Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04392

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
4,581,377	-				-1.4
4,581,396	+				+2.4
4,581,421	+				+2.8
4,581,421	+				+0.5
4,581,429	-				+0.6
4,581,484	-		MPMX20_04391	0.14	+0.4
4,581,485	+		MPMX20_04391	0.14	-0.3
4,581,485	+		MPMX20_04391	0.14	+1.6
4,581,493	-		MPMX20_04391	0.15	-0.3
4,581,493	-		MPMX20_04391	0.15	+1.3
4,581,524	-		MPMX20_04391	0.18	-0.5
4,581,605	-		MPMX20_04391	0.27	-0.1
4,581,605	-		MPMX20_04391	0.27	+0.1
4,581,605	-		MPMX20_04391	0.27	-1.0
4,581,607	-		MPMX20_04391	0.27	+0.0
4,581,647	-		MPMX20_04391	0.32	-0.9
4,581,687	+		MPMX20_04391	0.36	-1.1
4,581,745	+		MPMX20_04391	0.42	+0.0
4,581,746	+		MPMX20_04391	0.42	+0.4
4,581,754	-		MPMX20_04391	0.43	+2.0
4,581,758	+		MPMX20_04391	0.43	+1.0
4,581,759	+		MPMX20_04391	0.43	+0.4
4,581,766	-		MPMX20_04391	0.44	-3.3
4,581,787	+		MPMX20_04391	0.46	-1.4
4,581,787	+		MPMX20_04391	0.46	+0.2
4,581,787	+		MPMX20_04391	0.46	+1.1
4,581,787	+		MPMX20_04391	0.46	+2.0
4,581,789	-		MPMX20_04391	0.47	-1.4
4,581,795	-		MPMX20_04391	0.47	+1.2
4,581,795	-		MPMX20_04391	0.47	+0.9
4,581,795	-		MPMX20_04391	0.47	+0.2
4,581,811	+		MPMX20_04391	0.49	-0.2
4,581,811	-		MPMX20_04391	0.49	+1.0
4,581,884	+		MPMX20_04391	0.57	+0.1
4,581,884	+		MPMX20_04391	0.57	-0.2
4,581,884	+		MPMX20_04391	0.57	+0.1
4,581,884	+		MPMX20_04391	0.57	+0.3
4,581,889	+		MPMX20_04391	0.57	-0.8
4,581,889	+		MPMX20_04391	0.57	+0.6
4,581,892	-		MPMX20_04391	0.58	+0.4
4,581,892	-		MPMX20_04391	0.58	+0.5
4,581,892	-		MPMX20_04391	0.58	+0.6
4,581,897	-		MPMX20_04391	0.58	-2.9
4,581,899	+		MPMX20_04391	0.58	+0.0
4,581,937	-		MPMX20_04391	0.62	-1.4
4,581,942	+		MPMX20_04391	0.63	-1.0
4,581,951	+		MPMX20_04391	0.64	-0.7
4,581,951	+		MPMX20_04391	0.64	-0.5
4,581,970	-		MPMX20_04391	0.66	-0.4
4,581,971	-		MPMX20_04391	0.66	-1.3
4,581,996	+		MPMX20_04391	0.69	-1.0
4,582,011	-		MPMX20_04391	0.70	-0.2
4,582,011	-		MPMX20_04391	0.70	+0.8
4,582,103	+		MPMX20_04391	0.80	-0.1
4,582,103	+		MPMX20_04391	0.80	+0.8
4,582,106	-		MPMX20_04391	0.80	-0.4
4,582,108	+		MPMX20_04391	0.81	+0.0
4,582,108	+		MPMX20_04391	0.81	-2.6
4,582,111	-		MPMX20_04391	0.81	+0.2
4,582,113	+		MPMX20_04391	0.81	+0.4
4,582,113	+		MPMX20_04391	0.81	+0.5
4,582,113	+		MPMX20_04391	0.81	-1.0
4,582,116	-		MPMX20_04391	0.81	+0.1
4,582,123	+		MPMX20_04391	0.82	+0.7
4,582,131	-		MPMX20_04391	0.83	+0.1
4,582,131	-		MPMX20_04391	0.83	+1.1
4,582,131	-		MPMX20_04391	0.83	+2.0
4,582,154	+		MPMX20_04391	0.86	-0.8
4,582,234	-				+0.3
4,582,242	-				-0.3
4,582,266	+				-3.4
4,582,284	+				+0.3
4,582,321	-				+0.4
4,582,352	+				+2.4
4,582,354	+				-1.8
4,582,360	-				-0.7
4,582,403	+				+0.2
4,582,418	-				+5.7
4,582,461	-		MPMX20_04392	0.11	+0.0
4,582,465	-		MPMX20_04392	0.11	-1.6
4,582,491	-		MPMX20_04392	0.13	+0.3
4,582,540	+		MPMX20_04392	0.17	+0.1
4,582,568	-		MPMX20_04392	0.19	+0.2
4,582,638	-		MPMX20_04392	0.25	-0.1
4,582,661	+		MPMX20_04392	0.26	+0.1
4,582,669	-		MPMX20_04392	0.27	+0.4
4,582,751	-		MPMX20_04392	0.33	+0.3
4,582,867	-		MPMX20_04392	0.43	+0.3
4,582,869	+		MPMX20_04392	0.43	-1.0
4,582,874	-		MPMX20_04392	0.43	-0.6
4,582,902	+		MPMX20_04392	0.45	+0.9
4,582,923	+		MPMX20_04392	0.47	-0.5
4,582,931	-		MPMX20_04392	0.48	-0.3
4,582,931	-		MPMX20_04392	0.48	+1.6
4,582,956	-		MPMX20_04392	0.49	+0.6
4,583,008	-		MPMX20_04392	0.54	-1.5
4,583,016	-		MPMX20_04392	0.54	+0.4
4,583,021	-		MPMX20_04392	0.55	+0.8
4,583,035	+		MPMX20_04392	0.56	+0.5
4,583,043	-		MPMX20_04392	0.56	+1.4
4,583,094	+		MPMX20_04392	0.60	+0.9
4,583,094	+		MPMX20_04392	0.60	+1.1
4,583,094	+		MPMX20_04392	0.60	+1.1
4,583,094	+		MPMX20_04392	0.60	+1.2
4,583,094	+		MPMX20_04392	0.60	-0.6
4,583,102	-		MPMX20_04392	0.61	+0.2
4,583,102	-		MPMX20_04392	0.61	+1.0
4,583,102	-		MPMX20_04392	0.61	+1.1
4,583,102	-		MPMX20_04392	0.61	-1.5
4,583,107	-		MPMX20_04392	0.61	-1.1
4,583,208	+		MPMX20_04392	0.69	+0.5
4,583,266	+		MPMX20_04392	0.74	+0.1
4,583,379	+		MPMX20_04392	0.83	+0.2
4,583,423	-		MPMX20_04392	0.86	+0.7
4,583,477	-				+0.4
4,583,502	+				+1.9
4,583,510	-				+0.3
4,583,510	-				-1.2
4,583,567	+				-0.5
4,583,567	+				-2.5
4,583,575	-				+2.0
4,583,580	-				-0.5
4,583,699	+				+1.0
4,583,716	+				-0.6
4,583,716	+				+0.0
4,583,724	-				+0.6
4,583,724	-				+0.0
4,583,810	-				+0.0
4,583,819	+				-0.6
4,583,960	-		MPMX20_04393	0.14	+0.4
4,584,013	+		MPMX20_04393	0.18	-1.1
4,584,030	+		MPMX20_04393	0.19	-1.7
4,584,048	-		MPMX20_04393	0.20	+2.0
4,584,191	-		MPMX20_04393	0.30	+2.0
4,584,251	-		MPMX20_04393	0.34	+0.0
4,584,444	-		MPMX20_04393	0.46	-0.6
4,584,445	+		MPMX20_04393	0.46	-1.2
4,584,536	+		MPMX20_04393	0.53	-1.3
4,584,585	-		MPMX20_04393	0.56	+1.0
4,584,585	-		MPMX20_04393	0.56	+1.0