Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03239

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,409,253	+		MPMX20_03237	0.15	+0.6
3,409,253	+		MPMX20_03237	0.15	+0.5
3,409,261	-		MPMX20_03237	0.16	+0.0
3,409,273	+		MPMX20_03237	0.18	-0.6
3,409,281	-		MPMX20_03237	0.19	-1.1
3,409,281	-		MPMX20_03237	0.19	+2.9
3,409,281	-		MPMX20_03237	0.19	-1.4
3,409,306	+		MPMX20_03237	0.23	-2.0
3,409,390	-		MPMX20_03237	0.37	+0.9
3,409,422	+		MPMX20_03237	0.42	-2.3
3,409,422	+		MPMX20_03237	0.42	-1.0
3,409,422	+		MPMX20_03237	0.42	-1.6
3,409,430	-		MPMX20_03237	0.43	-3.5
3,409,479	+		MPMX20_03237	0.51	-1.4
3,409,487	-		MPMX20_03237	0.52	+0.5
3,409,507	+		MPMX20_03237	0.55	+0.3
3,409,584	-		MPMX20_03237	0.67	-0.3
3,409,586	+		MPMX20_03237	0.68	-1.6
3,409,594	-		MPMX20_03237	0.69	+0.4
3,409,594	-		MPMX20_03237	0.69	-2.9
3,409,674	-		MPMX20_03237	0.82	-1.1
3,409,712	+		MPMX20_03237	0.88	-0.3
3,409,745	+				+0.7
3,409,753	-				+0.8
3,409,753	-				-0.0
3,409,800	+				+1.7
3,409,813	-				+0.6
3,409,824	+				+1.9
3,409,827	-				+1.8
3,409,827	-				-0.2
3,409,851	+				+0.4
3,409,864	-				-0.2
3,409,930	+		MPMX20_03238	0.18	+1.9
3,409,955	-		MPMX20_03238	0.25	+1.1
3,409,971	+		MPMX20_03238	0.29	+0.6
3,409,998	-		MPMX20_03238	0.36	-1.3
3,410,031	+		MPMX20_03238	0.45	+1.1
3,410,036	-		MPMX20_03238	0.47	+0.9
3,410,073	-		MPMX20_03238	0.57	+1.2
3,410,151	-		MPMX20_03238	0.78	-0.6
3,410,152	+		MPMX20_03238	0.78	-1.4
3,410,179	-		MPMX20_03238	0.85	+0.8
3,410,181	+		MPMX20_03238	0.86	+0.2
3,410,181	+		MPMX20_03238	0.86	-0.4
3,410,189	-		MPMX20_03238	0.88	-0.9
3,410,189	-		MPMX20_03238	0.88	+0.9
3,410,189	-		MPMX20_03238	0.88	-0.4
3,410,189	-		MPMX20_03238	0.88	+1.0
3,410,221	+				+0.2
3,410,221	+				-0.8
3,410,240	-				-2.2
3,410,461	-		MPMX20_03239	0.24	-2.1
3,410,467	+		MPMX20_03239	0.25	-3.0
3,410,550	+		MPMX20_03239	0.34	-3.4
3,410,550	+		MPMX20_03239	0.34	-4.1
3,410,599	-		MPMX20_03239	0.39	+0.9
3,410,633	-		MPMX20_03239	0.43	-1.8
3,410,647	+		MPMX20_03239	0.45	+0.3
3,410,689	-		MPMX20_03239	0.50	-2.8
3,410,691	+		MPMX20_03239	0.50	-0.7
3,410,704	-		MPMX20_03239	0.51	-3.8
3,410,711	+		MPMX20_03239	0.52	-3.0
3,410,711	-		MPMX20_03239	0.52	-0.9
3,410,842	-		MPMX20_03239	0.67	-1.3
3,410,882	+		MPMX20_03239	0.71	-3.1
3,410,889	-		MPMX20_03239	0.72	-1.6
3,410,920	-		MPMX20_03239	0.75	-2.6
3,410,930	-		MPMX20_03239	0.77	-0.1
3,410,958	+		MPMX20_03239	0.80	-2.6
3,411,069	+				-2.6
3,411,138	-				-2.7
3,411,279	+				-3.8
3,411,279	+				+2.4
3,411,279	+				+0.3
3,411,287	-				+0.2
3,411,331	+		MPMX20_03240	0.14	+0.8
3,411,333	+		MPMX20_03240	0.14	+0.5
3,411,341	-		MPMX20_03240	0.16	+0.4
3,411,443	+		MPMX20_03240	0.41	+1.4
3,411,473	-		MPMX20_03240	0.48	-0.1
3,411,482	+		MPMX20_03240	0.50	-1.3
3,411,499	+		MPMX20_03240	0.54	-0.1
3,411,535	-		MPMX20_03240	0.63	-0.4
3,411,633	+		MPMX20_03240	0.86	-0.3
3,411,684	+				+0.6
3,411,697	-				-2.5
3,411,818	-		MPMX20_03241	0.10	-0.3
3,411,941	-		MPMX20_03241	0.26	+0.3
3,411,941	-		MPMX20_03241	0.26	-0.9
3,412,085	+		MPMX20_03241	0.45	+1.6
3,412,107	+		MPMX20_03241	0.48	+1.9