Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04041

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
4,237,786	+		MPMX20_04039	0.65	-0.9
4,237,794	-		MPMX20_04039	0.66	+0.3
4,237,802	+		MPMX20_04039	0.66	-0.4
4,237,802	+		MPMX20_04039	0.66	+0.1
4,237,809	+		MPMX20_04039	0.67	-1.0
4,237,809	+		MPMX20_04039	0.67	+0.6
4,237,809	+		MPMX20_04039	0.67	-0.8
4,237,809	+		MPMX20_04039	0.67	+1.6
4,237,809	+		MPMX20_04039	0.67	+1.4
4,237,809	+		MPMX20_04039	0.67	-1.2
4,237,810	-		MPMX20_04039	0.67	+1.0
4,237,810	-		MPMX20_04039	0.67	+0.6
4,237,817	-		MPMX20_04039	0.68	-0.1
4,237,817	-		MPMX20_04039	0.68	+0.9
4,237,817	-		MPMX20_04039	0.68	-0.7
4,237,817	-		MPMX20_04039	0.68	+0.4
4,237,817	-		MPMX20_04039	0.68	-0.7
4,237,817	-		MPMX20_04039	0.68	+0.1
4,237,819	+		MPMX20_04039	0.68	-0.8
4,237,856	+		MPMX20_04039	0.71	-1.4
4,237,878	+		MPMX20_04039	0.72	-0.2
4,237,883	+		MPMX20_04039	0.73	-0.4
4,237,886	-		MPMX20_04039	0.73	-1.5
4,237,896	-		MPMX20_04039	0.74	+0.4
4,237,896	-		MPMX20_04039	0.74	+0.5
4,237,987	-		MPMX20_04039	0.81	+0.6
4,237,988	-		MPMX20_04039	0.81	+0.6
4,237,988	-		MPMX20_04039	0.81	-0.8
4,237,988	-		MPMX20_04039	0.81	+0.5
4,238,011	-		MPMX20_04039	0.83	+1.4
4,238,084	+		MPMX20_04039	0.88	-1.1
4,238,158	+				-0.4
4,238,192	-				-2.2
4,238,268	+				-0.3
4,238,268	+				-2.6
4,238,276	-				-0.1
4,238,334	-		MPMX20_04040	0.16	+1.1
4,238,349	-		MPMX20_04040	0.20	-0.0
4,238,349	-		MPMX20_04040	0.20	-1.4
4,238,359	-		MPMX20_04040	0.22	+0.6
4,238,539	-		MPMX20_04040	0.60	+1.0
4,238,555	-		MPMX20_04040	0.63	+0.4
4,238,703	+				-0.6
4,238,714	+				+1.4
4,238,721	-				+2.5
4,238,721	-				-0.0
4,238,750	-				-0.3
4,238,794	+				-0.3
4,238,794	+				+1.5
4,238,813	+				+1.0
4,238,821	+		MPMX20_04041	0.10	+0.2
4,238,821	-		MPMX20_04041	0.10	+2.0
4,238,831	+		MPMX20_04041	0.12	-0.2
4,238,839	-		MPMX20_04041	0.13	+0.4
4,238,839	-		MPMX20_04041	0.13	+1.3
4,238,858	+		MPMX20_04041	0.15	-2.3
4,238,863	+		MPMX20_04041	0.16	+1.4
4,238,866	-		MPMX20_04041	0.16	+0.3
4,238,918	+		MPMX20_04041	0.23	-1.0
4,238,921	-		MPMX20_04041	0.23	-0.1
4,238,921	-		MPMX20_04041	0.23	+1.8
4,239,090	+		MPMX20_04041	0.45	+0.6
4,239,474	+				+0.5
4,239,533	-				-0.0
4,239,552	+				+1.1
4,239,634	+		MPMX20_04042	0.14	-2.4
4,239,727	+		MPMX20_04042	0.25	-0.3
4,239,752	+		MPMX20_04042	0.28	-1.5
4,239,760	-		MPMX20_04042	0.29	-0.2
4,239,760	-		MPMX20_04042	0.29	-0.0
4,239,760	-		MPMX20_04042	0.29	+1.0
4,239,765	-		MPMX20_04042	0.29	+1.4
4,239,774	+		MPMX20_04042	0.30	+0.7
4,239,782	+		MPMX20_04042	0.31	-0.1
4,239,857	+		MPMX20_04042	0.40	+0.5
4,239,884	-		MPMX20_04042	0.43	+0.6
4,239,925	+		MPMX20_04042	0.47	-2.0
4,239,925	+		MPMX20_04042	0.47	+0.5
4,239,930	+		MPMX20_04042	0.48	-0.5
4,239,930	+		MPMX20_04042	0.48	-0.8
4,239,933	-		MPMX20_04042	0.48	+0.4
4,239,963	+		MPMX20_04042	0.52	-0.6
4,239,963	+		MPMX20_04042	0.52	-0.4
4,239,977	-		MPMX20_04042	0.53	+3.8
4,239,977	-		MPMX20_04042	0.53	+1.0
4,239,992	-		MPMX20_04042	0.55	-1.9
4,240,016	-		MPMX20_04042	0.58	-0.1
4,240,018	+		MPMX20_04042	0.58	+2.7
4,240,018	+		MPMX20_04042	0.58	-0.0
4,240,018	+		MPMX20_04042	0.58	+1.7
4,240,018	+		MPMX20_04042	0.58	-0.4
4,240,018	+		MPMX20_04042	0.58	-0.1
4,240,018	+		MPMX20_04042	0.58	-1.7
4,240,018	+		MPMX20_04042	0.58	-0.4
4,240,018	+		MPMX20_04042	0.58	+0.4
4,240,018	+		MPMX20_04042	0.58	-0.9
4,240,018	+		MPMX20_04042	0.58	-2.5
4,240,018	+		MPMX20_04042	0.58	-0.7
4,240,018	+		MPMX20_04042	0.58	+0.0
4,240,018	+		MPMX20_04042	0.58	-0.7
4,240,026	-		MPMX20_04042	0.59	-1.0
4,240,026	-		MPMX20_04042	0.59	+0.2
4,240,026	-		MPMX20_04042	0.59	-1.6
4,240,026	-		MPMX20_04042	0.59	+1.2
4,240,026	-		MPMX20_04042	0.59	-1.7
4,240,026	-		MPMX20_04042	0.59	+1.1
4,240,026	-		MPMX20_04042	0.59	-1.6
4,240,026	-		MPMX20_04042	0.59	+1.4
4,240,026	-		MPMX20_04042	0.59	+1.4
4,240,026	-		MPMX20_04042	0.59	-0.3
4,240,026	-		MPMX20_04042	0.59	-0.0
4,240,026	-		MPMX20_04042	0.59	-1.8
4,240,096	+		MPMX20_04042	0.67	+0.6
4,240,096	+		MPMX20_04042	0.67	-0.8
4,240,096	+		MPMX20_04042	0.67	-0.5
4,240,096	+		MPMX20_04042	0.67	+0.5
4,240,104	-		MPMX20_04042	0.68	-0.2
4,240,122	+		MPMX20_04042	0.70	+0.8
4,240,130	+		MPMX20_04042	0.71	+1.1
4,240,137	+		MPMX20_04042	0.71	+1.4
4,240,181	+		MPMX20_04042	0.76	-1.0
4,240,183	+		MPMX20_04042	0.77	+0.3
4,240,189	-		MPMX20_04042	0.77	-0.2
4,240,189	-		MPMX20_04042	0.77	-1.5
4,240,201	+		MPMX20_04042	0.79	+0.9
4,240,252	+		MPMX20_04042	0.85	+0.4
4,240,276	+		MPMX20_04042	0.87	-0.8
4,240,276	+		MPMX20_04042	0.87	+0.8
4,240,277	+		MPMX20_04042	0.87	-1.0
4,240,278	+		MPMX20_04042	0.87	+0.1
4,240,284	-		MPMX20_04042	0.88	-1.4
4,240,284	-		MPMX20_04042	0.88	-2.0
4,240,284	-		MPMX20_04042	0.88	+0.4
4,240,284	-		MPMX20_04042	0.88	+0.5
4,240,284	-		MPMX20_04042	0.88	+3.0
4,240,284	-		MPMX20_04042	0.88	+0.6
4,240,284	-		MPMX20_04042	0.88	+3.4
4,240,284	-		MPMX20_04042	0.88	-0.3
4,240,285	-		MPMX20_04042	0.88	+0.9
4,240,286	-		MPMX20_04042	0.88	-1.4
4,240,322	-				+0.6
4,240,344	+				-0.4
4,240,344	+				-0.6
4,240,369	+				+0.4
4,240,369	+				+0.7
4,240,397	-				-0.6
4,240,446	+				+0.3
4,240,454	-		MPMX20_04043	0.12	+1.0
4,240,497	-		MPMX20_04043	0.22	+1.0