Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03420

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,603,689	+		MPMX20_03418	0.70	-0.5
3,603,698	+		MPMX20_03418	0.70	+0.1
3,603,723	+		MPMX20_03418	0.73	+1.7
3,603,723	+		MPMX20_03418	0.73	-0.9
3,603,785	+		MPMX20_03418	0.78	-1.4
3,603,793	-		MPMX20_03418	0.79	-0.3
3,603,796	+		MPMX20_03418	0.79	-1.0
3,603,821	+		MPMX20_03418	0.81	+1.5
3,603,896	+		MPMX20_03418	0.88	-0.9
3,603,896	+		MPMX20_03418	0.88	+0.9
3,603,939	+				-3.4
3,603,939	+				+0.1
3,603,944	+				-1.3
3,603,953	+				-1.3
3,603,998	+				-0.2
3,604,005	+				+0.4
3,604,005	+				-0.2
3,604,032	-				-1.5
3,604,041	-				+0.3
3,604,137	+				-0.1
3,604,145	-				-0.4
3,604,150	-				-1.8
3,604,243	+				-0.2
3,604,243	+				-0.7
3,604,259	-		MPMX20_03419	0.12	-0.4
3,604,267	-		MPMX20_03419	0.14	-3.8
3,604,267	-		MPMX20_03419	0.14	-1.3
3,604,306	+		MPMX20_03419	0.23	+1.1
3,604,306	+		MPMX20_03419	0.23	-0.0
3,604,306	+		MPMX20_03419	0.23	+0.3
3,604,316	+		MPMX20_03419	0.25	+0.6
3,604,322	+		MPMX20_03419	0.27	+0.2
3,604,348	-		MPMX20_03419	0.33	-0.1
3,604,355	+		MPMX20_03419	0.35	+1.8
3,604,355	+		MPMX20_03419	0.35	-0.6
3,604,355	+		MPMX20_03419	0.35	-1.7
3,604,355	+		MPMX20_03419	0.35	-0.6
3,604,355	+		MPMX20_03419	0.35	-0.6
3,604,355	+		MPMX20_03419	0.35	+0.0
3,604,355	+		MPMX20_03419	0.35	-3.0
3,604,355	+		MPMX20_03419	0.35	+0.6
3,604,355	+		MPMX20_03419	0.35	-0.2
3,604,355	+		MPMX20_03419	0.35	+0.1
3,604,355	+		MPMX20_03419	0.35	+0.0
3,604,357	+		MPMX20_03419	0.35	+0.1
3,604,360	-		MPMX20_03419	0.36	-2.2
3,604,362	+		MPMX20_03419	0.36	-1.3
3,604,363	-		MPMX20_03419	0.36	-2.5
3,604,363	-		MPMX20_03419	0.36	-0.9
3,604,363	-		MPMX20_03419	0.36	-0.1
3,604,363	-		MPMX20_03419	0.36	-1.7
3,604,363	-		MPMX20_03419	0.36	-0.0
3,604,363	-		MPMX20_03419	0.36	-2.9
3,604,363	-		MPMX20_03419	0.36	-1.3
3,604,363	-		MPMX20_03419	0.36	-0.6
3,604,369	-		MPMX20_03419	0.38	-0.3
3,604,370	-		MPMX20_03419	0.38	-1.8
3,604,394	+		MPMX20_03419	0.44	-1.9
3,604,396	+		MPMX20_03419	0.44	+1.5
3,604,401	-		MPMX20_03419	0.45	-1.8
3,604,411	+		MPMX20_03419	0.48	+0.2
3,604,445	+		MPMX20_03419	0.56	-2.9
3,604,460	-		MPMX20_03419	0.59	-0.7
3,604,460	-		MPMX20_03419	0.59	-1.3
3,604,460	-		MPMX20_03419	0.59	-1.6
3,604,465	-		MPMX20_03419	0.61	-2.7
3,604,494	+		MPMX20_03419	0.67	-1.2
3,604,499	+		MPMX20_03419	0.69	-1.8
3,604,502	+		MPMX20_03419	0.69	-1.6
3,604,504	+		MPMX20_03419	0.70	-1.0
3,604,507	-		MPMX20_03419	0.70	+0.2
3,604,519	+		MPMX20_03419	0.73	-0.1
3,604,519	+		MPMX20_03419	0.73	-0.1
3,604,544	-		MPMX20_03419	0.79	-1.4
3,604,575	+		MPMX20_03419	0.87	+0.7
3,604,615	+				+3.2
3,604,615	+				-0.8
3,604,615	+				-0.1
3,604,615	+				+0.2
3,604,618	-				-1.1
3,604,623	-				-0.4
3,604,623	-				+0.1
3,604,623	-				-0.4
3,604,623	-				+0.4
3,604,623	-				-2.9
3,604,623	-				+1.6
3,604,623	-				-1.6
3,604,625	+				-0.4
3,604,625	+				-0.4
3,604,625	+				-1.1
3,604,625	+				-0.3
3,604,633	-				+0.1
3,604,633	-				-2.8
3,604,633	-				-1.6
3,604,633	-				-0.2
3,604,633	-				+0.7
3,604,633	-				-0.8
3,604,633	-				+0.2
3,604,692	-				+0.2
3,604,697	-				-4.0
3,604,704	-				-3.9
3,606,009	+				-1.5
3,606,009	+				-2.4
3,606,009	+				+0.4
3,606,009	+				+1.9
3,606,019	+				-1.1
3,606,019	-				+0.3
3,606,141	-				-0.0
3,606,249	-				+0.3
3,606,353	-				-0.9
3,606,417	-		MPMX20_03421	0.15	+1.0
3,606,422	-		MPMX20_03421	0.15	-0.3
3,606,518	-		MPMX20_03421	0.23	+0.4
3,606,518	-		MPMX20_03421	0.23	-0.0
3,606,518	-		MPMX20_03421	0.23	-0.4
3,606,525	+		MPMX20_03421	0.24	+0.1
3,606,525	+		MPMX20_03421	0.24	-0.2
3,606,557	+		MPMX20_03421	0.26	-0.5
3,606,560	-		MPMX20_03421	0.27	+0.3
3,606,570	+		MPMX20_03421	0.27	+0.3
3,606,580	+		MPMX20_03421	0.28	-0.4
3,606,580	+		MPMX20_03421	0.28	+0.3
3,606,580	+		MPMX20_03421	0.28	+0.0
3,606,588	-		MPMX20_03421	0.29	+1.2
3,606,589	-		MPMX20_03421	0.29	-3.3
3,606,624	+		MPMX20_03421	0.32	-1.4
3,606,654	+		MPMX20_03421	0.34	+1.0
3,606,731	+		MPMX20_03421	0.41	+1.5
3,606,739	+		MPMX20_03421	0.42	+0.7
3,606,814	-		MPMX20_03421	0.48	+1.4
3,606,824	+		MPMX20_03421	0.49	-2.2
3,606,870	-		MPMX20_03421	0.53	-2.9
3,606,909	-		MPMX20_03421	0.56	+1.3