Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04135

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
4,334,268	-		MPMX20_04133	0.59	-0.6
4,334,296	-		MPMX20_04133	0.64	-1.0
4,334,363	-		MPMX20_04133	0.74	-1.7
4,334,449	+		MPMX20_04133	0.87	-3.2
4,334,457	-		MPMX20_04133	0.89	-2.1
4,334,457	-		MPMX20_04133	0.89	+2.0
4,334,575	-				-1.7
4,334,585	-				+0.3
4,334,699	+				-1.6
4,334,699	+				-0.7
4,334,699	+				+0.7
4,334,707	-				-0.6
4,334,707	-				+0.4
4,335,926	+				-1.1
4,335,931	+				-0.5
4,335,938	+				-0.5
4,335,950	-				-1.4
4,335,960	-				+0.4
4,335,960	-				-1.6
4,335,984	+				+0.4
4,335,984	+				+0.6
4,336,058	+				-0.8
4,336,058	+				-3.8
4,336,058	+				-0.4
4,336,058	+				+0.4
4,336,066	-				-1.3
4,336,066	-				-0.2
4,336,066	-				+1.0
4,336,066	-				+2.7
4,336,066	-				-1.6
4,336,066	-				-1.4
4,336,066	-				-0.8
4,336,072	+				-0.2
4,336,101	+		MPMX20_04136	0.12	-1.7
4,336,165	-		MPMX20_04136	0.18	-2.8
4,336,167	-		MPMX20_04136	0.18	-3.0
4,336,192	-		MPMX20_04136	0.20	-1.8
4,336,194	+		MPMX20_04136	0.20	-1.6
4,336,248	+		MPMX20_04136	0.25	-1.0
4,336,248	+		MPMX20_04136	0.25	-2.6
4,336,256	-		MPMX20_04136	0.26	+2.0
4,336,271	-		MPMX20_04136	0.27	-0.3
4,336,298	+		MPMX20_04136	0.29	-1.8
4,336,304	-		MPMX20_04136	0.30	-2.6
4,336,320	+		MPMX20_04136	0.31	-3.3
4,336,333	-		MPMX20_04136	0.33	-2.1
4,336,404	+		MPMX20_04136	0.39	+0.4
4,336,494	+		MPMX20_04136	0.47	-3.3
4,336,531	+		MPMX20_04136	0.50	-0.7
4,336,539	-		MPMX20_04136	0.51	-1.2
4,336,539	-		MPMX20_04136	0.51	-2.9
4,336,539	-		MPMX20_04136	0.51	-0.5
4,336,539	-		MPMX20_04136	0.51	-2.2
4,336,584	+		MPMX20_04136	0.55	+2.0
4,336,584	+		MPMX20_04136	0.55	-1.7
4,336,584	+		MPMX20_04136	0.55	-0.3
4,336,584	+		MPMX20_04136	0.55	+1.2
4,336,584	+		MPMX20_04136	0.55	-2.4
4,336,586	-		MPMX20_04136	0.55	-0.8
4,336,592	-		MPMX20_04136	0.56	-2.1
4,336,607	+		MPMX20_04136	0.57	-0.3
4,336,607	+		MPMX20_04136	0.57	-0.3
4,336,615	-		MPMX20_04136	0.58	-2.7
4,336,672	+		MPMX20_04136	0.63	-2.2