX20_00108	0.67	+3.2
109,557	+		MPMX20_00108	0.67	+0.3
109,557	+		MPMX20_00108	0.67	-3.8
109,565	+		MPMX20_00108	0.68	-1.6
109,565	+		MPMX20_00108	0.68	+0.7
109,565	+		MPMX20_00108	0.68	-1.2
109,565	+		MPMX20_00108	0.68	-1.0
109,565	+		MPMX20_00108	0.68	+1.1
109,565	+		MPMX20_00108	0.68	+3.2
109,565	+		MPMX20_00108	0.68	-2.3
109,565	+		MPMX20_00108	0.68	+1.7
109,565	+		MPMX20_00108	0.68	-2.5
109,565	+		MPMX20_00108	0.68	-1.1
109,565	+		MPMX20_00108	0.68	-0.5
109,565	+		MPMX20_00108	0.68	-4.2
109,565	+		MPMX20_00108	0.68	-2.9
109,565	+		MPMX20_00108	0.68	-0.3
109,565	+		MPMX20_00108	0.68	-0.6
109,565	+		MPMX20_00108	0.68	-3.5
109,565	+		MPMX20_00108	0.68	+0.1
109,565	+		MPMX20_00108	0.68	-0.7
109,565	+		MPMX20_00108	0.68	-0.1
109,565	+		MPMX20_00108	0.68	-1.5
109,565	+		MPMX20_00108	0.68	-2.5
109,565	-		MPMX20_00108	0.68	-0.3
109,565	-		MPMX20_00108	0.68	+0.5
109,565	-		MPMX20_00108	0.68	-3.6
109,573	-		MPMX20_00108	0.69	+0.3
109,573	-		MPMX20_00108	0.69	-1.1
109,573	-		MPMX20_00108	0.69	-1.1
109,573	-		MPMX20_00108	0.69	-0.5
109,573	-		MPMX20_00108	0.69	-3.2
109,573	-		MPMX20_00108	0.69	-1.0
109,573	-		MPMX20_00108	0.69	-2.3
109,573	-		MPMX20_00108	0.69	-1.0
109,573	-		MPMX20_00108	0.69	-0.1
109,573	-		MPMX20_00108	0.69	+1.7
109,573	-		MPMX20_00108	0.69	-0.5
109,573	-		MPMX20_00108	0.69	-3.3
109,575	+		MPMX20_00108	0.69	-3.2
109,575	+		MPMX20_00108	0.69	+0.1
109,575	+		MPMX20_00108	0.69	-4.0
109,575	+		MPMX20_00108	0.69	-0.7
109,575	+		MPMX20_00108	0.69	-1.5
109,575	+		MPMX20_00108	0.69	-1.2
109,575	+		MPMX20_00108	0.69	-3.2
109,575	+		MPMX20_00108	0.69	-2.9
109,580	+		MPMX20_00108	0.69	-3.2
109,580	+		MPMX20_00108	0.69	+0.7
109,580	+		MPMX20_00108	0.69	-3.7
109,580	+		MPMX20_00108	0.69	-2.7
109,580	+		MPMX20_00108	0.69	-1.3
109,580	+		MPMX20_00108	0.69	+1.7
109,583	-		MPMX20_00108	0.70	-2.1
109,588	-		MPMX20_00108	0.70	-2.8
109,588	-		MPMX20_00108	0.70	-0.1
109,588	-		MPMX20_00108	0.70	-1.6
109,588	-		MPMX20_00108	0.70	-1.8
109,588	-		MPMX20_00108	0.70	-2.0
109,588	-		MPMX20_00108	0.70	-3.0
109,602	-		MPMX20_00108	0.72	-0.1
109,622	+		MPMX20_00108	0.74	+0.7
109,622	+		MPMX20_00108	0.74	+0.8
109,622	+		MPMX20_00108	0.74	-1.3
109,630	-		MPMX20_00108	0.74	+2.7
109,630	-		MPMX20_00108	0.74	-3.3
109,630	-		MPMX20_00108	0.74	-3.6
109,637	+		MPMX20_00108	0.75	+3.7
109,637	+		MPMX20_00108	0.75	+0.3
109,637	+		MPMX20_00108	0.75	-3.6
109,645	-		MPMX20_00108	0.76	-2.9
109,645	-		MPMX20_00108	0.76	+0.7
109,656	+		MPMX20_00108	0.77	-0.2
109,656	+		MPMX20_00108	0.77	-1.7
109,656	+		MPMX20_00108	0.77	-2.2
109,656	+		MPMX20_00108	0.77	-3.4
109,656	+		MPMX20_00108	0.77	+0.6
109,656	+		MPMX20_00108	0.77	-1.6
109,656	+		MPMX20_00108	0.77	+0.8
109,662	+		MPMX20_00108	0.78	-2.0
109,664	-		MPMX20_00108	0.78	-0.9
109,664	-		MPMX20_00108	0.78	-0.1
109,664	-		MPMX20_00108	0.78	+0.7
109,664	-		MPMX20_00108	0.78	+0.1
109,669	+		MPMX20_00108	0.79	+2.7
109,669	+		MPMX20_00108	0.79	-4.2
109,670	-		MPMX20_00108	0.79	-0.4
109,684	-		MPMX20_00108	0.80	-3.1
109,694	-		MPMX20_00108	0.81	-1.2
109,749	+		MPMX20_00108	0.87	+1.7
109,749	+		MPMX20_00108	0.87	-2.9