Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03075

Experiment: Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4
3,224,241	+				+1.8
3,224,258	-				+0.5
3,224,307	+				+1.0
3,224,339	-				-1.2
3,224,339	-				-0.5
3,224,339	-				+0.3
3,224,339	-				+0.5
3,224,339	-				+0.3
3,224,365	+				+0.6
3,224,367	+				-0.9
3,224,375	-				+1.0
3,224,402	+				+0.2
3,224,402	+				-0.0
3,224,402	+				-1.0
3,224,402	+				-0.0
3,224,410	-		MPMX20_03074	0.10	+0.9
3,224,410	-		MPMX20_03074	0.10	-0.0
3,224,410	-		MPMX20_03074	0.10	-0.7
3,224,410	-		MPMX20_03074	0.10	+0.9
3,224,412	+		MPMX20_03074	0.11	+1.6
3,224,412	+		MPMX20_03074	0.11	+0.3
3,224,542	-		MPMX20_03074	0.24	-0.4
3,224,554	-		MPMX20_03074	0.25	+0.2
3,224,589	-		MPMX20_03074	0.29	-0.5
3,224,589	-		MPMX20_03074	0.29	+0.4
3,224,627	+		MPMX20_03074	0.33	+0.5
3,224,660	+		MPMX20_03074	0.37	+0.8
3,224,660	+		MPMX20_03074	0.37	-0.8
3,224,668	-		MPMX20_03074	0.37	+0.3
3,224,668	-		MPMX20_03074	0.37	-1.5
3,224,705	+		MPMX20_03074	0.41	-3.3
3,224,713	-		MPMX20_03074	0.42	-1.2
3,224,772	-		MPMX20_03074	0.48	-0.1
3,224,789	-		MPMX20_03074	0.50	-2.3
3,224,831	+		MPMX20_03074	0.55	-1.5
3,224,831	+		MPMX20_03074	0.55	-0.5
3,224,885	-		MPMX20_03074	0.60	-0.6
3,224,983	-		MPMX20_03074	0.70	+1.9
3,225,026	-		MPMX20_03074	0.75	-0.6
3,225,033	+		MPMX20_03074	0.76	+1.1
3,225,041	-		MPMX20_03074	0.77	+0.3
3,225,041	-		MPMX20_03074	0.77	+0.5
3,225,100	+		MPMX20_03074	0.83	-0.4
3,225,161	+		MPMX20_03074	0.89	-0.5
3,225,169	-				-0.0
3,225,235	+				-0.3
3,225,235	+				-1.4
3,225,235	+				-0.1
3,225,235	+				+1.2
3,225,243	-				-2.5
3,225,258	-				+2.6
3,225,274	+				+4.2
3,225,405	+		MPMX20_03075	0.22	+2.4
3,225,503	+		MPMX20_03075	0.35	+1.5
3,225,511	-		MPMX20_03075	0.37	+2.2
3,225,511	-		MPMX20_03075	0.37	+2.0
3,225,592	-		MPMX20_03075	0.47	+2.2
3,225,696	+		MPMX20_03075	0.61	+1.5
3,225,740	-		MPMX20_03075	0.67	+3.4
3,225,793	-		MPMX20_03075	0.74	+3.3
3,225,820	-		MPMX20_03075	0.78	+1.3
3,225,846	+		MPMX20_03075	0.81	+2.3
3,225,846	+		MPMX20_03075	0.81	+1.0
3,225,861	+		MPMX20_03075	0.83	+2.2
3,225,861	+		MPMX20_03075	0.83	+1.8
3,225,999	+				+1.3
3,226,004	+				+1.5
3,226,007	-				-2.5
3,226,018	+				+5.3
3,226,026	-				+1.9
3,226,026	-				+1.2
3,226,056	+				-1.8
3,226,064	-				+0.3
3,226,064	-				-4.2
3,226,074	+				-2.8
3,226,214	+		MPMX20_03076	0.23	-1.4
3,226,298	+		MPMX20_03076	0.34	-1.5
3,226,306	-		MPMX20_03076	0.35	-1.2
3,226,306	-		MPMX20_03076	0.35	-4.1
3,226,365	+		MPMX20_03076	0.42	-4.8
3,226,373	-		MPMX20_03076	0.43	-1.7
3,226,408	-		MPMX20_03076	0.48	-0.4
3,226,408	-		MPMX20_03076	0.48	-3.4
3,226,408	-		MPMX20_03076	0.48	-4.0
3,226,410	+		MPMX20_03076	0.48	-3.0
3,226,410	+		MPMX20_03076	0.48	-3.3
3,226,418	-		MPMX20_03076	0.49	-2.0
3,226,418	-		MPMX20_03076	0.49	-2.3
3,226,511	-		MPMX20_03076	0.60	-1.2
3,226,513	+		MPMX20_03076	0.61	-2.1
3,226,521	-		MPMX20_03076	0.62	-0.7
3,226,521	-		MPMX20_03076	0.62	-2.8
3,226,541	+		MPMX20_03076	0.64	-2.4
3,226,541	+		MPMX20_03076	0.64	-3.2
3,226,541	-		MPMX20_03076	0.64	+1.9
3,226,549	-		MPMX20_03076	0.65	-1.2
3,226,549	-		MPMX20_03076	0.65	-3.1
3,226,577	+		MPMX20_03076	0.69	-2.3
3,226,716	+		MPMX20_03076	0.86	-3.4
3,226,759	-				-2.2
3,226,835	+				-2.5
3,226,843	+				+0.8
3,226,843	+				+0.3
3,226,851	-				-0.0
3,226,851	-				+1.0
3,226,877	-				-1.7
3,226,918	+		MPMX20_03077	0.12	+1.3